CX043676

Overview
NameCX043676
Unique NameCX043676
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length785
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043676 vs. ExPASy Swiss-Prot
Match: FEM1B_DROME (Protein fem-1 homolog B OS=Drosophila melanogaster GN=Fem-1 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.572e-11
Identity = 57/177 (32.20%), Postives = 86/177 (48.59%), Query Frame = 3
Query:  255 TELHLAAQRGDLGAVKQILYGIDSQMVGNLSGAEFDTEVAEIRSSVVNEVNELGETALFTAADKGHIEVLNELLKYSTKEGLTRKNRSGFDPLHIAAVKGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALL 785
            T L +AA  G++  VK +L   D          + D E   I   +V      G TAL+ AA  GH++++  L++      +    ++   PL  A  +G   IV+ L+D+   ++ T   +N T L+ AA +GH  VV  LL ++G         G  ALH+AA  GH+DVV ALL
Sbjct:   51 TPLTMAAMMGNVKFVKTLLSHYD---------VDLDRECNVIYDGMV----VYGATALWVAAGMGHLQIVKMLVQAGA--AINHNTKAQSSPLRAACYEGRLDIVEFLIDNGADVNATNLFNNNT-LMIAAYKGHHLVVKTLL-QNGSRANDQALCGATALHYAAESGHLDVVVALL 210          
BLAST of CX043676 vs. ExPASy Swiss-Prot
Match: INVSA_XENLA (Inversin-A OS=Xenopus laevis GN=invs-A PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.053e-11
Identity = 52/160 (32.50%), Postives = 81/160 (50.62%), Query Frame = 3
Query:  312 YGIDSQMVGNLSGAEFDTEVAEIRSSVVNEVNELGETALFTAADKGHIEVLNELLKYSTKEGLTRKNRSGFDPLHIAAVKGHHAIVQVLLDH--DPSLSQTTGPSNATPLVSAATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALL 785
            YG  +    +LSG      +       V+ V+ +  TALF A + GH EV++ L+K   K  L  K+  G  PLH AA+ G+  + Q+L+++  +P      G    TPL  AA  G+   + E+L ++     I   NG+ ALH++   G++D VK LL
Sbjct:  352 YGGTALHAASLSGQITTVRILLENRVQVDAVDVMKHTALFRACEMGHREVISTLIKGGAKVHLVDKD--GRSPLHWAALGGNANVCQILIENNINPDAQDYEG---RTPLQCAAYGGYIGCM-EVLMENKADPNIQDKNGRTALHWSCNNGYLDAVKLLL 505          
BLAST of CX043676 vs. ExPASy Swiss-Prot
Match: TANC2_MOUSE (Protein TANC2 OS=Mus musculus GN=Tanc2 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.682e-11
Identity = 46/138 (33.33%), Postives = 73/138 (52.90%), Query Frame = 3
Query:  375 EIRSSVVNEVNEL-GETALFTAADKGHIEVLNELLKYSTKEGLTRKNRSGFDPLHIAAVKGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALL 785
            E+  + +N  + L GETAL  AA +G ++V   LL+      + + NR G  PL     +GH  IV +LL H   ++        TPL+ AA+ GH   V+ LL++ G  + +    G  AL +A  +GH+ VV++L+
Sbjct: 1020 EVERAQINSFDSLWGETALTAAAGRGKLDVCRLLLEQGA--AVAQPNRRGAVPLFSTVRQGHWQIVDLLLTHGADVNMAD-KQGRTPLMMAASEGHLGTVDFLLAQ-GASIALMDKEGLTALSWACLKGHLSVVRSLV 1153          
BLAST of CX043676 vs. ExPASy Swiss-Prot
Match: KDIS_DANRE (Kinase D-interacting substrate of 220 kDa OS=Danio rerio GN=kidins220 PE=2 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 3.502e-11
Identity = 57/188 (30.32%), Postives = 94/188 (50.00%), Query Frame = 3
Query:  228 KQVTGRHND--TELHLAAQRGDLGAVKQILYGIDSQMVGNLSGAEFDTEVAEIRSSVVNEVNELGETALFTAADKGHIEVLNELLKYSTKEGLTRKNRSGFDPLHIAAVKGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALL 785
            K+V GR ++  T L LA+++G L  V++++            GA  + +  +  S            AL +AA +GH+EV+ ELL+ S    +  ++  G+  L  A+ KG   +  VLL++  + + T    +  P++ AA RGH  +V +LL + G  +  S   G   L +AAR+GH D V  LL
Sbjct:   29 KEVDGRSDNGQTPLMLASEQGSLEIVQELIR----------RGANVNLDDVDCWS------------ALISAAKEGHVEVVKELLENSAY--IEHRDMGGWTALTWASYKGRVEVATVLLENGANPNTTGQQYSVYPIIWAAGRGHAEIV-KLLLEHGAKVNCSDKYGTTPLIWAARKGHYDCVMHLL 191          
BLAST of CX043676 vs. ExPASy Swiss-Prot
Match: FEM1B_CHICK (Protein fem-1 homolog B OS=Gallus gallus GN=FEM1B PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.974e-11
Identity = 61/190 (32.11%), Postives = 90/190 (47.37%), Query Frame = 3
Query:  222 YVKQVTGRHNDTELHLAAQRGDLGAVKQIL--YGIDSQMVGNLSGAEFDTEVAEIRSSVVNEVNELGETALFTAADKGHIEVLNELLKYSTKEGLTRKNRSGFDPLHIAAVKGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALL 785
            YV Q  G+ + T L +AA+ G    V+ +L  Y + +Q  G +    FD  V +            G TAL+ AA  GH EV+  L+ +      T    S   PL  A   G   IV+ L++++ ++S      N T L+ AA +GHT VV  LL +           G  ALHFAA  GH+++V+ L+
Sbjct:   38 YVSQHGGQRS-TPLIIAARNGHTKVVRLLLEHYRVQTQQTGTV---RFDGFVID------------GATALWCAAGAGHFEVVKLLVSHGANVNHTTVTNS--TPLRAACFDGRLDIVKYLVENNANISIANKYDN-TCLMIAAYKGHTDVVRYLLEQHADP-NAKAHCGATALHFAAEAGHLEIVRELV 207          
BLAST of CX043676 vs. ExPASy Swiss-Prot
Match: ANR29_DANRE (Ankyrin repeat domain-containing protein 29 OS=Danio rerio GN=ankrd29 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.974e-11
Identity = 54/184 (29.35%), Postives = 85/184 (46.20%), Query Frame = 3
Query:  270 AAQRGDLGAVKQIL------------YGIDSQMVGNLSGAEFDTEVAEIRSSVVNEVNELGETALFTAADKGHIEVLNELLKYSTKEGLTRKNRSGFDPLHIAAVKGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALL 785
            AA++G+L  ++ +L            YG  + MV + SG         ++ + +N   E G TALF A+ +GH E++  L ++        K+  G   L  A   GH  +V  LL +  ++        AT L  A+  GH  ++ +LLS  G  +   R +G   L  AA+ GH +VVK LL
Sbjct:   16 AARKGNLALLQLLLNSGRVDVDCKDAYGTTALMVASYSGHYECVRELIMQGADINLQRETGSTALFFASQQGHNEIVKLLFEFGASTEFQTKD--GGTALCAACQFGHSRVVDTLLKNGANVHDQLN-DGATALFLASQEGHVNLIRQLLS-SGAKVNQPREDGTAPLWMAAQMGHSEVVKVLL 195          
BLAST of CX043676 vs. ExPASy Swiss-Prot
Match: YE015_HUMAN (Ankyrin repeat and death domain-containing protein ENSP00000345065 OS=Homo sapiens PE=4 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 7.803e-11
Identity = 55/178 (30.90%), Postives = 80/178 (44.94%), Query Frame = 3
Query:  252 DTELHLAAQRGDLGAVKQILYGIDSQMVGNLSGAEFDTEVAEIRSSVVNEVNELGETALFTAADKGHIEVLNELLKYSTKEGLTRKNRSGFDPLHIAAVKGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALL 785
            +T LHLAA+ G   AV+ +L             A++           +NE+NE GET  F + + GH E    LL   +   +   N+     L IA   GH ++V  LL  +  L Q   P   +PL       H  VVN LLS     ++I     +  LH AA +G+V++V+ LL
Sbjct:  142 NTALHLAAKHGHSPAVQVLL-------------AQWQD---------INEMNENGETPFFLSVEGGHEECSKVLLTAGSDTNI--PNKLNISSLQIATRNGHASLVNFLLSENVDLHQKVEPKE-SPLHLVVINNHITVVNSLLSAQHD-IDILNQKQQTPLHVAADRGNVELVETLL 293          
BLAST of CX043676 vs. ExPASy Swiss-Prot
Match: ANR27_PONAB (Ankyrin repeat domain-containing protein 27 OS=Pongo abelii GN=ANKRD27 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.803e-11
Identity = 46/131 (35.11%), Postives = 69/131 (52.67%), Query Frame = 3
Query:  393 VNEVNELGETALFTAADKGHIEVLNELLKYSTKEGLTRKNRSGFDPLHIAAVKGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALL 785
            VN  ++ G + L+ AA  G  +++  LLK+    G   +N     PLH+A  +GH  +V+ LLD +   ++     N TPL+ A + GH  VV  LL + G  +  S + G  ALH A  + HV VV+ LL
Sbjct:  737 VNVTSQDGSSPLYVAALHGRADLIPLLLKHGANAGA--RNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGN-TPLIYACSGGHHEVV-ALLLQHGAAINTSNNKGNTALHEAVIEKHVFVVELLL 863          
The following BLAST results are available for this feature:
BLAST of CX043676 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
FEM1B_DROME1.572e-1132.20Protein fem-1 homolog B OS=Drosophila melanogaster... [more]
INVSA_XENLA2.053e-1132.50Inversin-A OS=Xenopus laevis GN=invs-A PE=1 SV=1[more]
TANC2_MOUSE2.682e-1133.33Protein TANC2 OS=Mus musculus GN=Tanc2 PE=1 SV=1[more]
KDIS_DANRE3.502e-1130.32Kinase D-interacting substrate of 220 kDa OS=Danio... [more]
FEM1B_CHICK5.974e-1132.11Protein fem-1 homolog B OS=Gallus gallus GN=FEM1B ... [more]
ANR29_DANRE5.974e-1129.35Ankyrin repeat domain-containing protein 29 OS=Dan... [more]
YE015_HUMAN7.803e-1130.90Ankyrin repeat and death domain-containing protein... [more]
ANR27_PONAB7.803e-1135.11Ankyrin repeat domain-containing protein 27 OS=Pon... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_12G02_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-12G02-M4-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043676 ID=CX043676; Name=CX043676; organism=Citrus sinensis; type=EST; length=785bp
TATCTAAATTTTTCTCTTTCTAATCAACCATGGCCTCATCTATTGTAGAA
GGAGCTGAGAGAGACCTTGAAAAGGGAATAATATCTCCACAATTAAGCCA
AAAATCAATTGGTGAGTCATCACTAACACCGTCACCTTCCCCTTCACCGT
CTTCAGCAACAGCACCGGCTTTGGTGTTGTCCAACTCAGGCAAACGCATA
GACCAAGCTGGGAAAAAGAAGTATGTTAAACAAGTGACGGGTCGTCATAA
TGATACGGAGCTGCATTTGGCAGCTCAGCGAGGAGATTTGGGGGCAGTGA
AACAGATTCTTTATGGCATAGATTCACAAATGGTGGGGAACTTAAGTGGG
GCTGAATTTGATACTGAAGTTGCAGAGATAAGGTCATCGGTTGTGAATGA
GGTGAATGAGTTGGGAGAGACTGCCTTATTTACAGCTGCAGATAAAGGGC
ATATTGAGGTTCTTAATGAGCTGTTGAAGTATTCGACCAAAGAAGGTCTT
ACAAGGAAGAATCGGTCCGGGTTTGATCCATTGCATATTGCTGCAGTCAA
AGGGCATCATGCCATTGTCCAAGTGTTACTTGATCATGATCCCAGCTTAA
GCCAAACAACCGGCCCTTCAAATGCAACTCCTCTTGTATCTGCTGCTACT
AGGGGGCATACGGCTGTTGTCAATGAACTATTATCAAAGGATGGTGGCTT
GTTAGAAATTTCTAGATCCAATGGGAAAAATGCATTGCATTTTGCTGCCC
GACAAGGCCATGTAGATGTTGTTAAAGCATTACTC
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