CX043671

Overview
NameCX043671
Unique NameCX043671
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length849
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9802 contig Csv1_Contig9802:290..1137. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX043671 vs. ExPASy Swiss-Prot
Match: CHIA_SOLCI (Acidic endochitinase pcht28 OS=Solanum chilense PE=2 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 1.122e-61
Identity = 97/190 (51.05%), Postives = 126/190 (66.32%), Query Frame = -1
Query:  214 KEKLLPFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXPLPGQYYGRGPIQLTWNCNYLRCGEALGV--DLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 777
            K+++  FF QT HET GG      G +  GYC++RQ+  +               +YYGRGPIQLT   NY R G+ +GV  DL+NNPDL+ATDP++SF++AIWFWMTAQ  KPSCH VII +W PS  D  A R+PGYG+ TNIINGG+EC    N AV +RIGF+  +CG   +  G+NLDC+NQ+ +
Sbjct:   79 KKEIAAFFGQTSHETKGG----SAGTFTGGYCFVRQIDQSD--------------RYYGRGPIQLTHQSNYERAGQGIGVGQDLVNNPDLVATDPIISFRTAIWFWMTAQDNKPSCHNVIIGQWTPSPADTAANRVPGYGVITNIINGGLECNMGPNTAVESRIGFYRRYCGMLNVPTGENLDCNNQKNF 250          

HSP 2 Score: 51.2174 bits (121), Expect = 1.122e-61
Identity = 22/31 (70.97%), Postives = 27/31 (87.10%), Query Frame = -3
Query:  755 YDAFIEAAQAFPGFGNSGNETMRKREIAAFF 847
            YDAFI AA +FPGFG +G++T RK+EIAAFF
Sbjct:   56 YDAFIAAANSFPGFGTTGDDTARKKEIAAFF 86          
BLAST of CX043671 vs. ExPASy Swiss-Prot
Match: CHIB_SOLLC (Acidic 27 kDa endochitinase OS=Solanum lycopersicum GN=CHI17 PE=1 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 3.244e-61
Identity = 100/188 (53.19%), Postives = 125/188 (66.49%), Query Frame = -1
Query:  214 KEKLLPFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 777
            K+++  FF QT HETTGG   A G  +A GYC++R+ +   S              +YGRGPIQLT   NY   G+A+G DL+NNPDL+ATD  +SFK+AIWFWMTAQ  KPSCH+VI  +W PSA D +A R PGYG+ TNIINGGIECG   N  V +RIGF+  +C    + PGDNLDC +QR +
Sbjct:   71 KKEIAAFFGQTSHETTGGSLSADG-PFAGGYCFVREGNQMGSG-------------FYGRGPIQLTGQSNYDLAGQAIGQDLVNNPDLVATDATVSFKTAIWFWMTAQGNKPSCHDVITGQWTPSAADASANRQPGYGVITNIINGGIECGKGQNPQVEDRIGFYRRYCTILNVAPGDNLDCYDQRNF 244          

HSP 2 Score: 51.2174 bits (121), Expect = 3.244e-61
Identity = 22/31 (70.97%), Postives = 27/31 (87.10%), Query Frame = -3
Query:  755 YDAFIEAAQAFPGFGNSGNETMRKREIAAFF 847
            YDAFI AA +FPGFG +G++T RK+EIAAFF
Sbjct:   48 YDAFIAAANSFPGFGTTGDDTARKKEIAAFF 78          
BLAST of CX043671 vs. ExPASy Swiss-Prot
Match: CHIQ_TOBAC (Acidic endochitinase Q OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 7.188e-61
Identity = 99/189 (52.38%), Postives = 125/189 (66.14%), Query Frame = -1
Query:  211 KEKLLPFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYG 777
            ++++  FF QT HETTGG   A    +  GYC++RQ   +               +YYGRGPIQLT   NY + G A+G +L+NNPDL+ATD  +SFK+AIWFWMT Q  KPS H+VII  W PSA D  A R+PGYG+ TNIINGGIECG   NDAV +RIG++  +CG   + PG+NLDC NQR +G
Sbjct:   79 RKEIAAFFGQTSHETTGGSLSAE--PFTGGYCFVRQNDQSD--------------RYYGRGPIQLTNRNNYEKAGTAIGQELVNNPDLVATDATISFKTAIWFWMTPQDNKPSSHDVIIGRWTPSAADQAANRVPGYGVITNIINGGIECGIGRNDAVEDRIGYYRRYCGMLNVAPGENLDCYNQRNFG 251          

HSP 2 Score: 50.0618 bits (118), Expect = 7.188e-61
Identity = 21/31 (67.74%), Postives = 27/31 (87.10%), Query Frame = -3
Query:  755 YDAFIEAAQAFPGFGNSGNETMRKREIAAFF 847
            YDAFI AA +FPGFG +G++T R++EIAAFF
Sbjct:   56 YDAFIAAANSFPGFGTTGDDTARRKEIAAFF 86          
BLAST of CX043671 vs. ExPASy Swiss-Prot
Match: CHI12_ORYSJ (Chitinase 12 OS=Oryza sativa subsp. japonica GN=Cht12 PE=2 SV=2)

HSP 1 Score: 215.698 bits (548), Expect = 2.072e-60
Identity = 99/192 (51.56%), Postives = 127/192 (66.15%), Query Frame = -1
Query:  211 KEKLLPFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXP---LPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYG 777
            K ++  F AQT HETTGGW  AP G YAWGYC+  +   A+                 +YYGRGPIQL++N NY   G+A+G DLL +PDL+A+D  +SF +A WFWMT Q PKPSCH V   +W PSA+D  AGR+PGYG+ TNIINGG+ECG+  +D V +RIGF+  +C   G+    NLDC +QRP+G
Sbjct:  134 KREVAAFLAQTSHETTGGWATAPDGPYAWGYCFKEENGGAAGPDYCQQSAQWPCAAGKKYYGRGPIQLSYNFNYGPAGQAIGADLLGDPDLVASDATVSFDTAFWFWMTPQSPKPSCHAVATGQWTPSADDQAAGRVPGYGVITNIINGGLECGHGEDDRVADRIGFYKRYCDILGVSYDANLDCYSQRPFG 325          

HSP 2 Score: 38.5058 bits (88), Expect = 2.072e-60
Identity = 18/31 (58.06%), Postives = 22/31 (70.97%), Query Frame = -3
Query:  758 YDAFIEAAQAFPGFGNSGNET-MRKREIAAF 847
            YDAF+ AA AFPGF  +G +    KRE+AAF
Sbjct:  110 YDAFVAAASAFPGFAAAGGDADTNKREVAAF 140          
BLAST of CX043671 vs. ExPASy Swiss-Prot
Match: CHIA_SOLLC (Acidic 26 kDa endochitinase OS=Solanum lycopersicum GN=CHI3 PE=1 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 4.605e-60
Identity = 94/190 (49.47%), Postives = 123/190 (64.74%), Query Frame = -1
Query:  214 KEKLLPFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXPLPGQYYGRGPIQLTWNCNYLRCGEALGV--DLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 777
            K+++  FF QT HET GG      G +  GYC+++Q+  +               +YYGRGPIQLT   NY R G+ +GV  +L+NNPDL+ATDP++SFK+AIWFWMT Q  KPSCH VII +W PS  D  A R+PGYG+ TNIING  ECG   N A  +RIGF+  +CG   +  G+NLDC+NQ+ +
Sbjct:   79 KKEIAAFFGQTSHETNGG----SAGTFTGGYCFVKQIEQSD--------------RYYGRGPIQLTHQSNYERAGQGIGVGQELVNNPDLVATDPIISFKTAIWFWMTEQDNKPSCHNVIIGQWTPSPKDTAANRVPGYGVITNIINGQFECGMGPNTAAESRIGFYRRYCGMLNVPTGENLDCNNQKNF 250          

HSP 2 Score: 51.2174 bits (121), Expect = 4.605e-60
Identity = 22/31 (70.97%), Postives = 27/31 (87.10%), Query Frame = -3
Query:  755 YDAFIEAAQAFPGFGNSGNETMRKREIAAFF 847
            YDAFI AA +FPGFG +G++T RK+EIAAFF
Sbjct:   56 YDAFIAAANSFPGFGTAGDDTARKKEIAAFF 86          
BLAST of CX043671 vs. ExPASy Swiss-Prot
Match: CHIT_PETHY (Acidic endochitinase OS=Petunia hybrida PE=2 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 1.021e-59
Identity = 99/188 (52.66%), Postives = 123/188 (65.43%), Query Frame = -1
Query:  214 KEKLLPFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 777
            K+++  FF QT HETTGG T +P G YA GYC++R+ +   +              YYGRGPIQLT   NY   G+A+  DL+NNPDL+ATD  +SFK+AIWFWMT Q  KPSCH+VI   W PSA D +A R+PGYG+ TNIINGGIECG   N  V +RIG++        + PGDNLDC NQR +
Sbjct:   78 KKEIAAFFGQTSHETTGG-TLSPDGPYAGGYCFLREGNQMGNG-------------YYGRGPIQLTGQSNYDLAGKAIEQDLVNNPDLVATDATVSFKTAIWFWMTPQGNKPSCHDVITGRWTPSAADTSANRVPGYGVITNIINGGIECGKGQNARVEDRIGYYRRNVSIMNVAPGDNLDCYNQRNF 251          

HSP 2 Score: 51.2174 bits (121), Expect = 1.021e-59
Identity = 22/31 (70.97%), Postives = 27/31 (87.10%), Query Frame = -3
Query:  755 YDAFIEAAQAFPGFGNSGNETMRKREIAAFF 847
            YDAFI AA +FPGFG +G++T RK+EIAAFF
Sbjct:   55 YDAFIAAANSFPGFGTTGDDTARKKEIAAFF 85          
BLAST of CX043671 vs. ExPASy Swiss-Prot
Match: CHI8_ORYSJ (Chitinase 8 OS=Oryza sativa subsp. japonica GN=Cht8 PE=2 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 2.261e-59
Identity = 101/189 (53.44%), Postives = 126/189 (66.67%), Query Frame = -1
Query:  214 VKEKLLPFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 780
            ++ +L  FF QT HETTGG T     ++ WGYC+  +++ A+S              YYGRGPIQLT   NY   G ALG+DL+ NPDL++TD V+SFK+AIWFWMTAQ  KPSCH+VI+  W PSA D  AGR+PGYG+ TNIINGGIECG   NDA  +RIG++  +C   G   G NLDC NQR +
Sbjct:   84 IRRELAAFFGQTSHETTGG-TRGSSDQFQWGYCFKEEINKATSPP------------YYGRGPIQLTGQSNYQAAGNALGLDLVGNPDLVSTDAVVSFKTAIWFWMTAQGNKPSCHDVILGRWTPSAADTAAGRVPGYGVITNIINGGIECGVGQNDANVDRIGYYKRYCDMLGAGYGSNLDCYNQRNF 259          

HSP 2 Score: 39.6614 bits (91), Expect = 2.261e-59
Identity = 19/32 (59.38%), Postives = 23/32 (71.88%), Query Frame = -3
Query:  755 YDAFIEAAQAFPGFGNSGNET-MRKREIAAFF 847
            YDAFI AA +FP FG SG    + +RE+AAFF
Sbjct:   61 YDAFIAAANSFPAFGTSGGSAELIRRELAAFF 92          
BLAST of CX043671 vs. ExPASy Swiss-Prot
Match: CHID_SOLLC (Basic endochitinase (Fragment) OS=Solanum lycopersicum GN=CHI14 PE=2 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 2.306e-59
Identity = 106/205 (51.71%), Postives = 134/205 (65.37%), Query Frame = -1
Query:  211 KLFQALVTLEMKPCVKEKLLPFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXPLPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYG 822
            K F A  T        +++  F AQT HETTGGW  AP G Y+WGYCY R+                 PG+ Y+GRGPIQ+++N NY   G A+GV+LLNNPDL+A D V+SFK+A+WFWMTAQ PKPS H+VI   W PS  D   GR+PG+G+ TNIINGG+EC    N  + NRIGF+  +C   G+ PG+NLDC+NQRP+G
Sbjct:   42 KTFAAFGTTGDTNTRNKEIAAFLAQTSHETTGGWATAPDGPYSWGYCYNREQGSPGDYCASSQQWPCAPGKKYFGRGPIQISYNYNYGAAGSAIGVNLLNNPDLVANDAVVSFKTALWFWMTAQQPKPSAHDVITGRWSPSVADSAPGRVPGFGVITNIINGGMECNSGSNALMDNRIGFYRRYCQILGVDPGNNLDCANQRPFG 246          
BLAST of CX043671 vs. ExPASy Swiss-Prot
Match: CHIP_TOBAC (Acidic endochitinase P OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 8.523e-59
Identity = 97/188 (51.60%), Postives = 121/188 (64.36%), Query Frame = -1
Query:  214 KEKLLPFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 777
            ++++  FF QT HETTGG   A    +  GYC++RQ   +               +YYGRGPIQLT   NY + G A+  DL+NNPDL+ATD  +SFK+AIWFWMT Q  KPS H+VII  W PSA D +A R PG G+ TNIINGGIECG   N AV +RIG++  +CG   + PGDNLDC NQR +
Sbjct:   79 RKEIAAFFGQTSHETTGGSLSAE--PFTGGYCFVRQNDQSD--------------RYYGRGPIQLTNQNNYEKAGNAIRQDLVNNPDLVATDATISFKTAIWFWMTPQDNKPSSHDVIIGSWTPSAADQSANRAPGCGVITNIINGGIECGVGPNAAVEDRIGYYRRYCGMLNVAPGDNLDCYNQRNF 250          

HSP 2 Score: 51.2174 bits (121), Expect = 8.523e-59
Identity = 22/31 (70.97%), Postives = 27/31 (87.10%), Query Frame = -3
Query:  755 YDAFIEAAQAFPGFGNSGNETMRKREIAAFF 847
            YDAFI AA +FPGFG SG++T R++EIAAFF
Sbjct:   56 YDAFIAAANSFPGFGTSGDDTARRKEIAAFF 86          
BLAST of CX043671 vs. ExPASy Swiss-Prot
Match: CHI10_ORYSJ (Chitinase 10 OS=Oryza sativa subsp. japonica GN=Cht10 PE=2 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 5.384e-55
Identity = 92/190 (48.42%), Postives = 126/190 (66.32%), Query Frame = -1
Query:  214 KEKLLPFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXPL-PGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 777
            K ++  F AQ  HETTGGW  AP G YAWG CY  +++P SS         P  PG+ Y+GRGPIQ++WN NY   G+ALG D L NP+++A    ++F++A+WFWMT +  KPSCH+V++ E++P   DV A R  G+GL TNI+NGG+EC   G+  V NRIGF+  +C   G+  G NLDC +Q+P+
Sbjct:  101 KREVAAFLAQISHETTGGWATAPDGPYAWGLCYKEEINPQSSYCDATDKQWPCYPGKSYHGRGPIQISWNFNYGPAGQALGFDGLRNPEIVANCSDIAFQTALWFWMTPRDTKPSCHQVMVGEYRPGPADVAANRTAGFGLVTNIVNGGLECNRAGDARVNNRIGFYRRYCQVLGVDVGPNLDCEHQQPF 290          

HSP 2 Score: 33.113 bits (74), Expect = 5.384e-55
Identity = 15/30 (50.00%), Postives = 19/30 (63.33%), Query Frame = -3
Query:  758 YDAFIEAAQAFPGFGNSGNETMRKREIAAF 847
            Y +F+ AA  FP F  +G    RKRE+AAF
Sbjct:   78 YASFVRAATRFPRFAATGCADARKREVAAF 107          
The following BLAST results are available for this feature:
BLAST of CX043671 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
CHIA_SOLCI1.122e-6151.05Acidic endochitinase pcht28 OS=Solanum chilense PE... [more]
CHIB_SOLLC3.244e-6153.19Acidic 27 kDa endochitinase OS=Solanum lycopersicu... [more]
CHIQ_TOBAC7.188e-6152.38Acidic endochitinase Q OS=Nicotiana tabacum PE=1 S... [more]
CHI12_ORYSJ2.072e-6051.56Chitinase 12 OS=Oryza sativa subsp. japonica GN=Ch... [more]
CHIA_SOLLC4.605e-6049.47Acidic 26 kDa endochitinase OS=Solanum lycopersicu... [more]
CHIT_PETHY1.021e-5952.66Acidic endochitinase OS=Petunia hybrida PE=2 SV=1[more]
CHI8_ORYSJ2.261e-5953.44Chitinase 8 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHID_SOLLC2.306e-5951.71Basic endochitinase (Fragment) OS=Solanum lycopers... [more]
CHIP_TOBAC8.523e-5951.60Acidic endochitinase P OS=Nicotiana tabacum PE=1 S... [more]
CHI10_ORYSJ5.384e-5548.42Chitinase 10 OS=Oryza sativa subsp. japonica GN=Ch... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_12F12_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-12F12-K24-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043671 ID=CX043671; Name=CX043671; organism=Citrus sinensis; type=EST; length=849bp
TTTTTTTTTTTTTTTTTGATGGAGAAGACTCATTGATCCATGTTGGATCA
GTCTTATTTAATTTACTTACAATAAGAGCGTAACAAACTAACAATTTAGT
TGTCCACCTACAAGTGTGACATCTAAAGTTTTTATTAAGTAGCTTTTATT
AAGCTTATTTTACTAAAACGTTGATCATGATGATCACATAGATTGTGCCA
TCAGATTAAGGCCATAAGGCCGTTGGTTGGAGCAATCAAGATTGTCACCA
GGCTGAATCCCAAACTTGCCACAGAAAGTGGTAAAGAACCCAATACGGTT
ACGTACAGCGTCATTCCCAACGTAGCCACATTCAATTCCACCGTTGATTA
TATTTGTGGTTAGACCGTATCCCGGAAGCCGGCCGGCGTTTACGTCATTT
GCTGATGGTTTCCATTCGTCGATAATGACTTCGTGGCACGATGGCTTTGG
TGGCTGTGCAGTCATCCAGAACCAGATTGCTGACTTGAATGATAGTACTG
GATCAGTGGCAAGTAGGTCTGGATTGTTCAACAAGTCCACCCCCAAGGCT
TCTCCGCACCTTAAGTAATTGCAATTCCAAGTGAGTTGAATTGGACCTCG
GCCATAGTATTGCCCTGGCAAGGGACATGGACAGTAAGGATAACAGTAGT
CGGACGACGCAGGGCTAACTTGCCTAATATAGCAATATCCCCAAGCATAT
TCTCCACCAGGTGCATCGGTCCATCCCCCAGTAGTTTCATGGCCAGTTTG
GGCAAAAAAAGGCAGCAATTTCTCTTTTACGCATGGTTTCATTTCCAGAG
TTACCAAAGCCTGGAAAAGCTTGGGCTGCCTCTATAAAAGCATCATAAG
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