DC900313
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_MOUSE (60 kDa heat shock protein, mitochondrial OS=Mus musculus GN=Hspd1 PE=1 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 6.721e-62 Identity = 128/243 (52.67%), Postives = 169/243 (69.55%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEE-LGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKE 727 +D+A+ TGG + EE L ++LE V LG +V ++KDD ++L G GDK IE+R ++I ++ +TS+Y+KEKL ERLAKLS GVAVLK+GG S+ EV EKKDRVTDALNAT+AAVEEGIV GGG AN DQKIG++II+ ALK P TI K+L Q ++++GYDA G++V+MV+ GIIDP KV+RTAL+DAA V+SL+TT EA+V E+PKE K+ Sbjct: 314 KDMAIATGGAVFGEEGLNLNLEDVQAHDLGKVGEVIVTKDDAMLLKGKGDKAHIEKRIQEITEQLDITTSEYEKEKLNERLAKLSDGVAVLKVGGTSDVEVNEKKDRVTDALNATRAAVEEGIVLGGGCALLRCIPALDSLKPANEDQKIGIEIIKRALKIPAMTIAKNAGVEGSLIVEKIL-QSSSEVGYDAMLGDFVNMVEKGIIDPTKVVRTALLDAAGVASLLTTAEAVVTEIPKEEKD 555
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_EUGGR (Chaperonin CPN60, mitochondrial OS=Euglena gracilis GN=HSP60 PE=2 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 6.721e-62 Identity = 127/240 (52.92%), Postives = 167/240 (69.58%), Query Frame = 2 Query: 5 DLAVLTGGDLITEELGMDLEK-VNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXS---TANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELP 712 D+A+ TGG++ EELGM+LE+ + +LG KKV++ KD T+IL+GAGD K++EER E I+ + + S Y+KEKL ERLAKLSGGVAV+K+GGAS+ EVGEKKDRVTDALNAT+AAV EGIVPGGG + T DQK GV+I+ +A+K P TI +LL + GYDA +G+YV+M ++GIIDP KV++TALVDAASV+ LM TTEA + ++P Sbjct: 304 DVAIFTGGEVYNEELGMNLEQHFDHRILGFAKKVSVGKDQTIILNGAGDPKAVEERKELIQGMLGKTDSSYEKEKLNERLAKLSGGVAVIKVGGASDVEVGEKKDRVTDALNATRAAVSEGIVPGGGAALLYASSALAELAADPTLTEDQKTGVRIVMSAIKLPAITIVKNAGGEGAVVIHQLLAEKKMQQGYDAQQGKYVNMFEAGIIDPAKVVKTALVDAASVAGLMITTEAAITDIP 543
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_CHICK (60 kDa heat shock protein, mitochondrial OS=Gallus gallus GN=HSPD1 PE=1 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 6.721e-62 Identity = 127/243 (52.26%), Postives = 169/243 (69.55%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEE-LGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKE 727 +D+A+ TGG + EE L +++E + G +V ++KDDT++L G G+K IE+R ++I +E +TS+Y+KEKL ERLAKLS GVAVLK+GG S+ EV EKKDRVTDALNAT+AAVEEGIVPGGG AN DQKIG++II+ LK P TI K+L Q ++++GYDA GE+V+MV+ GIIDP KV+RTAL+DAA V+SL++T EA+V E+PKE KE Sbjct: 314 KDMAIATGGAVFGEEGLSLNVEDIQPHDFGKVGEVIVTKDDTMLLKGKGEKAQIEKRIQEIIEQLEVTTSEYEKEKLNERLAKLSDGVAVLKVGGTSDVEVNEKKDRVTDALNATRAAVEEGIVPGGGCALLRCIPALDALKPANEDQKIGIEIIKRTLKIPAMTIAKNAGVEGSLIVEKIL-QSSSEVGYDAMLGEFVNMVEKGIIDPTKVVRTALMDAAGVASLLSTAEAVVTEVPKEEKE 555
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH602_BURP6 (60 kDa chaperonin 2 OS=Burkholderia pseudomallei (strain 668) GN=groL2 PE=3 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 6.721e-62 Identity = 123/239 (51.46%), Postives = 166/239 (69.46%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKE 718 +D+A+LTGG +ITEE G+ LEK L LG K++ + K++T ++DGAGDK +I+ R +QIR+ I +TSDYD+EKLQER+AKL+GGVAV+K+GGA+E EV EKKDRV DAL+AT+AAVEEGIVPGGGV + AN DQK G+ I+ AL+ P+ I + + GY+AA GEY D+V+SG++DP KV RTAL +AAS++ L+ TT+A V E PK+ Sbjct: 290 EDIAILTGGQVITEETGLTLEKATLQELGRAKRIEVGKENTTLIDGAGDKPNIDARVKQIRAQIAEATSDYDREKLQERVAKLAGGVAVIKVGGATEVEVKEKKDRVDDALHATRAAVEEGIVPGGGVALIRVKQAIAALAGANADQKAGISIVLRALEEPLRQIVANAGEEASVVVATVAAGQG-NYGYNAATGEYGDLVESGVLDPTKVTRTALQNAASIAGLLLTTDATVHEAPKD 527
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH602_BURCM (60 kDa chaperonin 2 OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=groL2 PE=3 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 6.721e-62 Identity = 124/243 (51.03%), Postives = 167/243 (68.72%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEA 730 +D+A+LTGG ++ EE G+ LEK L LG K++ + K++T ++DGAGD K+IE R +QIR I+ +TSDYD+EKLQER+AKL+GGVAV+K+GGA+E EV EKKDRV DAL+AT+AAVEEGIVPGGGV AN DQ G++I+ AL+ P+ I K+ E + + GY+A GEY D+V+SG++DP KV RTAL +AASV+ L+ TT+A V E PK+ A Sbjct: 290 EDIAILTGGQVVAEETGLALEKATLAELGQAKRIEVGKENTTVIDGAGDAKNIEARVKQIRVQIDEATSDYDREKLQERVAKLAGGVAVIKVGGATEIEVKEKKDRVDDALHATRAAVEEGIVPGGGVALIRVRQAIRELKGANADQDAGIKIVLRALEEPLRQIVTNAGEEASVVVAKVAE-GSGNFGYNAQTGEYGDLVESGVLDPTKVTRTALQNAASVAGLLLTTDATVFEAPKDAAPA 531
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_NITOC (60 kDa chaperonin OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=groL PE=3 SV=1) HSP 1 Score: 237.654 bits (605), Expect = 8.778e-62 Identity = 123/244 (50.41%), Postives = 169/244 (69.26%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEAP 733 +D+AVLTGG +I+EE+G+ L+KV LD LG KK+T++K++T I+DGAG I+ R EQ+R IE +TSDYDKEKLQER+AKL+GGVAV+K+G A+E E+ EKK RV DAL+AT+AAVEEG+VPGGGV AN DQ +G+ I + A++ P+ I + ++ + GY+AA GE+ DM+ GI+DP KV RTAL +AASV+ LM TTEA++ E PK+ + +P Sbjct: 290 EDIAVLTGGTVISEEVGLSLDKVTLDDLGRAKKITVNKENTTIVDGAGSADDIKARVEQVRIQIEEATSDYDKEKLQERVAKLAGGVAVIKVGAATEMEMKEKKARVEDALHATRAAVEEGVVPGGGVALIRALLGIKDLKGANHDQDVGINIARRAMEEPLRQIVNNSGEEASVIVNQ-IKGGEGNYGYNAATGEFGDMIAMGILDPTKVSRTALQNAASVAGLMITTEAMIAEAPKDEEASP 532
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_CRIGR (60 kDa heat shock protein, mitochondrial OS=Cricetulus griseus GN=HSPD1 PE=2 SV=1) HSP 1 Score: 237.269 bits (604), Expect = 1.146e-61 Identity = 127/243 (52.26%), Postives = 169/243 (69.55%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEE-LGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKE 727 +D+A+ TGG + EE L ++LE V LG +V ++KDD ++L G G+K IE+R ++I +E +TS+Y+KEKL ERLAKLS GVAVLK+GG S+ EV EKKDRVTDALNAT+AAVEEGIV GGG +N DQKIG++II+ ALK P TI K+L Q ++++GYDA G++V+MV+ GIIDP KV+RTAL+DAA V+SL+TT EA+V E+PKE K+ Sbjct: 314 KDMAIATGGAVFGEEGLNLNLEDVQAHDLGKVGEVIVTKDDAMLLKGKGEKAQIEKRIQEITEQLEITTSEYEKEKLNERLAKLSDGVAVLKVGGTSDVEVNEKKDRVTDALNATRAAVEEGIVLGGGCALLRCIPALDSLKPSNEDQKIGIEIIKRALKIPAMTIAKNAGVEGSLIVEKIL-QSSSEIGYDAMLGDFVNMVEKGIIDPTKVVRTALLDAAGVASLLTTAEAVVTEIPKEEKD 555
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH605_BURXL (60 kDa chaperonin 5 OS=Burkholderia xenovorans (strain LB400) GN=groL5 PE=3 SV=1) HSP 1 Score: 237.269 bits (604), Expect = 1.146e-61 Identity = 123/243 (50.62%), Postives = 169/243 (69.55%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEA 730 +D+A+LTGG +I EE G+ LEK L LG K++ + K++T ++DGAG+ K+IE R +QIR+ I+ ++SDYD+EKLQER+AKL+GGVAV+K+GGA+E EV EKKDRV DAL+AT+AAVEEGIVPGGGV AN DQ G++I+ AL+ P+ I K+ E + + GY+A GEY D+V+SG++DP KV RTAL +AASV++L+ TT+A V E PK+ A Sbjct: 290 EDIAILTGGQVIAEETGLTLEKATLAELGQAKRIEVGKENTTVIDGAGEHKNIEARVKQIRAQIDEASSDYDREKLQERVAKLAGGVAVIKVGGATEIEVKEKKDRVDDALHATRAAVEEGIVPGGGVALIRVRNAISGLKGANADQDAGIKIVLRALEEPLRQIVTNAGEEASVVVAKVAE-GSGNFGYNAQTGEYGDLVESGVLDPTKVTRTALQNAASVAALLLTTDATVYEAPKDPAPA 531
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH602_BURTA (60 kDa chaperonin 2 OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=groL2 PE=3 SV=1) HSP 1 Score: 237.269 bits (604), Expect = 1.146e-61 Identity = 123/243 (50.62%), Postives = 168/243 (69.14%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEA 730 +D+A+LTGG +I EE G+ LEK L LG K++ + K++T ++DGAGDK +I+ R +QIR+ I ++TSDYD+EKLQER+AKL+GGVAV+K+GGA+E EV EKKDRV DAL+AT+AAVEEGIVPGGGV + AN DQK G+ I+ AL+ P+ I + + + GY+AA GEY D+V+SG++DP KV RTAL +AAS++ L+ TT+A V E PK+ A Sbjct: 290 EDIAILTGGQVIAEETGLTLEKATLQELGRAKRIEVGKENTTLIDGAGDKPNIDARVKQIRAQIADATSDYDREKLQERVAKLAGGVAVIKVGGATEVEVKEKKDRVDDALHATRAAVEEGIVPGGGVALIRVKQAIAELTGANVDQKAGINIVLRALEEPLRQI-VANAGEEASVVVATVAAGSGNYGYNAATGEYGDLVESGVLDPTKVTRTALQNAASIAGLLLTTDATVHEAPKDAPPA 531
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH602_ANADF (60 kDa chaperonin 2 OS=Anaeromyxobacter sp. (strain Fw109-5) GN=groL2 PE=3 SV=1) HSP 1 Score: 237.269 bits (604), Expect = 1.146e-61 Identity = 126/244 (51.64%), Postives = 168/244 (68.85%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEAP 733 +D+A+LTGG +I EELG+ LE+V+L LG K+++I KD+T I+DGAG K IE R + IR+ IE +TSDYD+EKLQERLAKL GGVAV+ +G A+E E+ EKK RV DAL+AT+AAVEEGIVPGGGV + +K G+ I++ AL+ P+ I K+ E +T+ G++AA G+Y D+VKSG+IDP KV R+AL +A+SV+SLM TT A+V E PKE AP Sbjct: 290 EDIAILTGGRMIAEELGLKLEQVSLKDLGRAKRISIDKDNTTIVDGAGQKADIEARVKTIRAQIEETTSDYDREKLQERLAKLVGGVAVINVGAATETEMKEKKARVEDALHATRAAVEEGIVPGGGVAYLRAVKALEGVKVSE-GEKFGLDIVRRALEEPLRQIAGNGGYEASIVVNKVKESKDTNFGFNAATGDYEDLVKSGVIDPTKVSRSALQNASSVASLMLTTMALVAEKPKEESAAP 532 The following BLAST results are available for this feature:
BLAST of DC900313 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900313 ID=DC900313; Name=DC900313; organism=Citrus sinensis; type=EST; length=1041bpback to top |