CX043666

Overview
NameCX043666
Unique NameCX043666
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length870
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043666 vs. ExPASy Swiss-Prot
Match: GSTX4_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.724e-33
Identity = 80/207 (38.65%), Postives = 119/207 (57.49%), Query Frame = -3
Query:  209 SPFVYRVIWALKLKGVPYEFVAEDLSNKSALLLKHNPVHKKIPVLVHGGKPVCESMVILEYIEETWPQNP--LMPNNPYDRALARFWIKFAEDKGVAVW-KMFRSTGQELQNTMKEALEMLQTVEEHGLGEKKFFNGDNIGLVDLAFGSIVYWLQVIEDVAGVKIFESHKFPHLHAWIENFKQVPVIEEKLPNQDELLVALKLRREQ 820
            S F  R+  AL  K + YE+  EDL NKS LLL+ NP+HKKIPVL+H GKP+CES++ +EYIEE W      L+P++PYDRA ARFW  + + K      K++ + G+E +   K+ +E L+ V E  LG+K +F G++ G VD+A      W    E           + P   AW +   Q   + + LP+Q ++L  +K+ R++
Sbjct:   14 SMFGMRLRIALAEKEIKYEYKEEDLRNKSPLLLQMNPIHKKIPVLIHNGKPICESIIAVEYIEEVWKDKAPNLLPSDPYDRAQARFWADYIDKKLYDFGRKLWTTKGEEQEAAKKDFIECLK-VLEGALGDKPYFGGESFGFVDIALIGYYSWFYAYETFGNFS--TEAECPKFVAWAKRCMQRESVAKSLPDQPKVLEFVKVLRQK 217          
BLAST of CX043666 vs. ExPASy Swiss-Prot
Match: GSTXC_TOBAC (Probable glutathione S-transferase parC OS=Nicotiana tabacum GN=PARC PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.941e-33
Identity = 79/207 (38.16%), Postives = 119/207 (57.49%), Query Frame = -3
Query:  209 SPFVYRVIWALKLKGVPYEFVAEDLSNKSALLLKHNPVHKKIPVLVHGGKPVCESMVILEYIEETWPQN--PLMPNNPYDRALARFWIKFAEDKGVAVW-KMFRSTGQELQNTMKEALEMLQTVEEHGLGEKKFFNGDNIGLVDLAFGSIVYWLQVIEDVAGVKIFESHKFPHLHAWIENFKQVPVIEEKLPNQDELLVALKLRREQ 820
            S F  R+  AL  K + YE+  EDL NKS LLL+ NP+HKKIPVL+H GKP+CES++ +EYIEE W      L+P++PYDRA ARFW  + + K      K++ + G+E +   K+ +E L+ V E  LG++ +F G++ G VD+A      W    E           + P   AW +   Q   + + LP+Q ++L  +K+ R++
Sbjct:   14 SMFGMRLRIALAEKEIKYEYKQEDLRNKSPLLLQMNPIHKKIPVLIHNGKPICESIIAVEYIEEVWKDKAPSLLPSDPYDRAQARFWADYIDKKLYDFGRKLWATKGEEQEAAKKDFIECLK-VLEGALGDRPYFGGESFGFVDIALIGFYSWFYAYETFGNFS--TEAECPKFVAWAKRCMQRESVAKSLPDQPKVLEFVKVLRQK 217          
BLAST of CX043666 vs. ExPASy Swiss-Prot
Match: GSTU1_ORYSI (Probable glutathione S-transferase GSTU1 OS=Oryza sativa subsp. indica GN=GSTU1 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.150e-27
Identity = 76/210 (36.19%), Postives = 115/210 (54.76%), Query Frame = -3
Query:  239 LSPFVYRVIWALKLKGVPYEFVAEDLSNKSALLLKHNPVHKKIPVLVHGGKPVCESMVILEYIEETWPQNP--LMPNN------PYDRALARFWIKFAE----DKGVAVWKMFRSTGQELQNTMKEALEMLQTVEEHGLGEKKFF---NGDNIGLVDLAFGSIVYWLQVIEDVAGVKIFESHKFPHLHAWIENFKQVPVIEEKLPNQDEL 823
            +SPF  R   A+  KG+ +E+  EDL NKS LLL+ NPVH+KIPVL+H G+PV ES+VIL+Y+++ +P  P  L P N       Y RA ARFW  + +    D G  +W++    G+      +E  E+L+T+E   LG+++FF    G  +G VD+A      W    E   G  + E    P L AW     ++  + + LP+ +++
Sbjct:   14 VSPFGQRCRIAMAEKGLEFEYREEDLGNKSDLLLRSNPVHRKIPVLLHAGRPVSESLVILQYLDDAFPGTPHLLSPANSGDADAAYARATARFWADYVDRKLYDCGSRLWRL---KGEPQAAAGREMAEILRTLEAE-LGDREFFGGGGGGRLGFVDVALVPFTAWFYSYERCGGFSVEE--VAPRLAAWARRCGRIDSVAKHLPSPEKV 217          
BLAST of CX043666 vs. ExPASy Swiss-Prot
Match: GSTU1_ORYSJ (Probable glutathione S-transferase GSTU1 OS=Oryza sativa subsp. japonica GN=GSTU1 PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.372e-27
Identity = 76/210 (36.19%), Postives = 115/210 (54.76%), Query Frame = -3
Query:  239 LSPFVYRVIWALKLKGVPYEFVAEDLSNKSALLLKHNPVHKKIPVLVHGGKPVCESMVILEYIEETWPQNP--LMPNN------PYDRALARFWIKFAE----DKGVAVWKMFRSTGQELQNTMKEALEMLQTVEEHGLGEKKFF---NGDNIGLVDLAFGSIVYWLQVIEDVAGVKIFESHKFPHLHAWIENFKQVPVIEEKLPNQDEL 823
            +SPF  R   A+  KG+ +E+  EDL NKS LLL+ NPVH+KIPVL+H G+PV ES+VIL+Y+++ +P  P  L P N       Y RA ARFW  + +    D G  +W++    G+      +E  E+L+T+E   LG+++FF    G  +G VD+A      W    E   G  + E    P L AW     ++  + + LP+ +++
Sbjct:   14 VSPFGQRCRIAMAEKGLEFEYREEDLGNKSDLLLRSNPVHRKIPVLLHAGRPVSESLVILQYLDDAFPGTPHLLPPANSGDADAAYARATARFWADYVDRKLYDCGSRLWRL---KGEPQAAAGREMAEILRTLEAE-LGDREFFGGGGGGRLGFVDVALVPFTAWFYSYERCGGFSVEE--VAPRLAAWARRCGRIDSVVKHLPSPEKV 217          
BLAST of CX043666 vs. ExPASy Swiss-Prot
Match: GSTX2_MAIZE (Probable glutathione S-transferase BZ2 OS=Zea mays GN=BZ2 PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.048e-22
Identity = 72/220 (32.73%), Postives = 120/220 (54.55%), Query Frame = -3
Query:  236 VKLHGALLSPFVYRVIWALKLKGVPYEFVAEDLS-NKSALLLKHNPVHKKIPVLV-HGGKPVCESMVILEYIEETWPQNP-------LMPNNPYDRALARFWIKFAEDK------GVAVWKMFRSTGQELQNTMKEALEMLQTVEEHGLGEKKFFNGDNI--GLVDLAFGSIVYWLQVIEDVAGVKIFESHKFPHLHAWIENFKQVPVIEEKLPNQDELL 844
            +++ G  +SPF  R   AL L+GV YE + E L   KS  LL  NPV+ KIPVL+   G+ +CES VI++YIE+   ++        L+P++PY+RA+ RFW  F +DK       V++     +  Q  ++T + AL +L+   +     + FF+G +   GL+DLA G  +  L+  E + G+ + ++   P L  W + F   P  +  LP+ ++++
Sbjct:    1 MRVLGGEVSPFTARARLALDLRGVAYELLDEPLGPKKSDRLLAANPVYGKIPVLLLPDGRAICESAVIVQYIEDVARESGGAEAGSLLLPDDPYERAMHRFWTAFIDDKFWPALDAVSLAPTPGARAQAAEDT-RAALSLLEEAFKDRSNGRAFFSGGDAAPGLLDLALGCFLPALRACERLHGLSLIDASATPLLDGWSQRFAAHPAAKRVLPDTEKVV 219          
BLAST of CX043666 vs. ExPASy Swiss-Prot
Match: GSTO1_MOUSE (Glutathione S-transferase omega-1 OS=Mus musculus GN=Gsto1 PE=2 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 2.588e-13
Identity = 55/194 (28.35%), Postives = 95/194 (48.97%), Query Frame = -3
Query:  272 EVKLHGALLSPFVYRVIWALKLKGVPYEFVAEDLSNKSALLLKHNPVHKKIPVLVHG-GKPVCESMVILEYIEETWPQNPLMPNNPYDRALARFWIKFAEDKGVAVWKMFRSTGQELQNTMKEALE-MLQTVEEHGLGEKKFFNGDNIGLVDLAFGSIVYWLQVIEDVAGVKIFESHKFPHLHAWIENFKQVPV 847
            +++++     PF  R +  LK KG+ +E +  +L NK     + NP+   +PVL +  G  V ES++  EY++E +P+  L P++PY +A  +  ++        +    RS  +E    ++EALE   + +EE     K F  GD+  +VD        W Q +E +  +K   +H  P L  W+   +Q PV
Sbjct:   23 QIRVYSMRFCPFAQRTLMVLKAKGIRHEVININLKNKPEWFFEKNPLGL-VPVLENSQGHLVTESVITCEYLDEAYPEKKLFPDDPYKKARQKMTLESFSKVPPLIASFVRSKRKEDSPNLREALENEFKKLEEGMDNYKSFLGGDSPSMVDYLTWP---WFQRLEALE-LKECLAHT-PKLKLWMAAMQQDPV 210          
BLAST of CX043666 vs. ExPASy Swiss-Prot
Match: GSTO1_HUMAN (Glutathione S-transferase omega-1 OS=Homo sapiens GN=GSTO1 PE=1 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 3.381e-13
Identity = 56/205 (27.32%), Postives = 96/205 (46.83%), Query Frame = -3
Query:  242 VKLHGALLSPFVYRVIWALKLKGVPYEFVAEDLSNKSALLLKHNPVHKKIPVLVHG-GKPVCESMVILEYIEETWPQNPLMPNNPYDRALARFWIKFAEDKGVAVWKMFRSTGQELQNTMKEALEMLQTVEEHGLGEKK--FFNGDNIGLVDLAFGSIVYWLQVIEDVAGVKIFES-HKFPHLHAWIENFKQVPVIEEKLPNQDE 844
            ++++     PF  R    LK KG+ +E +  +L NK     K NP    +PVL +  G+ + ES +  EY++E +P   L+P++PY++A  +  ++        V    RS  +E    +KE      T  E  L  KK  FF G++I ++D     I  W + +E    +K+ E     P L  W+   K+ P +   L ++ +
Sbjct:   24 IRIYSMRFCPFAERTRLVLKAKGIRHEVININLKNKPEWFFKKNPFGL-VPVLENSQGQLIYESAITCEYLDEAYPGKKLLPDDPYEKACQKMILELFSKVPSLVGSFIRSQNKEDYAGLKEEFRKEFTKLEEVLTNKKTTFFGGNSISMIDYL---IWPWFERLE---AMKLNECVDHTPKLKLWMAAMKEDPTVSALLTSEKD 221          
BLAST of CX043666 vs. ExPASy Swiss-Prot
Match: GSTO1_RAT (Glutathione S-transferase omega-1 OS=Rattus norvegicus GN=Gsto1 PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 1.285e-12
Identity = 49/195 (25.13%), Postives = 94/195 (48.21%), Query Frame = -3
Query:  272 EVKLHGALLSPFVYRVIWALKLKGVPYEFVAEDLSNKSALLLKHNPVHKKIPVLVHG-GKPVCESMVILEYIEETWPQNPLMPNNPYDRALARFWIKFAEDKGVAVWKMFRSTGQELQNTMKEALEMLQTVEEHGLGEKK--FFNGDNIGLVDLAFGSIVYWLQVIEDVAGVKIFESHKFPHLHAWIENFKQVPV 847
            +++++     PF  R +  LK KG+ +E +  +L NK     + NP    +PVL +  G  + ES++  EY++E +P+  L P++PY++A  +   +        V    R+  +E    +KE L+   +  E  +  K+  FF G+++ ++D     I  W Q +E +   +  +    P L  W+   ++ PV
Sbjct:   23 QIRVYSMRFCPFAQRTLMVLKAKGIRHEIININLKNKPEWFFEKNPFGL-VPVLENTQGHLITESVITCEYLDEAYPEKKLFPDDPYEKACQKMTFELFSKVPSLVTSFIRAKRKEDHPGIKEELKKEFSKLEEAMANKRTAFFGGNSLSMIDYL---IWPWFQRLEALELNECID--HTPKLKLWMATMQEDPV 211          
The following BLAST results are available for this feature:
BLAST of CX043666 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
GSTX4_TOBAC1.724e-3338.65Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTXC_TOBAC2.941e-3338.16Probable glutathione S-transferase parC OS=Nicotia... [more]
GSTU1_ORYSI3.150e-2736.19Probable glutathione S-transferase GSTU1 OS=Oryza ... [more]
GSTU1_ORYSJ5.372e-2736.19Probable glutathione S-transferase GSTU1 OS=Oryza ... [more]
GSTX2_MAIZE1.048e-2232.73Probable glutathione S-transferase BZ2 OS=Zea mays... [more]
GSTO1_MOUSE2.588e-1328.35Glutathione S-transferase omega-1 OS=Mus musculus ... [more]
GSTO1_HUMAN3.381e-1327.32Glutathione S-transferase omega-1 OS=Homo sapiens ... [more]
GSTO1_RAT1.285e-1225.13Glutathione S-transferase omega-1 OS=Rattus norveg... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS07_12F09_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-12F09-K18-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043666 ID=CX043666; Name=CX043666; organism=Citrus sinensis; type=EST; length=870bp
TTTTTTTTAGACAAATCGAGTCCCTTATTTTATTATTCATATCCATCAAA
AGTAACCACATGCTAGTCCCCCGAACTTAGCATAATACGGTGATTTAAAA
AAAGAAAAAAAAAGGAACGTTTTTAGACACCAAAACAAAAGCAAAACAAA
CACAAAGCGAGACATACAAACAAATTTTATGCTACTGCATTCAAGCAGAA
GCCATCAACTGTTCACGACGAAGTTTGAGAGCAACCAATAGTTCATCCTG
ATTAGGAAGCTTTTCTTCAATCACAGGGACTTGCTTGAAATTTTCAATCC
AGGCATGCAAGTGAGGGAATTTGTGTGATTCAAATATTTTAACTCCCGCT
ACATCTTCAATGACTTGCAACCAATAAACAATTGAACCAAACGCTAGGTC
CACTAAGCCAATATTGTCTCCATTGAAAAATTTTTTCTCTCCCAAGCCAT
GCTCTTCAACGGTTTGTAGCATTTCCAAGGCTTCCTTCATTGTGTTTTGT
AGTTCTTGTCCAGTGCTACGAAACATTTTCCAAACAGCAACACCCTTGTC
TTCGGCGAATTTAATCCAGAATCGAGCAAGAGCTCTATCATAAGGATTAT
TTGGCATCAAGGGATTCTGTGGCCACGTCTCTTCGATGTATTCGAGAATA
ACCATGGACTCACAAACTGGTTTTCCGCCATGGACAAGCACTGGGATCTT
CTTGTGAACCGGATTGTGCTTCAAAAGCAAAGCACTTTTGTTTGAGAGAT
CTTCTGCAACAAATTCATATGGCACGCCTTTCAATTTCAGAGCCCAAATC
ACCCTGTAAACAAATGGACTCAGCAGTGCCCCATGAAGCTTCACTTCAGC
CATGATAATTCTTAGGTTGA
back to top