DC900313
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_RHIL3 (60 kDa chaperonin OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=groL PE=3 SV=1) HSP 1 Score: 239.965 bits (611), Expect = 1.769e-62 Identity = 119/237 (50.21%), Postives = 166/237 (70.04%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELP 712 +D+AVLT G +I+E+LG+ LE V LDMLG K+V I K+ T I+DG+G+K +I+ R +QI++ IE++TSDYDKEKLQERLAKL+GGVAV+++GGA+E EV EKKDR+ DALNAT+AAVEEGIVPGGGV + N D G+ I+ AL+ P+ I KL ++ + G+DA YVDM+++GI+DP KV+RTAL DA S+++L+ T E ++ ++P Sbjct: 290 EDIAVLTAGQMISEDLGIKLENVTLDMLGHAKRVLIDKESTTIIDGSGEKAAIQARIQQIKAQIEDTTSDYDKEKLQERLAKLAGGVAVIRVGGATETEVKEKKDRIDDALNATRAAVEEGIVPGGGVALLRAKSALTGLTGENADVTAGISIVLRALEAPIRQIVDNAGFEGSIVVGKLAGSNDHNQGFDAQTETYVDMIEAGIVDPAKVVRTALQDAGSIAALLITAEVMIADIP 526
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_METSS (60 kDa chaperonin OS=Methylovorus sp. (strain SS1 / DSM 11726) GN=groL PE=3 SV=1) HSP 1 Score: 239.965 bits (611), Expect = 1.769e-62 Identity = 124/243 (51.03%), Postives = 172/243 (70.78%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEA 730 +D+A+LTG +I+EE G LEK +L+ LG K+V + K++T+I+DGAG++K+IE R + I++ I+ STSDYD+EKLQER+AKLSGGVAV+K+G A+E E+ EKKDRV DAL+AT+AAVEEGIVPGGGV N DQ G++I+ A++ P+ I K+L + + GY+AA GEY D+V++G++DP KV RTAL +AASV+SL+ TT+A + ELPKE K A Sbjct: 290 EDIAILTGATVISEETGKQLEKASLEDLGRAKRVELQKENTIIIDGAGEQKAIEARVKAIQAQIDESTSDYDREKLQERVAKLSGGVAVIKVGAATEVEMKEKKDRVDDALHATRAAVEEGIVPGGGVALLRARSRIVNLKGDNGDQDAGIRIVLRAIEAPLRAIAANAGDEPSVVINKVL-AGSGNFGYNAATGEYADLVETGVVDPTKVTRTALQNAASVASLILTTDASIAELPKEEKAA 531
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_GRAFK (60 kDa chaperonin OS=Gramella forsetii (strain KT0803) GN=groL PE=3 SV=1) HSP 1 Score: 239.965 bits (611), Expect = 1.769e-62 Identity = 125/239 (52.30%), Postives = 167/239 (69.87%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKE 718 +D+A+LTGG +I+EE G LE +DMLGT +KV I KD+T +++GAGD K+I+ER QI++ IE++TSDYD+EKLQERLAKL+GGVAVL +G ASE E+ EKKDRV DAL+AT+AAVEEGIV GGGV T N D+ GV+I+ A+++P+ TI K+LE D GYDA YVDM+K+GIIDP KV R AL +AASV+ ++ TTE + ++P++ Sbjct: 290 EDIAILTGGTVISEERGFSLENATIDMLGTAEKVAIDKDNTTVVNGAGDDKAIKERVNQIKAQIESTTSDYDREKLQERLAKLAGGVAVLYVGAASEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALIRAQVVLSKIKTENPDEATGVKIVSKAIESPLRTIVENAGGEGSVVINKVLE-GKKDFGYDAKTETYVDMLKAGIIDPKKVTRVALENAASVAGMILTTECALTDIPED 527
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_BARQU (60 kDa chaperonin OS=Bartonella quintana GN=groL PE=3 SV=1) HSP 1 Score: 239.965 bits (611), Expect = 1.769e-62 Identity = 124/244 (50.82%), Postives = 168/244 (68.85%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEAP 733 +D+A+LT G +I+E++G+ LE V LDMLG KKV ISK++T I+DGAG K I R QI+ IE +TSDYD+EKLQERLAKL+GGVAV+++GGA+E EV EKKDRV DALNAT+AAVEEGIV GGG +N DQ+ G+ I++ AL+ P I K+LE + GY+ A G++ D++ GI+DP+KV+R+AL +AAS++SL+ TTEA+V E+PK+ P Sbjct: 290 EDIAILTSGQVISEDVGIKLENVTLDMLGRAKKVNISKENTTIIDGAGKKAEINARVNQIKVQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRVDDALNATRAAVEEGIVAGGGTALLRAANALAIKG-SNPDQEAGINIVRRALQAPARQIATNAGEEAAIIVGKVLENNADTFGYNTATGQFGDLIALGIVDPVKVVRSALQNAASIASLLITTEAMVAEVPKKDTPMP 532
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH604_SINMW (60 kDa chaperonin 4 OS=Sinorhizobium medicae (strain WSM419) GN=groL4 PE=3 SV=1) HSP 1 Score: 239.965 bits (611), Expect = 1.769e-62 Identity = 121/239 (50.63%), Postives = 167/239 (69.87%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKE 718 QD+AVLT G +I+E++G+ LE V LDMLG ++V I KD T I+DG+GDK SI+ QI++ IE +TSDYDKEKLQERLAKL+GGVAV+++GGA+E EV EKKDR+ DALNAT+AAVEEGIV GGGV + N + G+ I++ AL+ P+ I KL++ + + G+DA YVDM+K+GI+DP KV+RTAL DA S+++L+ T EA+V ++P++ Sbjct: 290 QDIAVLTAGQMISEDIGIKLENVTLDMLGRARRVLIEKDTTTIIDGSGDKASIQACISQIKAQIEETTSDYDKEKLQERLAKLTGGVAVIRVGGATELEVKEKKDRIDDALNATRAAVEEGIVAGGGVALLRAKSALASLTGENPEITAGIAIVRKALEAPIRQIADNAGVEGSIVIGKLVDSSDQNQGFDAQTETYVDMIKAGIVDPAKVVRTALRDAGSIAALLITAEAMVADIPEK 528
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH602_GLUDA (60 kDa chaperonin 2 OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) GN=groL2 PE=3 SV=1) HSP 1 Score: 239.965 bits (611), Expect = 1.769e-62 Identity = 124/244 (50.82%), Postives = 166/244 (68.03%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEAP 733 +D+A+LTGG++I+E+LG+ LE V L LG +++ I KD+T I+DG GD +I+ R QIR+ IE +TSDYD+EKLQERLAKL+GGVA++++GG++E EV E+KDRV DALNAT+AAVEEGIVPGGG N DQ+IG I++ AL+ P+ I K+LE + G+DA GE+ D+V +GIIDP KV+RTAL DAASV SL+ TTE +V E + AP Sbjct: 290 EDIAILTGGEVISEDLGIKLESVTLSQLGQARRIVIDKDNTTIVDGEGDADAIKGRVGQIRAQIEETTSDYDREKLQERLAKLAGGVAIIRVGGSTEIEVKERKDRVDDALNATRAAVEEGIVPGGGTALARAAEVVARLQFHNDDQRIGGDIVRKALQAPLRQIAENAGEDGAVVAGKVLENGAYNFGFDAQIGEFKDLVAAGIIDPTKVVRTALQDAASVGSLLITTEVLVTEKAEPKPAAP 533
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH604_BURXL (60 kDa chaperonin 4 OS=Burkholderia xenovorans (strain LB400) GN=groL4 PE=3 SV=1) HSP 1 Score: 239.58 bits (610), Expect = 2.310e-62 Identity = 125/243 (51.44%), Postives = 167/243 (68.72%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEA 730 +D+A+LTGG +I EE G+ LEK L LG K++ + K++T ++DGAGD K+IE R +QIR+ IE +TSDYD+EKLQER+AKL+GGVAV+K+GGA+E EV EKKDRV DAL+AT+AAVEEGIVPGGGV AN DQ G++I+ AL+ P+ I K + Q + GY+A GEY D+V+SG++DP KV RTAL +A+SV+ L+ TT+A V E PK+ A Sbjct: 290 EDIAILTGGQVIAEETGLSLEKATLAELGQAKRIEVGKENTTVIDGAGDSKNIEARVKQIRTQIEEATSDYDREKLQERVAKLAGGVAVIKVGGATEIEVKEKKDRVDDALHATRAAVEEGIVPGGGVALIRVKQAISGLKGANADQDAGIKIVLRALEEPLRQIVTNAGEEASVVVAK-VAQGTGNFGYNAQTGEYGDLVQSGVLDPTKVTRTALQNASSVAGLLLTTDATVHEAPKDTPAA 531
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH602_BURCH (60 kDa chaperonin 2 OS=Burkholderia cenocepacia (strain HI2424) GN=groL2 PE=3 SV=1) HSP 1 Score: 239.58 bits (610), Expect = 2.310e-62 Identity = 126/243 (51.85%), Postives = 166/243 (68.31%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEA 730 +D+A+LTGG +I EE G+ LEK L LG K++ + K++T ++DGAGD K+IE R +QIR IE +TSDYD+EKLQER+AKL+GGVAV+K+GGA+E EV EKKDRV DAL+AT+AAVEEGIVPGGGV AN DQ G++I+ AL+ P+ I K+ E + GY+A GEY D+V+SG++DP KV RTAL +AASV+ L+ TT+A V E PK+ A Sbjct: 290 EDIAILTGGQVIAEETGLTLEKTTLAELGQAKRIEVGKENTTVIDGAGDAKNIEARVKQIRVQIEEATSDYDREKLQERVAKLAGGVAVIKVGGATEIEVKEKKDRVDDALHATRAAVEEGIVPGGGVALIRVRQAIRELKGANADQDAGIKIVLRALEEPLRQIVTNAGEEASVVVAKVAE-GTGNFGYNAQTGEYGDLVESGVLDPTKVTRTALQNAASVAGLLLTTDATVYEAPKDAAPA 531
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_NOVAD (60 kDa chaperonin OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=groL PE=3 SV=1) HSP 1 Score: 238.81 bits (608), Expect = 3.940e-62 Identity = 125/243 (51.44%), Postives = 165/243 (67.90%), Query Frame = 2 Query: 5 DLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEAP 733 D+A LT G++I+E+LG+ LE V L MLG KKVTI KD+T I+DGAG + I+ R EQIR+ IE +TSDYD+EKLQERLAKL+GGVAV+K+GGA+E EV E+KDRV DAL+AT+AAVEEGIVPGGG AN DQ G+ I++ A++ P+ I LL +++ + G++AA Y ++ +G+IDP KV+RTAL DAASVS L+ TTEA + E P + P Sbjct: 291 DIATLTAGEMISEDLGIKLESVTLAMLGQAKKVTIDKDNTTIVDGAGSAEEIKARVEQIRAQIEVTTSDYDREKLQERLAKLAGGVAVIKVGGATEVEVKERKDRVDDALHATRAAVEEGIVPGGGTALLYATKALEGLKGANDDQTKGIDIVRRAIQAPIRQIAANAGHDGAVVSGNLLRENDENQGFNAATDTYENLKAAGVIDPTKVVRTALQDAASVSGLLITTEAAISEKPDDKPAMP 533
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_BARBK (60 kDa chaperonin OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=groL PE=3 SV=1) HSP 1 Score: 238.81 bits (608), Expect = 3.940e-62 Identity = 124/244 (50.82%), Postives = 168/244 (68.85%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEAP 733 +D+AVLT G +I+E++G+ LE V L+MLG KKV +SK+ T I+DGAG K I R QI++ IE +TSDYD+EKLQERLAKL+GGVAV+++GG++E EV EKKDRV DALNAT+AAVEEGIVPGGG N DQ+ G+ II+ AL+ P I K+LE + GY+ A ++ D++ GI+DP+KV+R+AL +AAS++SL+ TTEA+V E+PK+ AP Sbjct: 290 EDIAVLTSGQVISEDVGIKLENVTLEMLGRAKKVHVSKETTTIVDGAGQKSEINARVSQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGSTEVEVKEKKDRVDDALNATRAAVEEGIVPGGGTALLRAAKALSIKG-KNPDQEAGIGIIRRALQAPARQIAHNAGEEAAVIVGKVLENCSDTFGYNTATAQFGDLISFGIVDPVKVVRSALQNAASIASLLITTEAMVAEVPKKEAAAP 532 The following BLAST results are available for this feature:
BLAST of DC900313 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900313 ID=DC900313; Name=DC900313; organism=Citrus sinensis; type=EST; length=1041bpback to top |