DC900313
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH601_RHILO (60 kDa chaperonin 1 OS=Rhizobium loti GN=groL1 PE=3 SV=1) HSP 1 Score: 245.743 bits (626), Expect = 3.223e-64 Identity = 123/237 (51.90%), Postives = 165/237 (69.62%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELP 712 +D+AVLT G +I+E+LG+ LE V ++MLG K+V I KD T I+DGAG K +I+ R QI+ IE +TSDYDKEKLQERLAKLSGGVAV+++GG +E+EV EKKDR+ DALNAT+AAVEEGIVPGGGV + AN D G+ I+ AL+ P+ I KL + + +LG+DA YVDM+K+GI+DP KV+RTAL DA S+++L+ T EA++ ++P Sbjct: 290 EDIAVLTAGQMISEDLGIKLENVTIEMLGRAKRVLIEKDTTTIIDGAGTKATIQARVAQIKGQIEETTSDYDKEKLQERLAKLSGGVAVIRVGGVTESEVKEKKDRIDDALNATRAAVEEGIVPGGGVALLRARSALSGLNGANADVTAGISIVLRALEAPIRQIAENSGVEGSIVVGKLADSKDHNLGFDAQNETYVDMIKAGIVDPAKVVRTALQDAGSIAALLITAEAMITDIP 526
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH603_RHIME (60 kDa chaperonin 3 OS=Rhizobium meliloti GN=groL3 PE=3 SV=1) HSP 1 Score: 245.358 bits (625), Expect = 4.210e-64 Identity = 123/238 (51.68%), Postives = 167/238 (70.17%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPK 715 +D+AVLT G +I+E+LG+ LE V LDMLG ++V I KD T I+DG+GDK SI+ R QI++ IE + SDYDKEKLQERLAKL+GGVAV+++GGA+E EV EKKDR+ DALNAT+AAVEEGIVPGGGV + N D G+ I++ AL+ P+ I KL++ + + G+DA YVDM+K+GI+DP KV+RTAL DA S++SL+ T EA++ ++P+ Sbjct: 290 EDIAVLTAGQMISEDLGIKLENVTLDMLGRARRVLIEKDTTTIIDGSGDKASIQARVSQIKAQIEETASDYDKEKLQERLAKLAGGVAVIRVGGATELEVKEKKDRIDDALNATRAAVEEGIVPGGGVALLRAKSALVGLTDDNADVTAGISIVRRALEAPIRQIADNAGVEGSIVVGKLVDGRDHNQGFDAQTETYVDMIKAGIVDPAKVVRTALRDAGSIASLLITAEAMIADIPE 527
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH602_RHISN (60 kDa chaperonin 2 OS=Rhizobium sp. (strain NGR234) GN=groL2 PE=3 SV=1) HSP 1 Score: 245.358 bits (625), Expect = 4.210e-64 Identity = 126/244 (51.64%), Postives = 171/244 (70.08%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEAP 733 +D+A+LTGG I+E+LG+ LE V LDMLG KKV + K++T I+DGAG K IE R QI++ IE +TSDYD+EKLQERLAKL+GGVAV+++GG++E EV E+KDRV DA++AT+AAVEEG++PGGGV T N DQ+ G++I++ A++ PV I KL E+ G++A E+ D+ + G+IDP+KV+RTAL DAASV+ L+ TTEA+V E PK KEAP Sbjct: 290 EDIAILTGGTAISEDLGIKLENVTLDMLGRAKKVVVEKENTTIVDGAGSKTEIEGRVAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGSTEVEVKERKDRVDDAMHATRAAVEEGVLPGGGVALLRAVKALDRVQTENPDQRHGIEIVRRAIEAPVRQIAENAGAEGSIIVGKLREKTEFGYGWNAQTNEFGDLFEQGVIDPVKVVRTALQDAASVAGLLITTEAMVAEKPK--KEAP 531
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH601_GLUDA (60 kDa chaperonin 1 OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) GN=groL1 PE=3 SV=1) HSP 1 Score: 244.973 bits (624), Expect = 5.498e-64 Identity = 128/244 (52.46%), Postives = 173/244 (70.90%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEAP 733 +D+A+LTGG +I+E+LG+ LE V L MLG KKV I K++T I++GAG I+ RC QIR+ IE +TSDYD+EKLQERLAKL+GGVAV+++GG++E EV E+KDRV DAL+AT+AAVEEGIVPGGG N DQ++G +II+ AL+ P+ I K+LE ++ + G+DA G+Y D+V +GIIDP KV+RTAL DA+SV+ L+ TTEA+V E P+ K+AP Sbjct: 290 EDIAILTGGQVISEDLGIKLETVTLAMLGRAKKVRIEKENTTIVEGAGASDDIKGRCGQIRAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGSTEVEVKERKDRVDDALHATRAAVEEGIVPGGGTALARASTALGNLHFHNDDQRVGAEIIRKALQAPLRQIAHNAGEDGAVIAGKVLESNDYNYGFDAQIGDYKDLVAAGIIDPTKVVRTALQDASSVAGLLITTEAMVAEKPE--KKAP 531
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH601_RHISN (60 kDa chaperonin 1 OS=Rhizobium sp. (strain NGR234) GN=groL1 PE=3 SV=1) HSP 1 Score: 244.588 bits (623), Expect = 7.181e-64 Identity = 126/244 (51.64%), Postives = 170/244 (69.67%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEAP 733 +D+A+LTGG I+E+LG+ LE V L+MLG KKV + K++T I+DGAG K I+ R QIR+ IE +TSDYD+EKLQERLAKL+GGVAV+++GG++E EV E+KDRV DA++AT+AAVEEG++PGGGV T N DQK G++I++ AL+ PV I KL E+ G++A E+ D+ G+IDP+KV+RTAL DAASV+ L+ TTEA+V E PK K+AP Sbjct: 290 EDIAILTGGTAISEDLGIKLENVTLNMLGRAKKVVVEKENTTIVDGAGSKSEIQGRVAQIRAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGSTEVEVKERKDRVDDAMHATRAAVEEGVLPGGGVALLRAVKALDSIRTENADQKHGIEIVRRALEAPVRQIAENAGAEGSIIVGKLREKTEFGFGWNAQTNEFGDLYDQGVIDPVKVVRTALQDAASVAGLLITTEAMVAEKPK--KDAP 531
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_ZYMMO (60 kDa chaperonin OS=Zymomonas mobilis GN=groL PE=3 SV=2) HSP 1 Score: 244.202 bits (622), Expect = 9.379e-64 Identity = 126/244 (51.64%), Postives = 177/244 (72.54%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEAP 733 +D+A+LT G+LI+E+LG+ LE V L+MLG+ K+V+I+K++T I+DGAGD+ +I++R E IRS IE +TSDYD+EKLQER+AKL+GGVAV+K+GGA+E EV E+KDRV DAL+AT+AAV+EGIVPGGG + N DQ+ G+ I++ AL+ PV I KL++ ++ +G++A +Y D+ +G+IDP KV+RTAL DAASV+ L+ TTEA V +LP E K AP Sbjct: 290 EDIAILTKGELISEDLGIKLENVTLNMLGSAKRVSITKENTTIVDGAGDQSTIKDRVEAIRSQIEATTSDYDREKLQERVAKLAGGVAVIKVGGATEVEVKERKDRVDDALHATRAAVQEGIVPGGGTALLYATKTLEGLNGVNEDQQRGIDIVRRALQAPVRQIAQNAGFDGAVVAGKLIDGNDDKIGFNAQTEKYEDLAATGVIDPTKVVRTALQDAASVAGLLITTEAAVGDLP-EDKPAP 532
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: HSP60_YEAST (Heat shock protein 60, mitochondrial OS=Saccharomyces cerevisiae GN=HSP60 PE=1 SV=1) HSP 1 Score: 243.817 bits (621), Expect = 1.225e-63 Identity = 125/240 (52.08%), Postives = 169/240 (70.42%), Query Frame = 2 Query: 5 DLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIE-NSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDL--GYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPK 715 D+AVLTGG + TEEL + E+ ++ LG+C +T++K+DTVIL+G+G K++I+ER EQI+ +I+ +T+ Y+KEKLQERLAKLSGGVAV+++GGASE EVGEKKDR DALNAT+AAVEEGI+PGGG NFDQK+GV II+ A+ P I KL+++ D GYDA+K EY DM+ +GIIDP KV+R+ LVDA+ V+SL+ TTE +V+ P+ Sbjct: 312 DIAVLTGGTVFTEELDLKPEQCTIENLGSCDSITVTKEDTVILNGSGPKEAIQERIEQIKGSIDITTTNSYEKEKLQERLAKLSGGVAVIRVGGASEVEVGEKKDRYDDALNATRAAVEEGILPGGGTALVKASRVLDEVVVDNFDQKLGVDIIRKAITRPAKQIIENAGEEGSVIIGKLIDEYGDDFAKGYDASKSEYTDMLATGIIDPFKVVRSGLVDASGVASLLATTEVAIVDAPE 551
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_PELUB (60 kDa chaperonin OS=Pelagibacter ubique GN=groL PE=3 SV=1) HSP 1 Score: 243.432 bits (620), Expect = 1.600e-63 Identity = 122/238 (51.26%), Postives = 161/238 (67.65%), Query Frame = 2 Query: 5 DLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKE 718 D+A+LTGG +I+E++G+ LE V L LG+CK+V + KD++ I+ G G K IE RC QI+ + +TSDYD+EKLQERLAKL+GGVAV+K+GGA+E EV E+KDRV DALNAT+AA EEGIV GGG DQK GV ++ AL+ P+ I KLLEQ+ ++GYDA EYVDM GIIDP+KV+RTAL DAAS++ L+ TTEA++ + P + Sbjct: 290 DIAILTGGQVISEDIGVKLENVKLTDLGSCKRVKVDKDNSTIISGNGKKSEIEARCAQIKQQVGETTSDYDREKLQERLAKLAGGVAVIKVGGATEVEVKERKDRVEDALNATRAAAEEGIVVGGGCALLYASQSLDTLKVKGDDQKAGVALVAKALQAPIRQITLNAGVDGSVVVGKLLEQNKKNMGYDAQNEEYVDMFAKGIIDPVKVVRTALQDAASIAGLLVTTEAMIADKPDD 527
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH602_SINMW (60 kDa chaperonin 2 OS=Sinorhizobium medicae (strain WSM419) GN=groL2 PE=3 SV=1) HSP 1 Score: 243.047 bits (619), Expect = 2.089e-63 Identity = 121/239 (50.63%), Postives = 170/239 (71.13%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKE 718 +D+A+LTGG +I+EELG LE +D+LG K+V + K+ T I+DGAG K I R QI++ IE++TSDYD+EKLQERLAKL+GGVAV+++GG++E EV EKKDRV DAL+AT+AAVEEGI+PGGGV +TAN DQ++G++I++ A++ PV I KL E+++ G++A GE+ D+ + G+IDP KV+R AL DAASV+ L+ TTEA++ E PK+ Sbjct: 290 EDIAILTGGTVISEELGTKLESATIDILGRAKRVMVEKETTTIVDGAGSKADIGGRVAQIKAQIEDTTSDYDREKLQERLAKLAGGVAVIRVGGSTEIEVKEKKDRVDDALHATRAAVEEGILPGGGVALLRVVSVLNGLATANDDQRVGIEIVRRAIEAPVRQIAENAGAEGSIIVGKLREKEDFAFGWNAQTGEFGDLFQMGVIDPAKVVRAALQDAASVAGLLVTTEAMIAEKPKK 528
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH602_RHIME (60 kDa chaperonin 2 OS=Rhizobium meliloti GN=groL2 PE=2 SV=2) HSP 1 Score: 242.662 bits (618), Expect = 2.729e-63 Identity = 119/239 (49.79%), Postives = 170/239 (71.13%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKE 718 +D+A+LTGG +I+EELG+ LE +D LG K++ + K+ T I+DGAG K+ I R QI++ IE++TSDYD+EKLQERLAKL+GGVAV+++GG++E EV EKKDRV DAL+AT+AAVEEGI+PGGGV +TAN DQ++G++I++ A++ PV I KL E+ + G++A GE+ D+ + G+IDP KV+R AL DAAS++ L+ TTEA++ E PK+ Sbjct: 290 EDIAILTGGTVISEELGIKLENTTMDTLGRAKRIMVDKETTTIVDGAGSKEDIGGRVAQIKAQIEDTTSDYDREKLQERLAKLAGGVAVIRVGGSTEVEVKEKKDRVDDALHATRAAVEEGILPGGGVALLRVVSALNGLATANDDQRVGIEIVRRAIEAPVRQIAENAGAEGSIIVGKLREKQDFAFGWNAQTGEFGDLFQMGVIDPAKVVRAALQDAASIAGLLVTTEAMIAEKPKK 528 The following BLAST results are available for this feature:
BLAST of DC900313 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900313 ID=DC900313; Name=DC900313; organism=Citrus sinensis; type=EST; length=1041bpback to top |