DC900313
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_BARBA (60 kDa chaperonin OS=Bartonella bacilliformis GN=groL PE=1 SV=2) HSP 1 Score: 238.81 bits (608), Expect = 3.940e-62 Identity = 124/244 (50.82%), Postives = 168/244 (68.85%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEAP 733 +D+AVLT G +I+E++G+ LE V L+MLG KKV +SK+ T I+DGAG K I R QI++ IE +TSDYD+EKLQERLAKL+GGVAV+++GG++E EV EKKDRV DALNAT+AAVEEGIVPGGG N DQ+ G+ II+ AL+ P I K+LE + GY+ A ++ D++ GI+DP+KV+R+AL +AAS++SL+ TTEA+V E+PK+ AP Sbjct: 290 EDIAVLTSGQVISEDVGIKLENVTLEMLGRAKKVHVSKETTTIVDGAGQKSEINARVSQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGSTEVEVKEKKDRVDDALNATRAAVEEGIVPGGGTPLLRAAKALSIKG-KNPDQEAGIGIIRRALQAPARQIAHNAGEEAAVIVGKVLENCSDTFGYNTATAQFRDLISFGIVDPVKVVRSALQNAASIASLLITTEAMVAEVPKKEAAAP 532
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_METRJ (60 kDa chaperonin OS=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) GN=groL PE=3 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 5.146e-62 Identity = 123/245 (50.20%), Postives = 168/245 (68.57%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTD-LGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEAP 733 +D+A+LT G +I E+LG+ LE V L MLG K+V I K++T I+DG G+K IE R QI++ IE +TSDYD+EKLQERLAKL+GGVAV+++GGA+E EV EKKDRV DALNAT+AAVEEGIVPGGG + D + G++I+ AL+ P+ I K+ + +++ G++A EYVDM+++GI+DP KV+RTAL DAASV+ L+ TTEA+V + PK+ AP Sbjct: 290 EDIAILTKGQMIAEDLGIKLENVTLPMLGRAKRVRIEKENTTIIDGVGEKSDIEGRISQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRVDDALNATRAAVEEGIVPGGGTALLRAKKAVAELKSDIPDVQAGIKIVLKALEAPLRQIAQNAGVEGSIVVGKITDNTSSETFGFNAQTEEYVDMIQAGIVDPAKVVRTALQDAASVAGLLVTTEAMVADAPKKDSPAP 534
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_ACIBL (60 kDa chaperonin OS=Acidobacteria bacterium (strain Ellin345) GN=groL PE=3 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 5.146e-62 Identity = 125/244 (51.23%), Postives = 165/244 (67.62%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEAP 733 QD+A+LTGG ITE+LG+ LE V++D LG+ KKVTI KD+T I++G G IE R ++IRS +E +TSDYD+EKLQERLAKL GGVAV+K+G A+E E+ EKK RV DA++AT+AAVEEGIVPGGGV D+ IG II+ AL+ P+ I K+ + + GY+A EYVD+VK+G+IDP KV RTAL +A S++ LM TTEA++ E+P+E K P Sbjct: 299 QDIAILTGGKAITEDLGIKLENVHMDDLGSAKKVTIDKDNTTIVEGKGKSSDIEGRVKEIRSQVEKTTSDYDREKLQERLAKLVGGVAVIKVGAATETEMKEKKARVEDAMHATRAAVEEGIVPGGGVALIRCVEAVDALKLTG-DEGIGANIIKRALEEPLRQIVGNAGEEGAIVVGKIRDHKDPHYGYNAQTSEYVDLVKAGVIDPTKVTRTALQNAGSIAGLMLTTEALISEIPEEKKSEP 541
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH602_BURXL (60 kDa chaperonin 2 OS=Burkholderia xenovorans (strain LB400) GN=groL2 PE=3 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 5.146e-62 Identity = 123/244 (50.41%), Postives = 168/244 (68.85%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEAP 733 +D+A+LTG +I+EE G LEK L+ LG K+V + K++T+I+DGAGD+ I+ R + IR+ IE +TSDYD+EKLQER+AKL+GGVAV+K+G A+E E+ EKKDRV DAL+AT+AAVEEGIVPGGGV + AN DQ G++I+ AL+ P+ I K+L + GY+AA GEY D+V++G++DP KV RTAL +AAS++ L+ TT+A V E PKE K P Sbjct: 290 EDIAILTGATVISEETGKQLEKATLEELGRAKRVEVQKENTIIIDGAGDQTRIDARVKAIRAQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVDDALHATRAAVEEGIVPGGGVALLRARSAISSLTGANADQDAGIRIVLRALEAPLRVIAANAGDEPSVVVAKVL-SGKGNYGYNAATGEYGDLVETGVVDPTKVTRTALQNAASIAGLILTTDATVAEAPKEEKAVP 532
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH602_BURPS (60 kDa chaperonin 2 OS=Burkholderia pseudomallei GN=groL2 PE=3 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 5.146e-62 Identity = 124/243 (51.03%), Postives = 167/243 (68.72%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEA 730 +D+A+LTGG +ITEE G+ LEK L LG K++ + K++T ++DGAGDK +I+ R +QIR+ I +TSDYD+EKLQER+AKL+GGVAV+K+GGA+E EV EKKDRV DAL+AT+AAVEEGIVPGGGV + AN DQK G+ I+ AL+ P+ I + + GY+AA GEY D+V+SG++DP KV RTAL +AAS++ L+ TT+A V E PK+ A Sbjct: 290 EDIAILTGGQVITEETGLTLEKATLQELGRAKRIEVGKENTTLIDGAGDKPNIDARVKQIRAQIAEATSDYDREKLQERVAKLAGGVAVIKVGGATEVEVKEKKDRVDDALHATRAAVEEGIVPGGGVALIRVKQAIAALAGANADQKAGISIVLRALEEPLRQIVANAGEEASVVVATVAAGQG-NYGYNAATGEYGDLVESGVLDPTKVTRTALQNAASIAGLLLTTDATVHEAPKDAPPA 531
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH602_BURP1 (60 kDa chaperonin 2 OS=Burkholderia pseudomallei (strain 1710b) GN=groL2 PE=3 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 5.146e-62 Identity = 124/243 (51.03%), Postives = 167/243 (68.72%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEA 730 +D+A+LTGG +ITEE G+ LEK L LG K++ + K++T ++DGAGDK +I+ R +QIR+ I +TSDYD+EKLQER+AKL+GGVAV+K+GGA+E EV EKKDRV DAL+AT+AAVEEGIVPGGGV + AN DQK G+ I+ AL+ P+ I + + GY+AA GEY D+V+SG++DP KV RTAL +AAS++ L+ TT+A V E PK+ A Sbjct: 290 EDIAILTGGQVITEETGLTLEKATLQELGRAKRIEVGKENTTLIDGAGDKPNIDARVKQIRAQIAEATSDYDREKLQERVAKLAGGVAVIKVGGATEVEVKEKKDRVDDALHATRAAVEEGIVPGGGVALIRVKQAIAALAGANADQKAGISIVLRALEEPLRQIVANAGEEASVVVATVAAGQG-NYGYNAATGEYGDLVESGVLDPTKVTRTALQNAASIAGLLLTTDATVHEAPKDAPPA 531
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH602_BURP0 (60 kDa chaperonin 2 OS=Burkholderia pseudomallei (strain 1106a) GN=groL2 PE=3 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 5.146e-62 Identity = 124/239 (51.88%), Postives = 166/239 (69.46%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKE 718 +D+A+LTGG +ITEE G+ LEK L LG K+V + K++T ++DGAGDK +I+ R +QIR+ I +TSDYD+EKLQER+AKL+GGVAV+K+GGA+E EV EKKDRV DAL+AT+AAVEEGIVPGGGV + AN DQK G+ I+ AL+ P+ I + + GY+AA GEY D+V+SG++DP KV RTAL +AAS++ L+ TT+A V E PK+ Sbjct: 290 EDIAILTGGQVITEETGLTLEKATLQELGRAKRVEVGKENTTLIDGAGDKPNIDARVKQIRAQIAEATSDYDREKLQERVAKLAGGVAVIKVGGATEVEVKEKKDRVDDALHATRAAVEEGIVPGGGVALIRVKQAIAALAGANADQKAGISIVLRALEEPLRQIVANAGEEASVVVATVAAGQG-NYGYNAATGEYGDLVESGVLDPTKVTRTALQNAASIAGLLLTTDATVHEAPKD 527
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_UNCTG (60 kDa chaperonin OS=Uncultured termite group 1 bacterium phylotype Rs-D17 GN=groL PE=3 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 6.721e-62 Identity = 120/244 (49.18%), Postives = 164/244 (67.21%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEAP 733 QD+A+LTGG +ITEE G+ L+K +D+LG K++ + K++T I+ G GDKK IE R QIR IE++ SDYDKEKLQERLAKL GGVAV+ +G A+E E+ KK +V DALNAT+A VEEGIV GGGV + A+ D+K G++I+ AL+ P+ I K+ +T GYDA EYVDM+K+GI+DP KV RTAL +AAS++SL+ TTE +V ++P++ + P Sbjct: 288 QDIAILTGGTVITEETGLKLDKATIDLLGQAKRIVVDKENTTIVSGLGDKKEIEARIAQIRKQIEDTKSDYDKEKLQERLAKLVGGVAVVNVGAATEVEMKTKKFKVEDALNATRAGVEEGIVAGGGVALLKTQTVLEKINAADSDEKTGIEIVLKALEGPIRMIIENAGLEASVVVDKVKNSKDTAFGYDADNNEYVDMIKAGIVDPAKVTRTALENAASIASLILTTETLVTDIPEKSPKFP 531
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_RHOCA (60 kDa chaperonin OS=Rhodobacter capsulatus GN=groL PE=1 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 6.721e-62 Identity = 126/244 (51.64%), Postives = 164/244 (67.21%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEAP 733 QD+A+LTGG +I+++LGM LE V LDMLG KKVTISK++T I+DG GDK I R IR+ IE +TSDYD+EKLQER+AKL+GGVAV+++GG +E EV E+KDRV DALNAT+AAV+EGI+ GGGV + AN DQ G+ I++ AL+ P+ I K+ E + G++A EY DM G+IDP KV RTAL DAAS++ L+ TTE ++ E P E K AP Sbjct: 290 QDIAILTGGQVISDDLGMKLENVTLDMLGRAKKVTISKENTTIVDGHGDKAEINARVAHIRTQIEETTSDYDREKLQERVAKLAGGVAVIRVGGMTEVEVKERKDRVDDALNATRAAVQEGIIVGGGVALVQAAKKLNDLTGANSDQDAGISIVRRALEAPLRQIAENAGVDGAVVAGKVRESADPAFGFNAQTEEYGDMFGFGVIDPAKVTRTALEDAASIAGLLITTECMIAEKP-EPKAAP 532
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_RAT (60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus GN=Hspd1 PE=1 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 6.721e-62 Identity = 128/243 (52.67%), Postives = 169/243 (69.55%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEE-LGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKE 727 +D+A+ TGG + EE L ++LE V LG +V ++KDD ++L G GDK IE+R ++I ++ +TS+Y+KEKL ERLAKLS GVAVLK+GG S+ EV EKKDRVTDALNAT+AAVEEGIV GGG AN DQKIG++II+ ALK P TI K+L Q ++++GYDA G++V+MV+ GIIDP KV+RTAL+DAA V+SL+TT EA+V E+PKE K+ Sbjct: 314 KDMAIATGGAVFGEEGLNLNLEDVQAHDLGKVGEVIVTKDDAMLLKGKGDKAHIEKRIQEITEQLDITTSEYEKEKLNERLAKLSDGVAVLKVGGTSDVEVNEKKDRVTDALNATRAAVEEGIVLGGGCALLRCIPALDSLKPANEDQKIGIEIIKRALKIPAMTIAKNAGVEGSLIVEKIL-QSSSEVGYDAMLGDFVNMVEKGIIDPTKVVRTALLDAAGVASLLTTAEAVVTEIPKEEKD 555 The following BLAST results are available for this feature:
BLAST of DC900313 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900313 ID=DC900313; Name=DC900313; organism=Citrus sinensis; type=EST; length=1041bpback to top |