DC900313
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_ACIB5 (60 kDa chaperonin OS=Acinetobacter baumannii (strain AB0057) GN=groL PE=3 SV=1) HSP 1 Score: 236.113 bits (601), Expect = 2.554e-61 Identity = 123/244 (50.41%), Postives = 168/244 (68.85%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEAP 733 QD+A+LTG +I+EE+GM LE+ L LGT K+T+SK++TVI+DGAGD +I ER +QIR+ IE STS+YD+EKLQER+AKL+GGVAV+KIG A+E E+ EKKDRV DAL+AT+AAVEEG+V GGGV AN DQ G+ I++ A++ P+ I ++ + GY+AA GEY DM++ GI+DP KV R+AL AASV+ LM TTE ++ ++P++ AP Sbjct: 290 QDIAILTGATVISEEVGMSLEQATLQDLGTAHKITVSKENTVIVDGAGDAAAIAERVQQIRAQIEESTSEYDREKLQERVAKLAGGVAVIKIGAATEVEMKEKKDRVDDALHATRAAVEEGVVAGGGVALVRAVNALEGLKGANEDQTAGINILRRAIEAPLRQI-VANAGDEPSVVINAVKNGEGNFGYNAATGEYGDMLEMGILDPAKVTRSALEHAASVAGLMLTTECMITDIPEDKPAAP 532
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_ACIB3 (60 kDa chaperonin OS=Acinetobacter baumannii (strain AB307-0294) GN=groL PE=3 SV=1) HSP 1 Score: 236.113 bits (601), Expect = 2.554e-61 Identity = 123/244 (50.41%), Postives = 168/244 (68.85%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEAP 733 QD+A+LTG +I+EE+GM LE+ L LGT K+T+SK++TVI+DGAGD +I ER +QIR+ IE STS+YD+EKLQER+AKL+GGVAV+KIG A+E E+ EKKDRV DAL+AT+AAVEEG+V GGGV AN DQ G+ I++ A++ P+ I ++ + GY+AA GEY DM++ GI+DP KV R+AL AASV+ LM TTE ++ ++P++ AP Sbjct: 290 QDIAILTGATVISEEVGMSLEQATLQDLGTAHKITVSKENTVIVDGAGDAAAIAERVQQIRAQIEESTSEYDREKLQERVAKLAGGVAVIKIGAATEVEMKEKKDRVDDALHATRAAVEEGVVAGGGVALVRAVNALEGLKGANEDQTAGINILRRAIEAPLRQI-VANAGDEPSVVINAVKNGEGNFGYNAATGEYGDMLEMGILDPAKVTRSALEHAASVAGLMLTTECMITDIPEDKPAAP 532
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_ACIAD (60 kDa chaperonin OS=Acinetobacter sp. (strain ADP1) GN=groL PE=3 SV=1) HSP 1 Score: 236.113 bits (601), Expect = 2.554e-61 Identity = 123/244 (50.41%), Postives = 170/244 (69.67%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEAP 733 QD+A+LTG +I+EE+GM LE+ +L LGT K+T+SK++TVI+DGAGD +I ER +QIR+ IE STS+YDKEKLQER+AKL+GGVAV+KIG A+E E+ EKKDRV DAL+AT+AAVEEG+V GGGV + AN DQ +G+ I++ A++ P+ I ++ + GY+AA G Y DM++ GI+DP KV R+AL AASV+ LM TTEA++ ++P++ P Sbjct: 290 QDIAILTGATVISEEVGMSLEQASLQDLGTAHKITVSKENTVIVDGAGDANAIAERVQQIRAQIEESTSEYDKEKLQERVAKLAGGVAVIKIGAATEVEMKEKKDRVDDALHATRAAVEEGVVAGGGVALVRAVNSLDGLTGANDDQTVGINILRRAIEAPLRQI-VSNAGDEPSVVINAVKAGEGNYGYNAATGVYGDMLEMGILDPAKVTRSALEHAASVAGLMLTTEAMITDIPEDKPAMP 532
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH603_BURCH (60 kDa chaperonin 3 OS=Burkholderia cenocepacia (strain HI2424) GN=groL3 PE=3 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 3.336e-61 Identity = 123/239 (51.46%), Postives = 164/239 (68.62%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKE 718 +DLA+LTG +I+EE G L+K L+ LG+ K+V + KDDT+I+DGAGD IE R + IR I+ +TSDYD+EKLQER+AKL+GGVAV+K+G +E E+ EKKDRV DAL+AT+AAVEEGIVPGGGV AN DQ G++I+ AL+ P+ I K+LE + GY+AA GEY D+V +G++DP KV RTAL +AAS++SL+ TT+A V + PKE Sbjct: 290 EDLAILTGATVISEETGKQLDKATLEDLGSAKRVEVRKDDTIIIDGAGDAARIEARVKSIRVQIDEATSDYDREKLQERVAKLAGGVAVIKVGAVTEVEMKEKKDRVDDALHATRAAVEEGIVPGGGVALLRARAALSDIRGANADQDAGIRIVLRALEAPLRVIAANAGDEPSVVISKVLE-GKGNFGYNAATGEYGDLVDAGVVDPTKVTRTALQNAASIASLVLTTDATVAQAPKE 527
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH602_BURCA (60 kDa chaperonin 2 OS=Burkholderia cenocepacia (strain AU 1054) GN=groL2 PE=3 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 3.336e-61 Identity = 123/239 (51.46%), Postives = 164/239 (68.62%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKE 718 +DLA+LTG +I+EE G L+K L+ LG+ K+V + KDDT+I+DGAGD IE R + IR I+ +TSDYD+EKLQER+AKL+GGVAV+K+G +E E+ EKKDRV DAL+AT+AAVEEGIVPGGGV AN DQ G++I+ AL+ P+ I K+LE + GY+AA GEY D+V +G++DP KV RTAL +AAS++SL+ TT+A V + PKE Sbjct: 290 EDLAILTGATVISEETGKQLDKATLEDLGSAKRVEVRKDDTIIIDGAGDAARIEARVKSIRVQIDEATSDYDREKLQERVAKLAGGVAVIKVGAVTEVEMKEKKDRVDDALHATRAAVEEGIVPGGGVALLRARAALSDIRGANADQDAGIRIVLRALEAPLRVIAANAGDEPSVVISKVLE-GKGNFGYNAATGEYGDLVDAGVVDPTKVTRTALQNAASIASLVLTTDATVAQAPKE 527
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_PSYA2 (60 kDa chaperonin OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=groL PE=3 SV=1) HSP 1 Score: 235.343 bits (599), Expect = 4.357e-61 Identity = 121/238 (50.84%), Postives = 164/238 (68.91%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPK 715 +D+A LTGG +I+EE+G+ LE L+ LGT KKVT+ K++TVI+DGAG IE R E IR +E STSDYDKEKLQER+AKL+GGVAV+K+G A+E E+ EKKDRV DAL+AT+AAVEEG+VPGGGV N DQ G+ I++ A++ P+ I + ++ + + GY+AA GEY DM++ GI+DP KV R+AL +AASV+ LM TTE ++ +LP+ Sbjct: 289 EDIATLTGGTVISEEIGLSLETATLEQLGTAKKVTVGKENTVIVDGAGHSADIENRVESIRRQVEESTSDYDKEKLQERMAKLAGGVAVIKVGAATETEMKEKKDRVDDALHATRAAVEEGVVPGGGVALVRAMNALSELRGDNDDQNAGINILRRAMEAPLRQIVTNSGEEASVVVNE-VKSGSGNYGYNAASGEYGDMLEMGILDPAKVARSALENAASVAGLMLTTEVMITDLPQ 525
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_PSEHT (60 kDa chaperonin OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=groL PE=3 SV=2) HSP 1 Score: 235.343 bits (599), Expect = 4.357e-61 Identity = 122/239 (51.05%), Postives = 166/239 (69.46%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKE 718 QD+AVLTGG +I+EE+G++LEK ++ LGT K+V I+KDDT I+DGAG++ I R QI++ IE +TSDYDKEKLQER+AKL+GGVAV+K+G A+E E+ EKKDRV DALNAT+AAVEEG+VPGGGV N DQ G+++ A++ P+ I ++ + + GY+AA GEY DM++ GI+DP KV R+AL A S++ LM TTEA+V E+PK+ Sbjct: 291 QDIAVLTGGTVISEEIGLELEKATVEDLGTAKRVIITKDDTTIIDGAGEEAGINGRVSQIKAQIEEATSDYDKEKLQERMAKLAGGVAVIKVGAATEMEMKEKKDRVEDALNATRAAVEEGVVPGGGVALVRAASKLVDLVGDNEDQNHGIKVALRAMEAPLRQI-VTNAGDEASVVINAVKAGSGNFGYNAATGEYNDMIEMGILDPTKVTRSALQFAGSIAGLMITTEAMVAEIPKD 528
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_NEIMF (60 kDa chaperonin OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=groL PE=3 SV=1) HSP 1 Score: 235.343 bits (599), Expect = 4.357e-61 Identity = 121/244 (49.59%), Postives = 164/244 (67.21%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEAP 733 QD+A+LTGG +I+EE+G+ LEK LD LG K++ I K++T I+DG GD IE R +IR IE +TSDYDKEKLQER+AKL+GGVAV+K+G A+E E+ EKKDRV DAL+AT+AAVEEG+V GGGV T N DQ GVQI+ A+++P+ I K+LE + GY+A GEY DM++ G++DP KV R+AL AAS++ LM TT+ ++ E+P++ P Sbjct: 290 QDIAILTGGTVISEEVGLSLEKATLDDLGQAKRIEIGKENTTIIDGFGDAAQIEARVAEIRQQIETATSDYDKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVAGGGVALLRARAALENLHTGNADQDAGVQIVLRAVESPLRQIVANAGGEPSVVVNKVLE-GKGNYGYNAGSGEYGDMIEMGVLDPAKVTRSALQHAASIAGLMLTTDCMIAEIPEDKPAMP 532
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_NEIMA (60 kDa chaperonin OS=Neisseria meningitidis serogroup A GN=groL PE=3 SV=1) HSP 1 Score: 235.343 bits (599), Expect = 4.357e-61 Identity = 121/244 (49.59%), Postives = 164/244 (67.21%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEAP 733 QD+A+LTGG +I+EE+G+ LEK LD LG K++ I K++T I+DG GD IE R +IR IE +TSDYDKEKLQER+AKL+GGVAV+K+G A+E E+ EKKDRV DAL+AT+AAVEEG+V GGGV T N DQ GVQI+ A+++P+ I K+LE + GY+A GEY DM++ G++DP KV R+AL AAS++ LM TT+ ++ E+P++ P Sbjct: 290 QDIAILTGGTVISEEVGLSLEKATLDDLGQAKRIEIGKENTTIIDGFGDAAQIEARVAEIRQQIETATSDYDKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVAGGGVALLRARAALENLHTGNADQDAGVQIVLRAVESPLRQIVANAGGEPSVVVNKVLE-GKGNYGYNAGSGEYGDMIEMGVLDPAKVTRSALQHAASIAGLMLTTDCMIAEIPEDKPAMP 532
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_CUPTR (60 kDa chaperonin OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=groL PE=3 SV=1) HSP 1 Score: 235.343 bits (599), Expect = 4.357e-61 Identity = 123/239 (51.46%), Postives = 165/239 (69.04%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKE 718 +D+A+LTGG +I EE+G+ LEK L+ LG K++ I K++T+I+DGAGD IE R +QIR+ IE +TSDYD+EKLQER+AKL+GGVAV+K+G A+E E+ EKK RV DAL+AT+AAVEEGIVPGGGV N DQ G++I+ A++ P+ I K++E + GY+AA GEY D+V+ G++DP KV RTAL +AASV+SLM TT+ V E PKE Sbjct: 290 EDIAILTGGTVIAEEVGLTLEKATLNDLGQAKRIEIGKENTIIIDGAGDAAGIEGRVKQIRAQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVPGGGVALLRARAAISALQGDNADQNAGIKIVLRAMEEPLRQIVLNAGEEASVVVAKVIE-GKGNYGYNAASGEYGDLVEMGVLDPTKVTRTALQNAASVASLMLTTDCAVAETPKE 527 The following BLAST results are available for this feature:
BLAST of DC900313 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900313 ID=DC900313; Name=DC900313; organism=Citrus sinensis; type=EST; length=1041bpback to top |