DC900313
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH602_MESSB (60 kDa chaperonin 2 OS=Mesorhizobium sp. (strain BNC1) GN=groL2 PE=3 SV=1) HSP 1 Score: 241.506 bits (615), Expect = 6.079e-63 Identity = 120/239 (50.21%), Postives = 169/239 (70.71%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKE 718 QD+A+LTGG I+E+LG+ LE V L+MLG KKV I K++T I+DGAG K I+ R QI++ IE +TSDYD+EKLQERLAKL+GGVAV+++GGA+E EV E+KDRV DA++AT+AAVEEG++PGGGV + N DQK+G+ I++ A++ P+ I ++ E+ + G++A GEY D+ + G+IDP+KV+R AL DAASV+ L+ TTEA+V + PK+ Sbjct: 290 QDIAILTGGTAISEDLGIKLENVTLEMLGRAKKVVIEKENTTIVDGAGSKDEIQGRVNQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDAMHATRAAVEEGLLPGGGVALLRAAKALDNVTGENEDQKVGISIVRRAIEAPIRQIAENAGAEGSIIVGRVREKPDFGYGWNAQTGEYGDLYQMGVIDPVKVVRAALQDAASVAGLLITTEAMVADRPKK 528
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH601_ROSDO (60 kDa chaperonin 1 OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=groL1 PE=3 SV=1) HSP 1 Score: 241.506 bits (615), Expect = 6.079e-63 Identity = 123/237 (51.90%), Postives = 164/237 (69.20%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELP 712 QD+A+LTGG +I+E+LGM LE V +DMLGT KKV I+KD+T +++GAG+K I+ R QIR+ IE +TSDYD+EKLQER+AKL+GGVAV+++GG +E EV E+KDRV DALNAT+AAV+EGIV GGGV AN DQ G+ I++ AL+ P+ I K+ E D+ G++A EY D+ G+IDP KV+RTAL DA+SV+ L+ TTEA+V P Sbjct: 290 QDIAILTGGQVISEDLGMKLESVTIDMLGTAKKVAITKDETTVVNGAGEKAEIDARVSQIRTQIEETTSDYDREKLQERVAKLAGGVAVIRVGGMTEVEVKERKDRVDDALNATRAAVQEGIVVGGGVALVQGAKALDGLQGANPDQNAGIAIVRRALEAPLRQIAENAGVDGSVVAGKIRESDDATFGFNAQTEEYGDLFSFGVIDPAKVVRTALEDASSVAGLLITTEAMVAVKP 526
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_TRYCR (Chaperonin HSP60, mitochondrial OS=Trypanosoma cruzi GN=HSP60 PE=2 SV=1) HSP 1 Score: 241.121 bits (614), Expect = 7.940e-63 Identity = 128/249 (51.41%), Postives = 170/249 (68.27%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEE-LGMDLEKVNLD--MLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGV---XXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEA 730 QD+A+ G L+ EE G++L+ N D +LGT KK TI+KDDTV+L+G G+ ++ER E +R I+ TSDY++EKLQERLAKLSGGVAV+K+GG SE EV EKKDR+TDAL +T+AAV+EGIVPGGGV S+ DQ+ GVQII+NA++ P HTI K+LE ++ +GYDA + YV+M ++GIIDP +V+R A+ DA SV+SLM T EA +V+LPKE A Sbjct: 297 QDIAIFAGARLVGEEGSGLELDAENFDPAILGTVKKATITKDDTVLLNGGGESSMVKERVELLRGLIDGETSDYNREKLQERLAKLSGGVAVIKVGGGSEVEVNEKKDRITDALCSTRAAVQEGIVPGGGVALLRASKALDSLLGDSSLTADQRTGVQIIRNAVRLPAHTIVLNAGKEGAVVVEKVLENNDVTVGYDAQRDRYVNMFEAGIIDPARVVRVAITDAVSVASLMMTAEAAIVDLPKEETPA 545
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_SPHWW (60 kDa chaperonin OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=groL PE=3 SV=1) HSP 1 Score: 241.121 bits (614), Expect = 7.940e-63 Identity = 127/243 (52.26%), Postives = 167/243 (68.72%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEA 730 +D+A+LT G+LI+E+LG+ LE V + MLGT K+VTI KD+T I+DGAG +I+ R E IR IE +TSDYD+EKLQERLAKL+GGVAV+K+GGA+E EV E+KDRV DAL+AT+AAVEEGIVPGGG AN DQ G+ II+ A+ PV I LL +++ G++AA Y ++V +G+IDP KV+RTAL DAASV+ L+ TTEA + ELP++ A Sbjct: 290 EDIAILTNGELISEDLGIKLENVTIGMLGTAKRVTIDKDNTTIVDGAGAADAIKGRVEAIRKQIEITTSDYDREKLQERLAKLAGGVAVIKVGGATEVEVKERKDRVDDALHATRAAVEEGIVPGGGTALLYATKALDGLKGANDDQTRGIDIIRRAISAPVKQIAQNAGQDGAVVAGNLLRENDETKGFNAATDVYENLVAAGVIDPTKVVRTALQDAASVAGLLITTEATIAELPEDKAPA 532
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_HYPNA (60 kDa chaperonin OS=Hyphomonas neptunium (strain ATCC 15444) GN=groL PE=3 SV=1) HSP 1 Score: 241.121 bits (614), Expect = 7.940e-63 Identity = 125/239 (52.30%), Postives = 167/239 (69.87%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKE 718 QDLAVLTGG +I+E+LG+ LE V ++MLG K+V+I KD+T I+DG G KK IE R QIR I++++SDYD+EKLQERLAKL+GGVAV+K+GGA+E EV E+KDRV DALNAT+AAVEEGIVPGGGV N D+K G+ I++ AL+ P+ I +L + G++A EY D+V G+IDP+KV+R+AL +AAS++SL+ TTEA + E PK+ Sbjct: 290 QDLAVLTGGQVISEDLGIKLENVGMEMLGKAKRVSIDKDNTTIVDGGGKKKEIEARVSQIRKQIDDTSSDYDREKLQERLAKLAGGVAVIKVGGATEVEVKERKDRVDDALNATRAAVEEGIVPGGGVALLRSSKNIDVVG-LNDDEKAGIDIVRKALEAPIRQIAENAGVEGSVVVNTILNNKSRSYGFNAQTEEYGDLVAMGVIDPVKVVRSALQNAASIASLLITTEAGIAEAPKK 527
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_AQUAE (60 kDa chaperonin OS=Aquifex aeolicus GN=groL PE=3 SV=1) HSP 1 Score: 241.121 bits (614), Expect = 7.940e-63 Identity = 125/244 (51.23%), Postives = 169/244 (69.26%), Query Frame = 2 Query: 5 DLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLE---QDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKE 727 D+AVLTGG ITE+LG+ LE V LDMLG +KV + K+ T I+ G GD + I+ R EQI+ I+ +TSDYD+EKLQERLAKLSGGVA++++G A+EAE+ EKK RV DA++ATKAAVEEGIVPGGGV N DQ++G+ II+ A++TP+ I K++E + G++AA GEYVDM ++GIIDP KV+RTA+ +AASV+ M T EA++ +LP+E K+ Sbjct: 291 DIAVLTGGQAITEDLGIKLESVTLDMLGQAEKVVVDKEHTTIIGGKGDPEQIKARIEQIKRQIQETTSDYDREKLQERLAKLSGGVAIIRVGAATEAELKEKKYRVEDAVHATKAAVEEGIVPGGGVALVRASEALEDLKGDNHDQQLGIDIIKKAVRTPLKQIAYNAGYDGSVVLEKVIELGKEKGVSWGFNAATGEYVDMYEAGIIDPTKVVRTAIENAASVAGTMLTAEALIADLPEEKKK 534
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_ALTMD (60 kDa chaperonin OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=groL PE=3 SV=1) HSP 1 Score: 241.121 bits (614), Expect = 7.940e-63 Identity = 125/239 (52.30%), Postives = 170/239 (71.13%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKE 718 QD+A+LTGG +I+EE+G++LEKV L+ LGT K+V I+KD+T ++DG GD+++IE RC QI+ IE S+SDYDKEKLQERLAKLSGGVAV+K+G A+E E+ EKKDRV DAL+AT+AAVEEG+VPGGGV + N DQ +GV++ A++ P+ I ++ D + GY+A Y DM++ GI+DP KV R+AL A+S++SLM TTEA+V ELPK+ Sbjct: 290 QDIAILTGGTVISEEIGLELEKVQLEDLGTAKRVVINKDNTTVVDGNGDQEAIEGRCAQIKGQIEESSSDYDKEKLQERLAKLSGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVPGGGVALVRAAAKLSELTGDNEDQTVGVKLALRAMEAPLRQISINSGAEASVVVNEVKNGDG-NYGYNAGNDTYGDMLEMGILDPTKVTRSALQFASSIASLMITTEAMVAELPKD 527
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH603_BURCM (60 kDa chaperonin 3 OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=groL3 PE=3 SV=1) HSP 1 Score: 240.736 bits (613), Expect = 1.037e-62 Identity = 123/243 (50.62%), Postives = 171/243 (70.37%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEA 730 +D+A+LTG +I+EE G L+K +L+ LG+ K+V + K+DT+I+DGAGD++ IE R + IR+ I+ +TSDYD+EKLQER+AKL+GGVAV+K+G A+E E+ EKKDRV DAL+AT+AAVEEGIVPGGGV AN DQ G+QI+ AL+ P+ I K+LE + GY+AA GEY D+V++G++DP KV RTAL +AAS++ L+ TT+A V + PK+ K A Sbjct: 290 EDIAILTGATVISEETGKQLQKASLEDLGSAKRVEVRKEDTIIIDGAGDQERIEARVKSIRTQIDETTSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVDDALHATRAAVEEGIVPGGGVALLRARSTATSLKGANSDQDAGIQIVLRALEAPLRVIASNAGDEPSVVIAKVLE-GKGNFGYNAATGEYGDLVEAGVVDPTKVTRTALQNAASIAGLILTTDATVADAPKDEKPA 531
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH601_METCA (60 kDa chaperonin 1 OS=Methylococcus capsulatus GN=groL1 PE=3 SV=1) HSP 1 Score: 240.736 bits (613), Expect = 1.037e-62 Identity = 132/244 (54.10%), Postives = 170/244 (69.67%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEAP 733 +D+AVLTGG +I+E++G+ LEK L LGT KKV I+K++T I+DGAG ++I+ R QIR IE++TSDYD+EKLQERLAKL+GGVAV+K+G A+E E+ EKK RV DAL+AT+AAVEEGIVPGGGV AN DQ +G+ I + A++ P+ I K+ E + GY+AA GEY DMV GI+DP KV R+AL +AASV+SLM TTEA+V E PKE EAP Sbjct: 290 EDIAVLTGGTVISEDIGLSLEKATLADLGTAKKVQITKENTTIIDGAGSSEAIQGRVAQIRKQIEDTTSDYDREKLQERLAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVPGGGVALIRALAKLRDLKGANHDQDVGISIARRAMEEPLRQIVANAGDEPSVVLNKVAEGAG-NFGYNAATGEYGDMVAMGILDPAKVTRSALQNAASVASLMITTEAMVAEEPKE--EAP 530
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH603_RHILE (60 kDa chaperonin 3 OS=Rhizobium leguminosarum GN=groL3 PE=3 SV=1) HSP 1 Score: 240.35 bits (612), Expect = 1.354e-62 Identity = 119/237 (50.21%), Postives = 165/237 (69.62%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELP 712 +D+AVLT G +I+E+LG+ L+ V LDMLG K+V I K+ T I+DG+G+K +I+ R +QI++ IE +TSDYDKEKLQERLAKL+GGVAV+++GGA+E EV EKKDR+ DALNAT+AAVEEGIVPGGGV + N D G+ I+ AL+ P+ I KL +N + G+DA YVDM+++GI+DP KV+RTAL DA S+++L+ T E ++ ++P Sbjct: 290 EDIAVLTSGQMISEDLGIKLDNVTLDMLGHAKRVLIDKESTTIIDGSGEKAAIQARIQQIKAQIEETTSDYDKEKLQERLAKLAGGVAVIRVGGATETEVKEKKDRIDDALNATRAAVEEGIVPGGGVALLRAKSALTGLTGENADVTAGISIVLRALEAPIRQIADNAGFEGSIVVGKLAGSNNHNQGFDAQTETYVDMIEAGIVDPAKVVRTALQDAGSIAALLITAEVMIADIP 526 The following BLAST results are available for this feature:
BLAST of DC900313 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900313 ID=DC900313; Name=DC900313; organism=Citrus sinensis; type=EST; length=1041bpback to top |