CX043671
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX043671 vs. ExPASy Swiss-Prot
Match: AGI_URTDI (Lectin/endochitinase 1 OS=Urtica dioica GN=UDA1 PE=1 SV=3) HSP 1 Score: 119.783 bits (299), Expect = 1.971e-26 Identity = 72/197 (36.55%), Postives = 105/197 (53.30%), Query Frame = -1 Query: 238 FQALVTLEMKPCVKEKLLPFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXPLPGQYYG-RGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGND--AVR-NRIGFFTTFCGKFGIQPGDNL 816 F A T+ K ++ F A T+G +D +AWG C+I + +D G+ Y RGPIQLT N NY G+A+G DL+ NPDL+ DP++SFK+A+WFWM+ KPSCH++++ +AN A R+P G+ NII+ G+D AVR + IGF+ +C G+ G +L Sbjct: 167 FPAFGTIGDVATRKREVAAFLAHISQATSGERSDVEN-PHAWGLCHINTTTVTENDFCTSSDWPCAAGKKYSPRGPIQLTHNFNYGLAGQAIGEDLIQNPDLVEKDPIISFKTALWFWMSQHDNKPSCHDIVL-----NANSA-ANRIPNKGVIGNIISRAF-----GHDDFAVRSSSIGFYKRYCDMLGVSYGHDL 351
BLAST of CX043671 vs. ExPASy Swiss-Prot
Match: CHIB_MAIZE (Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.196e-26 Identity = 57/184 (30.98%), Postives = 88/184 (47.83%), Query Frame = -1 Query: 232 KEKLLPFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASS--DXXXXXXXXPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDC 777 K ++ FFA HET +CYI +++ +++ D +YYGRGP+Q++WN NY G A+G D L +P +A D V++FK+A+WFWM S H V+ G+G TT + +ECG + R+G++ +C + G+ PG NL C Sbjct: 120 KREIAAFFAHATHETGH-------------FCYISEINKSNAYCDPTKRQWPCAAGQKYYGRGPLQISWNYNYGPAGRAIGFDGLGDPGRVARDAVVAFKAALWFWMN------SVHGVVPQ---------------GFGATTRAMQRALECGGNNPAQMNARVGYYRQYCRQLGVDPGPNLTC 269 HSP 2 Score: 37.7354 bits (86), Expect = 2.196e-26 Identity = 15/29 (51.72%), Postives = 21/29 (72.41%), Query Frame = -3 Query: 755 AFIEAAQAFPGFGNSGNETMRKREIAAFF 841 AF+ A + +PGF + G++ KREIAAFF Sbjct: 99 AFLSAVKGYPGFAHGGSQVQGKREIAAFF 127
BLAST of CX043671 vs. ExPASy Swiss-Prot
Match: CHI4_BRANA (Basic endochitinase CHB4 OS=Brassica napus PE=1 SV=2) HSP 1 Score: 107.457 bits (267), Expect = 1.809e-25 Identity = 54/155 (34.84%), Postives = 88/155 (56.77%), Query Frame = -1 Query: 232 YCYIRQVSPASSDXXXXXXXXP--LPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDC 687 +CYI +++ AS D PG+ Y+GRGPIQL+WN NY CG++L ++LL P+L++++P ++F++ +WFWM + P ++++ G+G T IN G+EC + AV RI ++ +CG+ G+ PG NL C Sbjct: 136 FCYIEEINGASRDYCDENNRQYPCAPGKGYFGRGPIQLSWNYNYGACGQSLNLNLLGQPELVSSNPTVAFRTGLWFWMNSVRP-------VLNQ--------------GFGATIRAIN-GMECNGGNSGAVNARIRYYRDYCGQLGVDPGPNLSC 268 HSP 2 Score: 29.6462 bits (65), Expect = 1.809e-25 Identity = 15/30 (50.00%), Postives = 18/30 (60.00%), Query Frame = -3 Query: 755 DAFIEAAQAFPGFGNSGNETMRKREIAAFF 844 D+FI AA FP F NS + +REIA F Sbjct: 101 DSFINAANTFPNFANS----VTRREIATMF 126
BLAST of CX043671 vs. ExPASy Swiss-Prot
Match: CHIA_MAIZE (Endochitinase A OS=Zea mays PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 3.062e-25 Identity = 54/184 (29.35%), Postives = 87/184 (47.28%), Query Frame = -1 Query: 232 KEKLLPFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASS--DXXXXXXXXPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDC 777 K ++ FFA HET +CYI +++ +++ D +YYGRGP+Q++WN NY G +G + L +P+ +A D V++FK+A+WFWM N+V+ G+G T ING +EC + R+G++ +C + + PG NL C Sbjct: 131 KREIAAFFAHVTHETGH-------------FCYISEINKSNAYCDASNRQWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWM---------------------NNVHGVMPQGFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQLRVDPGPNLIC 280 HSP 2 Score: 38.891 bits (89), Expect = 3.062e-25 Identity = 17/29 (58.62%), Postives = 20/29 (68.97%), Query Frame = -3 Query: 755 AFIEAAQAFPGFGNSGNETMRKREIAAFF 841 AF+ A A+PGF + G E KREIAAFF Sbjct: 110 AFLSAVNAYPGFAHGGTEVEGKREIAAFF 138
BLAST of CX043671 vs. ExPASy Swiss-Prot
Match: CHI4_PHAVU (Endochitinase PR4 OS=Phaseolus vulgaris GN=CHI4 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 7.234e-24 Identity = 53/156 (33.97%), Postives = 77/156 (49.36%), Query Frame = -1 Query: 232 YCYIRQVSPASSDXXXXXXXXPLPGQ----YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDC 687 +CYI ++ AS D P Y+GRGPIQL+WN NY G A D L P+ ++ D V+SFK+A+W+WM Q +P ++ G+G T ING +EC V+ R+ ++T +C + G+ GDNL C Sbjct: 136 FCYIEEIDGASKDYCDEESIAQYPCSSSKGYHGRGPIQLSWNFNYGPAGSANNFDGLGAPETVSNDVVVSFKTALWYWM--QHVRPVINQ-------------------GFGATIRAINGALECDGANPTTVQARVNYYTEYCRQLGVATGDNLTC 270 HSP 2 Score: 31.9574 bits (71), Expect = 7.234e-24 Identity = 15/30 (50.00%), Postives = 19/30 (63.33%), Query Frame = -3 Query: 755 DAFIEAAQAFPGFGNSGNETMRKREIAAFF 844 DAF+ A ++ FG G+E KREIAA F Sbjct: 97 DAFLSALNSYTDFGRVGSEDDSKREIAAAF 126
BLAST of CX043671 vs. ExPASy Swiss-Prot
Match: CHI4_ARAHY (Endochitinase 4 (Fragment) OS=Arachis hypogaea PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.339e-11 Identity = 29/46 (63.04%), Postives = 36/46 (78.26%), Query Frame = -1 Query: 328 MTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIEC 465 MT Q KPSCH+VI + W+P+A D AGR PGYG+ TNIINGG++C Sbjct: 1 MTPQGNKPSCHDVITNAWRPTATDSAAGRAPGYGVITNIINGGLDC 46 The following BLAST results are available for this feature:
BLAST of CX043671 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043671 ID=CX043671; Name=CX043671; organism=Citrus sinensis; type=EST; length=849bpback to top |