DC900317
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900317 vs. ExPASy Swiss-Prot
Match: SAR1_PICST (Small COPII coat GTPase SAR1 OS=Pichia stipitis GN=SAR1 PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 4.418e-36 Identity = 81/156 (51.92%), Postives = 99/156 (63.46%), Query Frame = 2 Query: 2 LHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKXXXXXXXXXXXXXXXXXKERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 469 LHMLK++RL QPT +PTSEEL+IG ++F FDLGGHQ ARR+WK ERFAESK +VPFL+LGNKID+P A E EL+ LGL N TTGK L + + RP+EV+M S+V + GYG+GFKWLSQYI Sbjct: 37 LHMLKNDRLATLQPTLHPTSEELAIGSVRFTTFDLGGHQQARRLWKDYFPEVNGIVFLVDAADPERFAESKAELESLFKIEELSHVPFLILGNKIDVPTAVGEMELKSALGLYN-TTGKDTGKLPEGS-RPIEVYMVSVVMRSGYGEGFKWLSQYI 190
BLAST of DC900317 vs. ExPASy Swiss-Prot
Match: SAR1_DEBHA (Small COPII coat GTPase SAR1 OS=Debaryomyces hansenii GN=SAR1 PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 4.418e-36 Identity = 83/156 (53.21%), Postives = 97/156 (62.18%), Query Frame = 2 Query: 2 LHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKXXXXXXXXXXXXXXXXXKERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 469 LHMLK++RL QPT +PTSEEL+IG ++F FDLGGHQ ARR+WK ERFAESK +VPFL+LGNKID A E EL+ LGL N TTGK L + RP+EVFM S+V +MGYGDGFKWLSQYI Sbjct: 37 LHMLKNDRLATLQPTLHPTSEELAIGSVRFTTFDLGGHQQARRLWKDYFPEVNGIVFLVDAADPERFAESKAELESLFKIEELASVPFLILGNKIDASSAVGEMELKSALGLYN-TTGKDTGKLPEGQ-RPIEVFMVSVVMRMGYGDGFKWLSQYI 190
BLAST of DC900317 vs. ExPASy Swiss-Prot
Match: SAR1_PHANO (Small COPII coat GTPase SAR1 OS=Phaeosphaeria nodorum GN=SAR1 PE=3 SV=2) HSP 1 Score: 150.599 bits (379), Expect = 9.843e-36 Identity = 79/156 (50.64%), Postives = 97/156 (62.18%), Query Frame = 2 Query: 2 LHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKXXXXXXXXXXXXXXXXXKERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 469 LHMLK++R+ QPT +PTSEELSIG +KF FDLGGH ARR+W+ ER ESK N PF++LGNKID P A SE++LR LGL TTGKGKV L +RP+EVFMCS+V + GYG+G +WLSQY+ Sbjct: 33 LHMLKNDRVAVLQPTLHPTSEELSIGNVKFTTFDLGGHAQARRLWRDYFPEVSGIVFLVDAKDHERLNESKAELDALLAMEELKNTPFVILGNKIDHPEAVSEDQLRATLGLYQ-TTGKGKVPL--EGIRPIEVFMCSVVMRQGYGEGIRWLSQYV 185
BLAST of DC900317 vs. ExPASy Swiss-Prot
Match: SAR1_NEUCR (Small COPII coat GTPase sar-1 OS=Neurospora crassa GN=sar-1 PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 9.843e-36 Identity = 79/156 (50.64%), Postives = 97/156 (62.18%), Query Frame = 2 Query: 2 LHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKXXXXXXXXXXXXXXXXXKERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 469 LHMLK++R+ QPT +PTSEELS+G +KF FDLGGHQ ARR+WK ER E+K VPF+VLGNKID P A SE+ELR LGL TTGKG+V L +RP+EVFMCS+V + GYG+ +WLSQY+ Sbjct: 37 LHMLKNDRVAILQPTLHPTSEELSVGNVKFTTFDLGGHQQARRLWKDYFPEVNGIVFLVDAKDHERLPEAKAEIDALLSMEELAKVPFVVLGNKIDHPEAVSEDELRQRLGLWQ-TTGKGRVPL--EGIRPIEVFMCSVVMRQGYGEAIRWLSQYV 189
BLAST of DC900317 vs. ExPASy Swiss-Prot
Match: SAR1_LODEL (Small COPII coat GTPase SAR1 OS=Lodderomyces elongisporus GN=SAR1 PE=3 SV=2) HSP 1 Score: 150.599 bits (379), Expect = 9.843e-36 Identity = 81/156 (51.92%), Postives = 96/156 (61.54%), Query Frame = 2 Query: 2 LHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKXXXXXXXXXXXXXXXXXKERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 469 LHMLK++RL QPT +PTSEEL+IG ++F FDLGGHQ ARR+WK ERFAESK VPF++LGNKID+P A E EL+ LGL N TTGK L + RP+EVFM S+V + GYGD FKWLSQYI Sbjct: 37 LHMLKNDRLATLQPTLHPTSEELAIGSVRFTTFDLGGHQQARRLWKDYFPEVNGIVFLVDAADSERFAESKAELESLFKIEELSQVPFVILGNKIDVPTAVGEMELKNALGLYN-TTGKDTGKLPEGQ-RPIEVFMVSVVMRSGYGDAFKWLSQYI 190
BLAST of DC900317 vs. ExPASy Swiss-Prot
Match: SAR1_SCHPO (Small COPII coat GTPase sar1 OS=Schizosaccharomyces pombe GN=sar1 PE=1 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.285e-35 Identity = 79/156 (50.64%), Postives = 99/156 (63.46%), Query Frame = 2 Query: 2 LHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKXXXXXXXXXXXXXXXXXKERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 469 LHMLK++RL QPT +PTSEEL+IG ++F FDLGGHQ ARR+W+ ER +ESK VPFL+LGNKID P A SE+EL+ LGL TTGKG V+ +RP+EVFMCS+V + GYG+GFKWL+QY+ Sbjct: 37 LHMLKNDRLAVMQPTLHPTSEELAIGNVRFTTFDLGGHQQARRLWRDYFPEVNGIVYLVDCCDFERLSESKAELDALLAMEELARVPFLILGNKIDAPGAISEDELKAALGLYQ-TTGKG-VSKPVPGIRPIEVFMCSVVLRQGYGEGFKWLAQYV 190
BLAST of DC900317 vs. ExPASy Swiss-Prot
Match: SAR1_ASPNG (Small COPII coat GTPase SAR1 OS=Aspergillus niger GN=sar1 PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.285e-35 Identity = 79/156 (50.64%), Postives = 98/156 (62.82%), Query Frame = 2 Query: 2 LHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKXXXXXXXXXXXXXXXXXKERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 469 LHMLK++R+ QPT +PTSEEL+IG +F FDLGGHQ ARR+WK E F ESK VPFL+LGNKID P A SE+++R+ LGL TTGKGKV L +RP+EVFMCS+V + GYG+G +WLSQY+ Sbjct: 37 LHMLKNDRVAILQPTAHPTSEELAIGNNRFTTFDLGGHQQARRLWKDYFPEVSGIVFLVDAKDHECFPESKAELDALLAMEELAKVPFLILGNKIDHPDAVSEDDVRHQLGLYQ-TTGKGKVPL--EGIRPIEVFMCSVVMRQGYGEGIRWLSQYV 189
BLAST of DC900317 vs. ExPASy Swiss-Prot
Match: SAR1_CANAL (Small COPII coat GTPase SAR1 OS=Candida albicans GN=SAR1 PE=3 SV=2) HSP 1 Score: 148.673 bits (374), Expect = 3.740e-35 Identity = 80/156 (51.28%), Postives = 96/156 (61.54%), Query Frame = 2 Query: 2 LHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKXXXXXXXXXXXXXXXXXKERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 469 LHMLK++RL QPT +PTSEEL+IG ++F FDLGGHQ ARR+WK ERFAESK VPF++LGNKID+P A E EL+ LGL N TTGK L + RP+EVFM S+V + GYG+ FKWLSQYI Sbjct: 37 LHMLKNDRLATLQPTLHPTSEELAIGSVRFTTFDLGGHQQARRLWKDYFPEVNGIVFLVDAADTERFAESKAELESLFRIEELSQVPFVILGNKIDVPTAVGEMELKNALGLYN-TTGKDTGKLPE-GTRPIEVFMVSVVMRSGYGEAFKWLSQYI 190
BLAST of DC900317 vs. ExPASy Swiss-Prot
Match: SAR1_PICPG (Small COPII coat GTPase SAR1 OS=Pichia pastoris (strain GS115) GN=SAR1 PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 6.380e-35 Identity = 82/156 (52.56%), Postives = 94/156 (60.26%), Query Frame = 2 Query: 2 LHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKXXXXXXXXXXXXXXXXXKERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 469 LHMLK++RL QPT +PTSEELSIG ++F FDLGGH+ ARRVWK ERF ES+ VP LVLGNKID A SE ELR+ LGL TTGK KV L + RPLEVF CSI + GYG+G +WLSQYI Sbjct: 37 LHMLKNDRLATLQPTWHPTSEELSIGNVRFTTFDLGGHEQARRVWKDYFPEVDGIVYLVDIADPERFEESRVELDALLKIEELSKVPVLVLGNKIDKSTAVSENELRHALGLMT-TTGKDKVQLVEGQ-RPLEVFTCSIYLRQGYGEGIRWLSQYI 190
BLAST of DC900317 vs. ExPASy Swiss-Prot
Match: SAR1A_DICDI (GTP-binding protein Sar1A OS=Dictyostelium discoideum GN=sarA PE=1 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 8.332e-35 Identity = 78/156 (50.00%), Postives = 101/156 (64.74%), Query Frame = 2 Query: 2 LHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKXXXXXXXXXXXXXXXXXKERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 469 L +LKD RL + PT +PTSEEL++G I+FKAFDLGGH+ ARR+WK ++RF ESKK NVPFL+LGNK+DI SEE+ R LGL+ TTGKGK L + VRP+EVFMCS+V++ GY +GF+WL+ Y+ Sbjct: 37 LGVLKDGRLSSYLPTFHPTSEELAMGNIRFKAFDLGGHESARRLWKDYYPSVDAIVYLIDSSAQDRFVESKKELDSLLSSDELANVPFLILGNKVDIG-NTSEEKFRASLGLTQ-TTGKGKTTL--NGVRPIEVFMCSVVKRYGYAEGFRWLANYL 188 The following BLAST results are available for this feature:
BLAST of DC900317 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 47
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DC900317 ID=DC900317; Name=DC900317; organism=Citrus sinensis; type=EST; length=817bpback to top |