DC900313
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH601_VIBHA (60 kDa chaperonin 1 OS=Vibrio harveyi GN=groL1 PE=3 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 4.508e-58 Identity = 118/239 (49.37%), Postives = 166/239 (69.46%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKE 718 QD+A+LTGG +I+EE+G++LEKV L+ LG K+V I+K++T I+DG G++ I+ R QIR IE++TSDYDKEKLQER+AKL+GGVAV+K+G A+E E+ EKKDRV DAL+AT+AAVEEG+V GGGV N +Q +G+++ A++ P+ I + + + GY+AA GEY DM++ GI+DP KV R+AL AASV+ LM TTEA+V +LP++ Sbjct: 290 QDIAILTGGIVISEEVGLELEKVALEDLGQAKRVAITKENTTIIDGVGEEAMIQGRVAQIRQQIEDATSDYDKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVAGGGVALIRAASKIVDLEGDNEEQNVGIRVALRAMEAPIRQITKNAGDEESVVANNVKAGEGS-YGYNAATGEYGDMLEMGILDPTKVTRSALQFAASVAGLMITTEAMVTDLPQK 527
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_VIBHB (60 kDa chaperonin OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=groL PE=3 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 5.888e-58 Identity = 118/239 (49.37%), Postives = 166/239 (69.46%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKE 718 QD+A+LTGG +I+EE+G++LEKV L+ LG K+V I+K++T I+DG G++ I+ R QIR IE++TSDYDKEKLQER+AKL+GGVAV+K+G A+E E+ EKKDRV DAL+AT+AAVEEG+V GGGV N +Q +G+++ A++ P+ I + + + GY+AA GEY DM++ GI+DP KV R+AL AASV+ LM TTEA+V +LP++ Sbjct: 290 QDIAILTGGIVISEEVGLELEKVALEDLGQAKRVAITKENTTIIDGMGEEAMIQGRVAQIRQQIEDATSDYDKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVAGGGVALIRAASKIVDLEGDNEEQNVGIRVALRAMEAPIRQITKNAGDEESVVANNVKAGEGS-YGYNAATGEYGDMLEMGILDPTKVTRSALQFAASVAGLMITTEAMVTDLPQK 527
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_THEM4 (60 kDa chaperonin OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=groL PE=3 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 5.888e-58 Identity = 116/245 (47.35%), Postives = 166/245 (67.76%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGV-XXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEAP 733 QD+A+LTGG + +EE+G++LE + L+ LG V + KD+T+I+ G GD++ I++R QI++ IE +TS+Y+KE LQER+AKL+GGVAV+K+G A+E E+ EKK R+ DAL+AT+AAVEEGIVPGGG+ + D+KIG +I+ AL P++ I K+LEQD+ G+DA KGEY DM + GIIDP KV R+AL +AAS++ ++ TTE +VVE P+ P Sbjct: 288 QDIAILTGGIVASEEVGINLEDLTLNDLGRADVVRVKKDETIIVGGHGDQEEIKKRIAQIKAQIEQTTSEYEKETLQERMAKLAGGVAVIKVGAATETELKEKKHRIEDALSATRAAVEEGIVPGGGITLLRARKPVEKIVEELDGDEKIGAKIVYEALSAPINQIAKNAGYDGAIIIHKVLEQDDPAYGFDALKGEYCDMFERGIIDPAKVTRSALQNAASIAGMLLTTEVLVVEKPEPKNNNP 532
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_SHESW (60 kDa chaperonin OS=Shewanella sp. (strain W3-18-1) GN=groL PE=3 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 5.888e-58 Identity = 120/238 (50.42%), Postives = 159/238 (66.81%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPK 715 QD+A+LTGG +I EE+G++LEK L+ LGT K+V I+KD+T I+DG G++ IE R QI+ IE STSDYDKEKLQER+AKL+GGVAV+K+G A+E E+ EKK RV DAL+AT+AAVEEG+VPGGGV N DQK GV I A++ P+ I ++ + + GY+A Y DM++ GI+DP KV R AL AAS++ LM TTEA+V E+P+ Sbjct: 290 QDVAILTGGTVIAEEIGLELEKATLEDLGTAKRVVITKDNTTIIDGNGEQAQIEARVSQIKQQIEESTSDYDKEKLQERMAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALVRVASKIAELEVLNEDQKHGVVIALRAMEAPLRQI-ATNAGEEASVVANTVKNGSGNYGYNAGNDTYGDMLEMGILDPTKVTRCALQFAASIAGLMITTEAMVAEIPQ 526
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_POLNS (60 kDa chaperonin OS=Polynucleobacter necessarius (strain STIR1) GN=groL PE=3 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 5.888e-58 Identity = 115/239 (48.12%), Postives = 161/239 (67.36%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKE 718 +D+A+LTGG +I EE+G+ LEK L+ LG K++ + K++T+I+DGAGD K+IE R + IR +E +TSDYDKEKLQER+AKL+GGVAV+++G A+E E+ EKK RV DAL+AT+AAVEEGI+PGGGV N DQ G+ I+ A++ P+ TI ++ + GY+AA GEY D+V G+IDP KV + ALV+AASV+ L+ TT+ + E PK+ Sbjct: 290 EDIAILTGGIVIAEEIGLTLEKTTLEHLGQAKRLEVGKENTIIIDGAGDAKAIEARVKNIRVQVEEATSDYDKEKLQERVAKLAGGVAVIRVGAATEVEMKEKKARVDDALHATRAAVEEGIIPGGGVALIRAMQGIKGLKGDNADQDAGISIVLRAMQEPLRTI-VSNAGEDAGVVVNAVQASKGNNGYNAATGEYGDLVAQGVIDPTKVTKAALVNAASVAGLLLTTDCAISEAPKD 527
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_BURP8 (60 kDa chaperonin OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=groL PE=3 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 5.888e-58 Identity = 118/244 (48.36%), Postives = 162/244 (66.39%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEAP 733 +D+A+LTGG +I EE G+ LEK L LG K++ + K++T I+DGAG+ +IE R +Q+R+ IE +TSDYD+EKLQER+AKL+GGVAV+K+G A+E E+ EKK RV DAL+AT+AAVEEGIV GGGV N DQ G++I+ A++ P+ I + + GY+AA GEY D+V++G++DP KV RTAL +AASV+ L+ TT+A V ELPKE P Sbjct: 290 EDIAILTGGQVIAEETGLTLEKATLQELGQAKRIEVGKENTTIIDGAGEAANIEARVKQVRTQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVAGGGVALIRARSAISGVKGDNADQDAGIKIVLRAMEEPLRQI-VTNGGEEASVVVAAVAGGTGNYGYNAATGEYGDLVEAGVVDPTKVTRTALQNAASVAGLLLTTDAAVCELPKEDAPMP 532
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH602_GLOVI (60 kDa chaperonin 2 OS=Gloeobacter violaceus GN=groL2 PE=3 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 5.888e-58 Identity = 116/242 (47.93%), Postives = 167/242 (69.01%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTA-NFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXK 724 QD+AVLTGGD+I+E++G+ LE V +DMLG +KVTI+KD T I+ G +K ++E+R QI +E++ SD+D+EKLQERLAKL+GGVAV+K+G A+E E+ ++K R+ DALNATKAAVEEGIVPGGG D+K G +I AL+ P+ I K+ E D ++GYDA KGE+VDM+ +G+ DP KV+R+AL +AAS+++++ TTE ++V+ P++ K Sbjct: 289 QDIAVLTGGDVISEDIGLKLENVTIDMLGKARKVTITKDKTTIVAGTDNKAAVEKRIAQIHKQMEDTDSDFDREKLQERLAKLAGGVAVIKVGAATETELKDRKLRIEDALNATKAAVEEGIVPGGGTTLLHLTKKIDAIKAGLADDEKTGADLIARALEAPLRQIADNAGVEGSVIAQKVRELD-FNIGYDAMKGEFVDMLAAGVADPAKVVRSALQNAASIAAMVLTTEVLIVDKPEKKK 529
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_VIBFM (60 kDa chaperonin OS=Vibrio fischeri (strain MJ11) GN=groL PE=3 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 7.690e-58 Identity = 119/243 (48.97%), Postives = 166/243 (68.31%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEA 730 QD+AVLT G +I+EE+G++LEKV L+ LG K+VTI+K+ T I+DG+G++ I+ R QIR IE++TSDYDKEKLQER+AKL+GGVAV+K+G A+E E+ EKKDRV DAL+AT+AAVEEG+V GGGV N +Q +G+++ A++ P+ I + + + GY+AA GEY DM++ GI+DP KV R+AL AASV+ LM TTEA+V + P++ A Sbjct: 290 QDIAVLTAGSVISEEIGLELEKVVLEDLGQAKRVTITKETTTIIDGSGEETIIQGRVSQIRQQIEDATSDYDKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVAGGGVALIRVASKVAGLVGDNEEQNVGIRVALRAMEAPIRQITKNAGEEDSVVANNVKAGEGS-YGYNAATGEYGDMIEMGILDPTKVTRSALQFAASVAGLMITTEAMVTDKPQDSGSA 531
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_VIBF1 (60 kDa chaperonin OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=groL PE=3 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 7.690e-58 Identity = 119/243 (48.97%), Postives = 166/243 (68.31%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEA 730 QD+AVLT G +I+EE+G++LEKV L+ LG K+VTI+K+ T I+DG+G++ I+ R QIR IE++TSDYDKEKLQER+AKL+GGVAV+K+G A+E E+ EKKDRV DAL+AT+AAVEEG+V GGGV N +Q +G+++ A++ P+ I + + + GY+AA GEY DM++ GI+DP KV R+AL AASV+ LM TTEA+V + P++ A Sbjct: 290 QDIAVLTAGSVISEEIGLELEKVVLEDLGQAKRVTITKETTTIIDGSGEETIIQGRVSQIRQQIEDATSDYDKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVAGGGVALIRVASKVAGLVGDNEEQNVGIRVALRAMEAPIRQITKNAGEEDSVVANNVKAGEGS-YGYNAATGEYGDMIEMGILDPTKVTRSALQFAASVAGLMITTEAMVTDKPQDSGSA 531
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_THIDA (60 kDa chaperonin OS=Thiobacillus denitrificans (strain ATCC 25259) GN=groL PE=3 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 7.690e-58 Identity = 119/243 (48.97%), Postives = 159/243 (65.43%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEA 730 +D+A+LTGG +I EE+G+ LEK L LG K++ + K++T I+DGAGD +I+ R QI IE TSDYDKEKLQER AKL+GGVAV+K+G A+E E+ EKK RV DAL+AT+AAVEEGIVPGGGV N DQ GV+I+ A++ P+ I K+LE + + GY+A EY DMV G++DP KV RTAL +AAS++ LM TT+ +V +LP++ A Sbjct: 290 EDMAILTGGTVIAEEVGLSLEKATLQDLGRAKRIEVGKENTTIIDGAGDGNAIKGRIAQINKQIEEVTSDYDKEKLQERKAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVPGGGVALLRAKAAAAAIKGDNHDQDAGVKIVLRAIEEPLRQIVKNCGDEPSVVVNKVLEGEG-NFGYNAGTSEYGDMVAMGVLDPTKVTRTALQNAASIAGLMLTTDCMVADLPEDKAPA 531 The following BLAST results are available for this feature:
BLAST of DC900313 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DC900313 ID=DC900313; Name=DC900313; organism=Citrus sinensis; type=EST; length=1041bpback to top |