DC900313
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_CAMFF (60 kDa chaperonin OS=Campylobacter fetus subsp. fetus (strain 82-40) GN=groL PE=3 SV=1) HSP 1 Score: 225.713 bits (574), Expect = 3.452e-58 Identity = 128/243 (52.67%), Postives = 163/243 (67.08%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEA 730 +D+A+LTGG++I+EELG LE +L LG +V I KD+T I++GAGDK SIE R QI++ I +TSDYDKEKLQERLAKLSGGVAV+K+G A+E E+ EKKDRV DALNATKAAVEEGIV GGG + D+ IG +I++ AL P+ I + D + G++AA GEYVDM ++GIIDP+KV R AL +A SV+SL+ TTEA V E+ KE K A Sbjct: 289 EDIAILTGGEVISEELGRTLESASLQDLGQADRVVIDKDNTTIVNGAGDKDSIEARINQIKAQIAETTSDYDKEKLQERLAKLSGGVAVIKVGAATETEMKEKKDRVDDALNATKAAVEEGIVVGGGAALIKAGNRVNL--SLKGDELIGAEIVKRALFAPLRQIAENAGFDAGVVANSVSCADCPNYGFNAASGEYVDMFEAGIIDPVKVERIALQNAVSVASLLLTTEATVSEI-KEDKPA 528
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_BUCAI (60 kDa chaperonin OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=groL PE=3 SV=1) HSP 1 Score: 225.713 bits (574), Expect = 3.452e-58 Identity = 122/243 (50.21%), Postives = 159/243 (65.43%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEA 730 QD+++LTGG +I+EEL M+LEK L+ LG K+V ISKD T I+ G G+K SI+ R QIR I+ +TSDYDKEKL ERLAKLSGGVAVLK+G A+E E+ EKK RV DAL+AT+AAVEEG+V GGGV N DQ +G+++ A++ P+ I ++ + GY+AA EY DM+ GI+DP KV R+AL AASV+ LM TTE +V +LPKE K + Sbjct: 290 QDISILTGGSVISEELAMELEKSTLEDLGQAKRVVISKDTTTIIGGVGEKHSIQSRISQIRQEIQEATSDYDKEKLNERLAKLSGGVAVLKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALVRVAGKIADLRGQNEDQNVGIRVALRAMEAPLRQIVSNSGEEPSVVTNN-VKDGKGNYGYNAATDEYGDMIDFGILDPTKVTRSALQYAASVAGLMITTECMVTDLPKEDKSS 531
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_BUCA5 (60 kDa chaperonin OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain 5A) GN=groL PE=3 SV=1) HSP 1 Score: 225.713 bits (574), Expect = 3.452e-58 Identity = 122/243 (50.21%), Postives = 159/243 (65.43%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEA 730 QD+++LTGG +I+EEL M+LEK L+ LG K+V ISKD T I+ G G+K SI+ R QIR I+ +TSDYDKEKL ERLAKLSGGVAVLK+G A+E E+ EKK RV DAL+AT+AAVEEG+V GGGV N DQ +G+++ A++ P+ I ++ + GY+AA EY DM+ GI+DP KV R+AL AASV+ LM TTE +V +LPKE K + Sbjct: 290 QDISILTGGSVISEELAMELEKSTLEDLGQAKRVVISKDTTTIIGGVGEKHSIQSRISQIRQEIQEATSDYDKEKLNERLAKLSGGVAVLKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALVRVAGKIADLRGQNEDQNVGIRVALRAMEAPLRQIVSNSGEEPSVVTNN-VKDGKGNYGYNAATDEYGDMIDFGILDPTKVTRSALQYAASVAGLMITTECMVTDLPKEDKSS 531
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_AMOA5 (60 kDa chaperonin OS=Amoebophilus asiaticus (strain 5a2) GN=groL PE=3 SV=1) HSP 1 Score: 225.713 bits (574), Expect = 3.452e-58 Identity = 117/241 (48.55%), Postives = 161/241 (66.80%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXK 724 +D+A+LTGG +I+EE G LE LD LGT +K+ I K++T+I++G G K+ I+ R QIRS IEN+TSDYDKEKLQERLAKLSGGVA+L IG A+E E+ EKKDRV DAL+AT+AAV+EG+V GGGV N DQ G+ I++ +L+ P+ TI K+ E D GY+A G + ++ ++G+IDP KV R AL +AAS++SL+ TTE ++ + +E K Sbjct: 289 EDIAILTGGTVISEERGYKLENATLDYLGTAEKINIDKENTLIVNGGGKKEDIQARISQIRSQIENTTSDYDKEKLQERLAKLSGGVAILYIGAATEVEMKEKKDRVDDALHATRAAVQEGVVAGGGVALIRTIPALENIEVENEDQATGINIVRTSLEAPLRTIVSNAGGEGAVIVQKIREAQG-DFGYNARTGNFENLYEAGVIDPTKVTRLALENAASIASLLLTTECVIADEKEEDK 528
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_SHEPC (60 kDa chaperonin OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=groL PE=3 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 4.508e-58 Identity = 120/238 (50.42%), Postives = 159/238 (66.81%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPK 715 QD+A+LTGG +I EE+G++LEK L+ LGT K+V I+KD+T I+DG G++ IE R QI+ IE STSDYDKEKLQER+AKL+GGVAV+K+G A+E E+ EKK RV DAL+AT+AAVEEG+VPGGGV N DQK GV I A++ P+ I ++ + + GY+A Y DM++ GI+DP KV R AL AAS++ LM TTEA+V E+P+ Sbjct: 290 QDVAILTGGTVIAEEIGLELEKATLEDLGTAKRVVITKDNTTIIDGNGEQAQIEARVSQIKQQIEESTSDYDKEKLQERMAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALVRVASKIAELEVLNEDQKHGVVIALRAMEAPLRQI-ATNAGEEASVVANTVKNGSGNFGYNAGNDTYGDMLEMGILDPTKVTRCALQFAASIAGLMITTEAMVAEIPQ 526
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_PEDPA (60 kDa chaperonin OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) GN=groL PE=3 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 4.508e-58 Identity = 120/239 (50.21%), Postives = 165/239 (69.04%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKE 718 +D+A+LTGG +IT++LG++L+ V ++ LG KVT++KDDT I++GAG ++ I ER I+ I +TSD+DKEKLQERLAKLSGGVAV+++G A+E E+ EKK R+ DALNAT+AAVEEG VPGGG A D+ GV I++ AL+ PV I KL Q +GY+AA E+VDMV++GI+DP KV R+AL +AASVS+L+ TTEA+V +LP++ Sbjct: 288 EDIAILTGGTVITDDLGLNLKDVTIEQLGQSNKVTVTKDDTTIVEGAGSQEQIAERVGIIKQQISETTSDFDKEKLQERLAKLSGGVAVIRVGAATETELKEKKYRIEDALNATRAAVEEGFVPGGGTALANVISDLEDVE-AEGDEATGVNIVRRALEEPVRQIAENAGEEGSVIVTKLKGQ-KPGVGYNAANDEWVDMVEAGIVDPTKVTRSALQNAASVSALLLTTEAVVADLPED 524
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_HAEPS (60 kDa chaperonin OS=Haemophilus parasuis serovar 5 (strain SH0165) GN=groL PE=3 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 4.508e-58 Identity = 120/242 (49.59%), Postives = 165/242 (68.18%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTA-NFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXK 724 QD+A+LT G +I+EE+GM+LEK ++ LG K+V ISKD+T I+DG GD+ I+ R QIR IE+STSDYDKEKLQER+AKL+GGVAV+K+G A+E E+ EKKDRV DAL+AT+AAVEEGI+ GGGV N +Q +G+++ A++ P+ I + ++ N + GY+AA +Y DM++ GI+DP KV R+AL AAS++ LM TTE +V +LPKE K Sbjct: 290 QDIAILTAGTVISEEIGMELEKATIEELGQAKRVVISKDNTTIIDGVGDEVQIKARVAQIRQQIEDSTSDYDKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVDDALHATRAAVEEGIIAGGGVALVRAASKVADVVKGDNEEQNVGIRLALRAMEAPLRQI-VTNAGEEASVVARNVKDGNGNYGYNAATEQYGDMLEMGILDPTKVTRSALQFAASIAGLMITTECMVTDLPKEEK 530
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_HAEDU (60 kDa chaperonin OS=Haemophilus ducreyi GN=groL PE=3 SV=2) HSP 1 Score: 225.328 bits (573), Expect = 4.508e-58 Identity = 120/242 (49.59%), Postives = 165/242 (68.18%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTA-NFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXK 724 QD+A+LT G +I+EE+GM+LEK L+ LG K+V I+KD+T I+DG GD+ I+ R QIR IE+STSDYDKEKLQER+AKL+GGVAV+K+G A+E + EKKDRV DAL+AT+AAVEEGIVPGGGV T N +Q +G+++ A++ P+ I + ++ + + GY+A EY DM++ GI+DP KV R+AL AAS++ LM TTE ++ +LPKE K Sbjct: 290 QDIAILTAGTVISEEIGMELEKATLEELGQAKRVVITKDNTTIIDGIGDEAQIKARVVQIRQQIEDSTSDYDKEKLQERVAKLAGGVAVIKVGAATEVAMKEKKDRVDDALHATRAAVEEGIVPGGGVALVRAANKVSATLTGDNEEQNVGIKLALRAMEAPLRQI-VENSGEDASVVARDVKDGSGNFGYNATTEEYGDMLEMGILDPTKVTRSALQFAASIAGLMITTECMITDLPKEDK 530
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_ENTS8 (60 kDa chaperonin OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=groL PE=3 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 4.508e-58 Identity = 119/241 (49.38%), Postives = 162/241 (67.22%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXK 724 QD+A+LTGG +I+EE+GM+LEK L+ LG K+V I+KD T I+DG GD+ +I+ R QIR IE +TSDYD+EKLQER+AKL+GGVAV+K+G A+E E+ EKK RV DAL+AT+AAVEEG+V GGGV + N DQ +G+++ A++ P+ I + D + GY+AA EY +M+ GI+DP KV R+AL A+SV+ LM TTE +V +LPKE K Sbjct: 290 QDIAILTGGTVISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGDESAIQGRVGQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALVRVAAKLTELTGQNEDQNVGIKVALRAMEAPLRQIVSNAGEEPSVVANNVKAGDG-NYGYNAATEEYGNMIDMGILDPTKVTRSALQYASSVAGLMITTECMVTDLPKEDK 529
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_BUCRM (60 kDa chaperonin OS=Buchnera aphidicola subsp. Rhopalosiphum maidis GN=groL PE=3 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 4.508e-58 Identity = 122/241 (50.62%), Postives = 159/241 (65.98%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXK 724 QD++VLTGG +I+EEL MDLEK L+ LG K+V I+KD T I+ G G+K++I+ R QIR I+ +TSDYDKEKL ERLAKLSGGVAVLK+G A+E E+ EKK RV DAL+AT+AAVEEG+V GGGV N DQ +G+++ A++ P+ I ++ + GY+AA EY DM+ GI+DP KV R+AL AASV+ LM TTE +V +LPKE K Sbjct: 290 QDISVLTGGSVISEELAMDLEKSTLEDLGQAKRVVINKDTTTIIGGVGEKQAIQSRISQIRQEIQEATSDYDKEKLNERLAKLSGGVAVLKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALVRVAGKISNLRGHNEDQNVGIRVALRAMEAPLRQIVSNSGEEPSVVTNN-VKDGKGNYGYNAATDEYGDMIDFGILDPTKVTRSALQYAASVAGLMITTECMVTDLPKEDK 529 The following BLAST results are available for this feature:
BLAST of DC900313 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900313 ID=DC900313; Name=DC900313; organism=Citrus sinensis; type=EST; length=1041bpback to top |