CX043672

Overview
NameCX043672
Unique NameCX043672
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length807
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043672 vs. ExPASy Swiss-Prot
Match: CHI8_POPTR (Endochitinase WIN8 OS=Populus trichocarpa GN=WIN8 PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 2.025e-54
Identity = 79/171 (46.20%), Postives = 102/171 (59.65%), Query Frame = 1
Query:  304 KEKLLPFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLP--GQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPP-KPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTF 807
            K +L  FFAQT  ET+G         + WGYC + +++P +SD          P    YYGRGP+QL WN NY  CG  LG +LL+ P+ +ATDPVLSF++A+WFWM       PSCHEVI  EW PS  D+ AGR PG+G+ TNII  G EC   G    +NRI ++  +
Sbjct:  115 KRELAAFFAQTSQETSGRSIIGEDAPFTWGYCLVNELNP-NSDYCDPKTKSSYPCVADYYGRGPLQLRWNYNYGECGNYLGQNLLDEPEKVATDPVLSFEAALWFWMNPHSTGAPSCHEVITGEWSPSEADIEAGRKPGFGMLTNIITNGGECTKDGKTRQQNRIDYYLRY 284          

HSP 2 Score: 72.7886 bits (177), Expect = 2.025e-54
Identity = 30/55 (54.55%), Postives = 41/55 (74.55%), Query Frame = 3
Query:  162 SREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFF 326
            +  MFE +LP RN+  CP +GFYTYDA+  A + +PGFG +G++  RKRE+AAFF
Sbjct:   68 TESMFEQMLPNRNNDSCPGKGFYTYDAYFVATEFYPGFGMTGDDDTRKRELAAFF 122          
BLAST of CX043672 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSJ (Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht7 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.407e-52
Identity = 77/171 (45.03%), Postives = 109/171 (63.74%), Query Frame = 1
Query:  304 KEKLLPFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXL-PGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQ-PPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTF 807
            K ++  F AQT H T+GG        Y+WGYCY ++V  A+SD           PG+ Y+ RGP+Q+ +N NY   GEA+G DLL NP+L+ATDP ++FK+A+W WMTA+ P +PS H V+  +W P+  D  AGR PGYGLTTNI+ GG++C   G +   +R+ F+  +
Sbjct:  149 KREVAAFLAQTSHATSGG-------PYSWGYCY-KEVKGATSDFCVPNARWPCAPGKAYHARGPMQIAYNYNYGAAGEAIGADLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTPTPADSAAGRAPGYGLTTNILTGGLQC--AGGNGGADRVAFYKRY 309          

HSP 2 Score: 74.3294 bits (181), Expect = 1.407e-52
Identity = 34/64 (53.12%), Postives = 45/64 (70.31%), Query Frame = 3
Query:  138 GGELG--KIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAF 323
            GG  G   +++ + FE +LP+R+DA CPARGFY Y AF+ AA AFP F  +G+   RKRE+AAF
Sbjct:   92 GGRAGVASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAF 155          
BLAST of CX043672 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSI (Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.407e-52
Identity = 77/171 (45.03%), Postives = 109/171 (63.74%), Query Frame = 1
Query:  304 KEKLLPFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXL-PGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQ-PPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTF 807
            K ++  F AQT H T+GG        Y+WGYCY ++V  A+SD           PG+ Y+ RGP+Q+ +N NY   GEA+G DLL NP+L+ATDP ++FK+A+W WMTA+ P +PS H V+  +W P+  D  AGR PGYGLTTNI+ GG++C   G +   +R+ F+  +
Sbjct:  149 KREVAAFLAQTSHATSGG-------PYSWGYCY-KEVKGATSDFCVPNARWPCAPGKAYHARGPMQIAYNYNYGAAGEAIGADLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTPTPADSAAGRAPGYGLTTNILTGGLQC--AGGNGGADRVAFYKRY 309          

HSP 2 Score: 74.3294 bits (181), Expect = 1.407e-52
Identity = 34/64 (53.12%), Postives = 45/64 (70.31%), Query Frame = 3
Query:  138 GGELG--KIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAF 323
            GG  G   +++ + FE +LP+R+DA CPARGFY Y AF+ AA AFP F  +G+   RKRE+AAF
Sbjct:   92 GGRAGVASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAF 155          
BLAST of CX043672 vs. ExPASy Swiss-Prot
Match: CHID_SOLLC (Basic endochitinase (Fragment) OS=Solanum lycopersicum GN=CHI14 PE=2 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.534e-49
Identity = 93/184 (50.54%), Postives = 117/184 (63.59%), Query Frame = 1
Query:  259 KLFQALVTLEMKPCVKEKLLPFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTF 807
            K F A  T        +++  F AQT HETTGGW  AP G Y+WGYCY R+                 PG+ Y+GRGPIQ+++N NY   G A+GV+LLNNPDL+A D V+SFK+A+WFWMTAQ PKPS H+VI   W PS  D   GR+PG+G+ TNIINGG+EC    N  + NRIGF+  +
Sbjct:   42 KTFAAFGTTGDTNTRNKEIAAFLAQTSHETTGGWATAPDGPYSWGYCYNREQGSPGDYCASSQQWPCAPGKKYFGRGPIQISYNYNYGAAGSAIGVNLLNNPDLVANDAVVSFKTALWFWMTAQQPKPSAHDVITGRWSPSVADSAPGRVPGFGVITNIINGGMECNSGSNALMDNRIGFYRRY 225          
BLAST of CX043672 vs. ExPASy Swiss-Prot
Match: CHIT_AVESA (Endochitinase (Fragments) OS=Avena sativa PE=1 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 9.015e-42
Identity = 85/180 (47.22%), Postives = 109/180 (60.56%), Query Frame = 1
Query:  259 KLFQALVTLEMKPCVKEKLLPFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFF 798
            K F A  T       K ++  F AQT HETTGGW  AP G Y  G         ++SD             Y+GRGPIQ+++N NY   G+A+GVDLL NPDL+ +D  + FK+A+WFWMT Q PKPS H+VI   W PS+ D  AGR+PGYG+ TNII+GG+ECG      V +RIG++
Sbjct:   30 KSFPAFATTGSTDVRKREVAAFLAQTSHETTGGWPTAPDGPYELG---------STSD-------------YFGRGPIQISYNYNYGAAGKAIGVDLLRNPDLVTSDNTVEFKTALWFWMTPQSPKPSSHDVITGRWSPSSTDKAAGRVPGYGVLTNIIDGGVECGKGQESHVADRIGYY 187          
BLAST of CX043672 vs. ExPASy Swiss-Prot
Match: CHI6_ORYSJ (Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht6 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.045e-29
Identity = 51/171 (29.82%), Postives = 77/171 (45.03%), Query Frame = 1
Query:  304 KEKLLPFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASS---DXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTF 807
            K ++  FFA   HET               +CYI ++   S    D             YYGRGP+Q++WN NY   G+++G D L +PD +A  PVL+F++A+W+W        + H+  +                G+G T   ING +EC      AV NR+ ++  F
Sbjct:  119 KREIAAFFAHANHETIK-------------FCYIEEIDGPSKNYCDETSTQWPCMAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSPVLAFQTALWYWTN------NVHDAFVSG-------------QGFGATIRAINGALECDGKNPTAVSNRVAYYQQF 257          

HSP 2 Score: 61.6178 bits (148), Expect = 1.045e-29
Identity = 34/80 (42.50%), Postives = 46/80 (57.50%), Query Frame = 3
Query:   87 CGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFF 326
            CG+G   G  D    T+   +  I++ E F  L+   +D  C A+GFYT DAF+ AA  +P FG +G+    KREIAAFF
Sbjct:   49 CGTGCQAGPCDVP-ATNDVSVASIVTPEFFAALVAQADDG-CAAKGFYTRDAFLTAAGGYPSFGRTGSVDDSKREIAAFF 126          
BLAST of CX043672 vs. ExPASy Swiss-Prot
Match: CHIP_BETVU (Acidic endochitinase SP2 OS=Beta vulgaris GN=SP2 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.461e-28
Identity = 59/173 (34.10%), Postives = 80/173 (46.24%), Query Frame = 1
Query:  304 KEKLLPFFAQTGHETTGGWTDAPGGEYAWGYCYIRQ----VSPASSDXXXXXXXXXLPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTF 807
            K ++  FFA   HETT               C+I +    V  A  D           G+ YYGRGP+QL+WN NY   G+A+G D L NP+ +ATD   SFK+A+WFWMT                     +V++    G+G TT  ING +EC     D   +RI F+  +
Sbjct:  136 KREIAAFFAHISHETTN-------------LCHIEERDGDVGDAYCDQDKAAQYPCAAGKKYYGRGPLQLSWNYNYALAGQAIGFDGLGNPEKVATDVNTSFKAAMWFWMT---------------------NVHSVMNQGFGATTKAINGALECNGQNQDQANDRIQFYKKY 274          

HSP 2 Score: 51.6026 bits (122), Expect = 1.461e-28
Identity = 34/92 (36.96%), Postives = 44/92 (47.83%), Query Frame = 3
Query:   84 NCGSGVVCGERDT-----------GHGTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFF 326
            NC SG   G   T           G G  G  +  I+S+  F+ ++  +  A CP + FYT  AF+ A    P FGN G+    KREIAAFF
Sbjct:   55 NCQSGPCEGGTPTTPTTPTTPTTPGTGGGGSSVSDIVSQAFFDGIIG-QAAASCPGKNFYTRAAFLSAVD--PKFGNEGSSDDNKREIAAFF 143          
BLAST of CX043672 vs. ExPASy Swiss-Prot
Match: CHIT_DIOJA (Acidic endochitinase OS=Dioscorea japonica PE=1 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 7.134e-28
Identity = 53/168 (31.55%), Postives = 83/168 (49.40%), Query Frame = 1
Query:  304 KEKLLPFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTF 807
            K ++  +FA   HET           +A  YC   Q  P + +            +Y+GRGP+QL+WN NY+  G+ L  D LN+PD++  DP++SFK+++WFW+     +     VI+D   P+          G+G T  IINGG EC       +  R+G++  +
Sbjct:   97 KREIAAYFAHVTHETGHLCYIEERDGHANNYCQESQQYPCNPNK-----------EYFGRGPMQLSWNYNYIDAGKELHFDGLNDPDIVGRDPIISFKTSLWFWI-----RKGVQYVILD---PN---------QGFGATIRIINGGQECDGHNTAQMMARVGYYQEY 236          

HSP 2 Score: 54.6842 bits (130), Expect = 7.134e-28
Identity = 32/81 (39.51%), Postives = 43/81 (53.09%), Query Frame = 3
Query:   87 CGSGVVCGER-DTGHGTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFF 326
            CG G   G   D   G     +  I+++E F D +  +  A CP + FYT   F+EA  A+PGFG    +  RKREIAA+F
Sbjct:   25 CGPGCQAGPCWDPCEGDGTLTVSDIVTQE-FWDGIASQAAANCPGKSFYTRSNFLEAVSAYPGFGTKCTDEDRKREIAAYF 104          
BLAST of CX043672 vs. ExPASy Swiss-Prot
Match: CHI5_ORYSJ (Chitinase 5 OS=Oryza sativa subsp. japonica GN=Cht5 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 4.835e-26
Identity = 57/171 (33.33%), Postives = 81/171 (47.37%), Query Frame = 1
Query:  304 KEKLLPFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXX--LPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTF 807
            K ++  FFA   HET                CYI +++ AS D            PG+ YYGRGP+Q++WN NY   G+ +G D L +PD +A DP +SFK+A+WFWM                     N+V+   L G+G T   ING +EC      AV  R+ ++  +
Sbjct:  138 KREIAAFFAHVTHETGH-------------MCYINEINGASMDYCDKNNKQWPCQPGKKYYGRGPLQISWNYNYGPAGQNIGFDGLRDPDRVAQDPTISFKTALWFWM---------------------NNVHQVMLQGFGATIRAINGALECNGKNPGAVNARVNYYKDY 274          

HSP 2 Score: 42.3578 bits (98), Expect = 4.835e-26
Identity = 26/81 (32.10%), Postives = 37/81 (45.68%), Query Frame = 3
Query:   90 GSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDAR--CPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFF 326
            G G   G    G G  G  +  +++   F  +   +N A   C  + FYT  +F+ AA ++ GF         KREIAAFF
Sbjct:   68 GGGGGGGGGGGGGGGSGVSVESVVTEAFFNGI---KNQAPNGCAGKNFYTRQSFLNAAHSYSGFARDRTNDDSKREIAAFF 145          
BLAST of CX043672 vs. ExPASy Swiss-Prot
Match: CHIB_MAIZE (Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.390e-25
Identity = 50/170 (29.41%), Postives = 79/170 (46.47%), Query Frame = 1
Query:  304 KEKLLPFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASS--DXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTF 807
            K ++  FFA   HET               +CYI +++ +++  D            +YYGRGP+Q++WN NY   G A+G D L +P  +A D V++FK+A+WFWM       S H V+                 G+G TT  +   +ECG      +  R+G++  +
Sbjct:  120 KREIAAFFAHATHETGH-------------FCYISEINKSNAYCDPTKRQWPCAAGQKYYGRGPLQISWNYNYGPAGRAIGFDGLGDPGRVARDAVVAFKAALWFWMN------SVHGVVPQ---------------GFGATTRAMQRALECGGNNPAQMNARVGYYRQY 255          

HSP 2 Score: 53.1434 bits (126), Expect = 1.390e-25
Identity = 29/87 (33.33%), Postives = 43/87 (49.43%), Query Frame = 3
Query:   87 CGSGVVCGERDTGHGTDGG-----ELGKIISREMFEDLLPYRNDAR--CPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFF 326
            CG G   G   +G G  G       +  +++   F  +   +N A   C  + FYT  AF+ A + +PGF + G++   KREIAAFF
Sbjct:   44 CGDGCQSGPCRSGRGGGGSGGGGANVASVVTSSFFNGI---KNQAGSGCEGKNFYTRSAFLSAVKGYPGFAHGGSQVQGKREIAAFF 127          
The following BLAST results are available for this feature:
BLAST of CX043672 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
CHI8_POPTR2.025e-5446.20Endochitinase WIN8 OS=Populus trichocarpa GN=WIN8 ... [more]
CHI7_ORYSJ1.407e-5245.03Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHI7_ORYSI1.407e-5245.03Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 ... [more]
CHID_SOLLC1.534e-4950.54Basic endochitinase (Fragment) OS=Solanum lycopers... [more]
CHIT_AVESA9.015e-4247.22Endochitinase (Fragments) OS=Avena sativa PE=1 SV=... [more]
CHI6_ORYSJ1.045e-2929.82Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHIP_BETVU1.461e-2834.10Acidic endochitinase SP2 OS=Beta vulgaris GN=SP2 P... [more]
CHIT_DIOJA7.134e-2831.55Acidic endochitinase OS=Dioscorea japonica PE=1 SV... [more]
CHI5_ORYSJ4.835e-2633.33Chitinase 5 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHIB_MAIZE1.390e-2529.41Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_12F12_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-12F12-K24-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043672 ID=CX043672; Name=CX043672; organism=Citrus sinensis; type=EST; length=807bp
CTCTTGCTTTCAAAATGAGGCTCATTGGGTCCTTACTAATTTTCTCTCTA
GTTTTATCTTTTGTACTAGGAGGTTCAGCACAGAATTGTGGAAGCGGCGT
TGTGTGCGGTGAACGTGATACTGGCCACGGGACGGATGGCGGTGAACTGG
GCAAGATCATCTCAAGGGAGATGTTTGAAGACTTGCTTCCGTATAGAAAT
GATGCCCGATGCCCTGCCAGAGGCTTCTACACTTATGATGCTTTTATAGA
GGCAGCCCAAGCTTTTCCAGGCTTTGGTAACTCTGGAAATGAAACCATGC
GTAAAAGAGAAATTGCTGCCTTTTTTTGCCCAAACTGGCCATGAAACTAC
TGGGGGATGGACCGATGCACCTGGTGGAGAATATGCTTGGGGATATTGCT
ATATTAGGCAAGTTAGCCCTGCGTCGTCCGACTACTGTTATCCTTACTGT
CCATGTCCCTTGCCAGGGCAATACTATGGCCGAGGTCCAATTCAACTCAC
TTGGAATTGCAATTACTTAAGGTGCGGAGAAGCCTTGGGGGTGGACTTGT
TGAACAATCCAGACCTACTTGCCACTGATCCAGTACTATCATTCAAGTCA
GCAATCTGGTTCTGGATGACTGCACAGCCACCAAAGCCATCGTGCCACGA
AGTCATTATCGACGAATGGAAACCATCAGCAAATGACGTAAACGCCGGCC
GGCTTCCGGGATACGGTCTAACCACAAATATAATCAACGGTGGAATTGAA
TGTGGCTACGTTGGGAATGACGCTGTACGTAACCGTATTGGGTTCTTTAC
CACTTTC
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