CX043672
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043672 vs. ExPASy Swiss-Prot
Match: CHIA_MAIZE (Endochitinase A OS=Zea mays PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.808e-25 Identity = 48/170 (28.24%), Postives = 79/170 (46.47%), Query Frame = 1 Query: 304 KEKLLPFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASS--DXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTF 807 K ++ FFA HET +CYI +++ +++ D +YYGRGP+Q++WN NY G +G + L +P+ +A D V++FK+A+WFWM N+V+ G+G T ING +EC + R+G++ + Sbjct: 131 KREIAAFFAHVTHETGH-------------FCYISEINKSNAYCDASNRQWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWM---------------------NNVHGVMPQGFGATIRAINGALECNGNNPAQMNARVGYYKQY 266 HSP 2 Score: 53.9138 bits (128), Expect = 1.808e-25 Identity = 30/81 (37.04%), Postives = 41/81 (50.62%), Query Frame = 3 Query: 90 GSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDAR--CPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFF 326 G G G G G+ G + +++ F + +N A C + FYT AF+ A A+PGF + G E KREIAAFF Sbjct: 61 GGGGGGGGGGGGGGSGGANVANVVTDAFFNGI---KNQAGSGCEGKNFYTRSAFLSAVNAYPGFAHGGTEVEGKREIAAFF 138
BLAST of CX043672 vs. ExPASy Swiss-Prot
Match: CHI4_BRANA (Basic endochitinase CHB4 OS=Brassica napus PE=1 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 3.065e-25 Identity = 46/141 (32.62%), Postives = 78/141 (55.32%), Query Frame = 1 Query: 394 YCYIRQVSPASSDXXXXXXXXX--LPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTF 807 +CYI +++ AS D PG+ Y+GRGPIQL+WN NY CG++L ++LL P+L++++P ++F++ +WFWM + P ++++ G+G T IN G+EC + AV RI ++ + Sbjct: 136 FCYIEEINGASRDYCDENNRQYPCAPGKGYFGRGPIQLSWNYNYGACGQSLNLNLLGQPELVSSNPTVAFRTGLWFWMNSVRP-------VLNQ--------------GFGATIRAIN-GMECNGGNSGAVNARIRYYRDY 254 HSP 2 Score: 50.447 bits (119), Expect = 3.065e-25 Identity = 30/84 (35.71%), Postives = 42/84 (50.00%), Query Frame = 3 Query: 87 CGSGVVCGERDTGHGTD----GGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFF 326 CG+G G + GT GG +G I+++ F ++ C + FYT D+FI AA FP F NS + +REIA F Sbjct: 48 CGTGCRSGPCRSPGGTPSPPGGGSVGSIVTQAFFNGIINQAGGG-CAGKNFYTRDSFINAANTFPNFANS----VTRREIATMF 126
BLAST of CX043672 vs. ExPASy Swiss-Prot
Match: CHI4_ORYSJ (Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht4 PE=2 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 3.984e-25 Identity = 55/171 (32.16%), Postives = 80/171 (46.78%), Query Frame = 1 Query: 304 KEKLLPFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXX--LPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTF 807 K ++ FFA HET CYI +++ A+ D PG+ YYGRGP+Q++WN NY G+ +G D L +PD +A DP +SFK+A+WFWM N+V+ G+G T ING +EC AV R+ ++ + Sbjct: 135 KREIAAFFAHVTHETGH-------------MCYINEINGANMDYCDKSNKQWPCQPGKKYYGRGPLQISWNFNYGPAGKNIGFDGLRDPDKVAQDPTISFKTALWFWM---------------------NNVHQVMSQGFGATIRAINGALECNGKNPGAVNARVNYYKDY 271 HSP 2 Score: 43.1282 bits (100), Expect = 3.984e-25 Identity = 25/85 (29.41%), Postives = 36/85 (42.35%), Query Frame = 3 Query: 72 GSAQNCGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFF 326 G G G G G + + E F + + + C + FYT +F+ AA+++ GF N KREIAAFF Sbjct: 58 GPCWGSGGEAAAGMAGRKAGAGAGVSVESVVTEAFFNGIKNQAPNGCAGKSFYTRQSFLNAARSYSGFANDRTNDDSKREIAAFF 142
BLAST of CX043672 vs. ExPASy Swiss-Prot
Match: AGI_URTDI (Lectin/endochitinase 1 OS=Urtica dioica GN=UDA1 PE=1 SV=3) HSP 1 Score: 110.923 bits (276), Expect = 8.477e-24 Identity = 68/185 (36.76%), Postives = 99/185 (53.51%), Query Frame = 1 Query: 265 FQALVTLEMKPCVKEKLLPFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPGQYYG-RGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGND--AVR-NRIGFFTTF 807 F A T+ K ++ F A T+G +D +AWG C+I + +D G+ Y RGPIQLT N NY G+A+G DL+ NPDL+ DP++SFK+A+WFWM+ KPSCH++++ +AN A R+P G+ NII+ G+D AVR + IGF+ + Sbjct: 167 FPAFGTIGDVATRKREVAAFLAHISQATSGERSDVEN-PHAWGLCHINTTTVTENDFCTSSDWPCAAGKKYSPRGPIQLTHNFNYGLAGQAIGEDLIQNPDLVEKDPIISFKTALWFWMSQHDNKPSCHDIVL-----NANSA-ANRIPNKGVIGNIISRAF-----GHDDFAVRSSSIGFYKRY 339
BLAST of CX043672 vs. ExPASy Swiss-Prot
Match: CHI4_PHAVU (Endochitinase PR4 OS=Phaseolus vulgaris GN=CHI4 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 5.947e-23 Identity = 46/142 (32.39%), Postives = 68/142 (47.89%), Query Frame = 1 Query: 394 YCYIRQVSPASSDXXXXXXXXXLPGQ----YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTF 807 +CYI ++ AS D P Y+GRGPIQL+WN NY G A D L P+ ++ D V+SFK+A+W+WM Q +P ++ G+G T ING +EC V+ R+ ++T + Sbjct: 136 FCYIEEIDGASKDYCDEESIAQYPCSSSKGYHGRGPIQLSWNFNYGPAGSANNFDGLGAPETVSNDVVVSFKTALWYWM--QHVRPVINQ-------------------GFGATIRAINGALECDGANPTTVQARVNYYTEY 256 HSP 2 Score: 46.2098 bits (108), Expect = 5.947e-23 Identity = 27/80 (33.75%), Postives = 38/80 (47.50%), Query Frame = 3 Query: 87 CGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFF 326 CG+G G T + I F + + + D+ C + FYT DAF+ A ++ FG G+E KREIAA F Sbjct: 47 CGTGCQQGPCTTASPPPSNNVNADILTADFLNGIIDQADSGCAGKNFYTRDAFLSALNSYTDFGRVGSEDDSKREIAAAF 126
BLAST of CX043672 vs. ExPASy Swiss-Prot
Match: CHI4_ARAHY (Endochitinase 4 (Fragment) OS=Arachis hypogaea PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.166e-11 Identity = 29/46 (63.04%), Postives = 36/46 (78.26%), Query Frame = 1 Query: 616 MTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIEC 753 MT Q KPSCH+VI + W+P+A D AGR PGYG+ TNIINGG++C Sbjct: 1 MTPQGNKPSCHDVITNAWRPTATDSAAGRAPGYGVITNIINGGLDC 46 The following BLAST results are available for this feature:
BLAST of CX043672 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043672 ID=CX043672; Name=CX043672; organism=Citrus sinensis; type=EST; length=807bpback to top |