DC900313
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_PELTS (60 kDa chaperonin OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=groL PE=3 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 1.004e-57 Identity = 112/242 (46.28%), Postives = 164/242 (67.77%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKE 727 QD+A+LTGG +ITEE+G+ L+K +D LG KV + K++T+I+ GAG I +R QI+ IE +TS++DKEKLQERLAKL+GGVAV+++G A+E E+ +KK R+ DALNAT+AAVEEGIVPGGGV + D+K G+ I++ AL+ P+ I K+ D +G++A GE+V+M+ +GI+DP KV RTAL +AAS+++++ TTE +V E P++ K+ Sbjct: 289 QDIAILTGGTVITEEVGLKLDKATIDQLGRANKVRVKKEETIIVGGAGSTDEITKRVAQIKKQIEETTSEFDKEKLQERLAKLAGGVAVIQVGAATETEMKDKKLRIEDALNATRAAVEEGIVPGGGVAYISALKGLDGLDAGSLDEKTGIDIVRRALEEPLRQIASNAGLEGSVIVEKVKNAD-PGIGFNALTGEFVNMIDAGIVDPAKVTRTALQNAASIAAMILTTETLVAEKPEKEKD 529
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_LACPL (60 kDa chaperonin OS=Lactobacillus plantarum GN=groL PE=3 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 1.004e-57 Identity = 119/243 (48.97%), Postives = 165/243 (67.90%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEA 730 QD+A+LTGG +IT++LG++L+ +D LG KVT++KD+T I++GAG K +I ER E IR+ I +TSD+DKEKLQERLAKL+GGVAV+++G A+E E+ E+K R+ DALNAT+AAVEEG V GGG D + G+ I++ AL+ PV I K+ EQ +G++AA E+VDM+K+GI+DP KV R+AL +AASVS+L+ TTEA+V E P+E A Sbjct: 288 QDIAILTGGTVITDDLGLELKDTTIDQLGQANKVTVTKDNTTIVEGAGSKDAISERVEFIRNQIGETTSDFDKEKLQERLAKLAGGVAVVRVGAATETELKERKYRIEDALNATRAAVEEGFVAGGGTALINVIKDVAALKETG-DVQTGINIVKRALEEPVRQIAENAGLEGSVIVEKMKEQ-KPGVGFNAATDEWVDMIKAGIVDPTKVTRSALQNAASVSALLLTTEAVVAEKPEENAPA 528
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_DESVV (60 kDa chaperonin OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=groL PE=3 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 1.004e-57 Identity = 119/244 (48.77%), Postives = 162/244 (66.39%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEAP 733 QD+AVLTGG +++E++G+ LE +++ LGT K+V I K++T I+DGAG I+ R +QIR+ IE +TSDYD+EKLQERLAKL GGVAV+ +G A+E E+ EKKDRV DALNAT+AAVEEGIVPGGG A+ D+ GV II+ A++ P+ I ++ E G++AA GEY D++ G+IDP KV R AL +AASV+SL+ TTE + E P+ K+ P Sbjct: 290 QDIAVLTGGQVVSEDMGIKLENISVADLGTAKRVVIDKENTTIVDGAGKGDDIKARVKQIRAQIEETTSDYDREKLQERLAKLVGGVAVIHVGAATETEMKEKKDRVEDALNATRAAVEEGIVPGGGTALVRVAKVLDDIKPADDDETAGVNIIRRAIEEPLRQIASNAGFEGSIVVERVRE-GKDGFGFNAATGEYEDLIGVGVIDPKKVTRIALQNAASVASLLLTTECAIAEKPEPKKDMP 532
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_DESVH (60 kDa chaperonin OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=groL PE=3 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 1.004e-57 Identity = 119/244 (48.77%), Postives = 162/244 (66.39%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEAP 733 QD+AVLTGG +++E++G+ LE +++ LGT K+V I K++T I+DGAG I+ R +QIR+ IE +TSDYD+EKLQERLAKL GGVAV+ +G A+E E+ EKKDRV DALNAT+AAVEEGIVPGGG A+ D+ GV II+ A++ P+ I ++ E G++AA GEY D++ G+IDP KV R AL +AASV+SL+ TTE + E P+ K+ P Sbjct: 290 QDIAVLTGGQVVSEDMGIKLENISVADLGTAKRVVIDKENTTIVDGAGKGDDIKARVKQIRAQIEETTSDYDREKLQERLAKLVGGVAVIHVGAATETEMKEKKDRVEDALNATRAAVEEGIVPGGGTALVRVAKVLDDIKPADDDETAGVNIIRRAIEEPLRQIASNAGFEGSIVVERVRE-GKDGFGFNAATGEYEDLIGVGVIDPKKVTRIALQNAASVASLLLTTECAIAEKPEPKKDMP 532
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_BUCAT (60 kDa chaperonin OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain Tuc7) GN=groL PE=3 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 1.004e-57 Identity = 121/243 (49.79%), Postives = 159/243 (65.43%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEA 730 QD+++LTGG +I+EEL M+LEK L+ LG K+V ISKD T I+ G G+K SI+ R QIR I+ +TSDYDKEKL ERLAKLSGGVAVLK+G A+E E+ EKK RV DAL+AT+AAVEEG+V GGGV N DQ +G+++ A++ P+ I ++ + GY+AA +Y DM+ GI+DP KV R+AL AASV+ LM TTE +V +LPKE K + Sbjct: 290 QDISILTGGSVISEELAMELEKSTLEDLGQAKRVVISKDTTTIIGGVGEKHSIQSRISQIRQEIQEATSDYDKEKLNERLAKLSGGVAVLKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALVRVAGKIADLRGQNEDQNVGIRVALRAMEAPLRQIVSNSGEEPSVVTNN-VKDGKGNYGYNAATDKYGDMIDFGILDPTKVTRSALQYAASVAGLMITTECMVTDLPKEDKSS 531
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH602_PSYIN (60 kDa chaperonin 2 OS=Psychromonas ingrahamii (strain 37) GN=groL2 PE=3 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 1.004e-57 Identity = 117/237 (49.37%), Postives = 159/237 (67.09%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELP 712 QD+A LTGG +I+EE+G+D+EKV L+ LG K++ I+KD+T I+DG GD+ I R QI+ IE STSDYDKEKLQER AKL+GGVAV+K+G ++E E+ EKKDRV DAL+AT+AAVEEG+V GGGV + N DQ +G+++ A++ P+ I + Q + GY+A GEY DM++ GIIDP KV R+AL AASV++LM TTE ++ + P Sbjct: 289 QDIATLTGGTVISEEIGLDMEKVQLEDLGQAKRIVINKDETTIIDGIGDESVINARVSQIKQQIEASTSDYDKEKLQERSAKLAGGVAVIKVGASTEVEMKEKKDRVDDALHATRAAVEEGVVAGGGVALVRVAAILKGLTGENEDQNVGIRVALRAMEAPLRQIVENCGEEASVVANN-VRQGEGNYGYNATTGEYGDMLEMGIIDPTKVARSALQFAASVAALMITTECMITDRP 524
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_CLOTE (60 kDa chaperonin OS=Clostridium tetani GN=groL PE=3 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 1.312e-57 Identity = 113/239 (47.28%), Postives = 164/239 (68.62%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKE 718 +D+A LTGG +I+EE+G DL+ V +DMLG + V I+K+ T I++G G+KK IE+R QI++ IE +TS++D+EKLQERLAKL+GGVAV+K+G A+E E+ E+K R+ DAL ATKAAVEEGI+PGGG ++ D K+G+ I++ +L+ PV I K ++ +GYDA EYV+M+K+GI+DP KV R+AL +AASV+S TTEA + ++P++ Sbjct: 290 EDIATLTGGQVISEEIGRDLKDVTVDMLGRAESVKITKETTTIVNGKGNKKEIEDRVNQIKAQIEETTSEFDREKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALAATKAAVEEGIIPGGGTAYAMVIKEVEKLNSETHDIKLGIDIVKKSLEEPVRQIACNAGVEGSIVIEK-VKHSEAGIGYDALNNEYVNMIKAGIVDPTKVSRSALQNAASVASTFLTTEAAIADIPEK 527
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_CLOB8 (60 kDa chaperonin OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=groL PE=3 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 1.312e-57 Identity = 121/244 (49.59%), Postives = 163/244 (66.80%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEAP 733 QD+A LTGG +I EELG +L+ V +DMLGT V +SK++TVI++G GD +I+ER QI++ IE ++S++DKEKLQERLAKL+GGVAV+K+G A+E E+ EKK R+ DAL ATKAAVEEGIV GGG ++ D +IG+ II +L+ PV I K ++ +GYDA GEY++M+K GI+DP KV R+AL +AASV+S TTEA V ++P KE P Sbjct: 288 QDIATLTGGTVIAEELGRELKDVTIDMLGTADSVKVSKENTVIVNGKGDSNAIKERINQIKAQIEETSSEFDKEKLQERLAKLAGGVAVIKVGAATETELKEKKLRIEDALAATKAAVEEGIVAGGGTAYVNVINEVAKLTSDVADTQIGINIIVKSLEEPVRQIATNAGVEGSVIIEK-VKNSEPGIGYDALHGEYINMIKGGIVDPTKVTRSALQNAASVASTFLTTEAAVADIP--AKETP 528
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_BUCAP (60 kDa chaperonin OS=Buchnera aphidicola subsp. Schizaphis graminum GN=groL PE=3 SV=3) HSP 1 Score: 223.787 bits (569), Expect = 1.312e-57 Identity = 120/243 (49.38%), Postives = 161/243 (66.26%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEA 730 QD+++LTGG +I+EEL MDLEK L+ LG K+V I+KD T I+ G+G+K++I+ R QIR I+ +TSDYDKEKL ERLAKLSGGVAVLK+G A+E E+ EKK RV DAL+AT+AAVEEG+V GGGV N DQ +G+++ A++ P+ I ++ + GY+AA EY DM+ GI+DP KV R+AL AASV+ LM TTE +V +LP+E K + Sbjct: 290 QDISILTGGSVISEELAMDLEKSTLEDLGQAKRVVINKDTTTIIGGSGEKQAIQSRIGQIRQEIQEATSDYDKEKLNERLAKLSGGVAVLKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALVRVAGKISNLRGHNEDQNVGIRVALRAMEAPLRQIVSNSGEEPSVVTNN-VKDGKGNYGYNAATDEYGDMIDFGILDPTKVTRSALQYAASVAGLMITTECMVTDLPREDKSS 531
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_ARCB4 (60 kDa chaperonin OS=Arcobacter butzleri (strain RM4018) GN=groL PE=3 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 1.312e-57 Identity = 121/243 (49.79%), Postives = 161/243 (66.26%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEA 730 +D+AVLTGG +I+EE+GM LE LGT K+ I KD+T I+DG GD + + R QI++ I N+TSDYD+EKLQERLAKLSGGVAV+K+G A+E E+ EKKDRV DAL+AT+AAVEEGIV GGG T D++IG I+ A+ P+ I ++ + N +LG++AA GEYVDM ++GI+DP KV R A+ +A SV+SL+ TTEA V ++ KE K A Sbjct: 289 EDIAVLTGGTVISEEMGMKLETAEFSCLGTASKIVIDKDNTTIVDGNGDNERVVARVNQIKAEISNTTSDYDREKLQERLAKLSGGVAVIKVGAATETEMKEKKDRVDDALSATRAAVEEGIVIGGGAALIKASKKVNLDLTG--DERIGADIVLRAISAPLKQIAINAGFDAGVVANEVEKSSNENLGFNAATGEYVDMFEAGIVDPAKVERVAMQNAVSVASLLLTTEATVSDI-KEDKPA 528 The following BLAST results are available for this feature:
BLAST of DC900313 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DC900313 ID=DC900313; Name=DC900313; organism=Citrus sinensis; type=EST; length=1041bpback to top |