DC900313
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_ACTP2 (60 kDa chaperonin OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=groL PE=3 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 1.312e-57 Identity = 120/245 (48.98%), Postives = 165/245 (67.35%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTA-NFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEAP 733 QD+A+LT G +I+EE+GM+LEK L+ LG K+V I+KD+T I+DG GD+ I+ R QIR IE+STSDYDKEKLQER+AKL+ GVAV+K+G A+E + EKKDRV DAL+AT+AAVEEGIVPGGGV T N +Q +G+++ A++ P+ I + ++ N + GY+A +Y DM++ GI+DP KV R+AL AAS++ LM TTE ++ +LPKE K P Sbjct: 290 QDIAILTAGTVISEEIGMELEKATLEELGQAKRVVITKDNTTIIDGIGDEAQIKARVAQIRQQIEDSTSDYDKEKLQERVAKLACGVAVIKVGAATEVAMKEKKDRVDDALHATRAAVEEGIVPGGGVALVRAASKVAATLTGDNEEQNVGIKLALRAMEAPLRQI-VTNAGEEASVVARNVKDGNGNYGYNAGTEQYGDMLEMGILDPTKVTRSALQFAASIAGLMITTECMITDLPKEEKLDP 533
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH601_VIBVY (60 kDa chaperonin 1 OS=Vibrio vulnificus (strain YJ016) GN=groL1 PE=3 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 1.312e-57 Identity = 118/244 (48.36%), Postives = 166/244 (68.03%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEAP 733 QD+A+LTGG +I+EE+G++LEK L+ LG K+V+I+K++T I+DG G++ I+ R QIR IE++TSDYDKEKLQER+AKL+GGVAV+K+G A+E E+ EKKDRV DAL+AT+AAVEEGIV GGGV N +Q +G+++ A++ P+ I + + + GY+AA G Y DM++ GI+DP KV R+AL AASV+ LM TTEA+V +LP++ P Sbjct: 290 QDIAILTGGTVISEEVGLELEKATLEDLGQAKRVSITKENTTIIDGVGEEAMIQGRVAQIRQQIEDATSDYDKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGIVAGGGVALIRAASKIVDLQGDNEEQNVGIRVALRAMEAPLRQITKNAGDEESVVANNVRAGEGS-YGYNAATGVYGDMLEMGILDPTKVTRSALQFAASVAGLMITTEAMVTDLPQKDSGMP 532
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH601_VIBVU (60 kDa chaperonin 1 OS=Vibrio vulnificus GN=groL1 PE=3 SV=2) HSP 1 Score: 223.787 bits (569), Expect = 1.312e-57 Identity = 118/244 (48.36%), Postives = 166/244 (68.03%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEAP 733 QD+A+LTGG +I+EE+G++LEK L+ LG K+V+I+K++T I+DG G++ I+ R QIR IE++TSDYDKEKLQER+AKL+GGVAV+K+G A+E E+ EKKDRV DAL+AT+AAVEEGIV GGGV N +Q +G+++ A++ P+ I + + + GY+AA G Y DM++ GI+DP KV R+AL AASV+ LM TTEA+V +LP++ P Sbjct: 290 QDIAILTGGTVISEEVGLELEKATLEDLGQAKRVSITKENTTIIDGVGEEAMIQGRVAQIRQQIEDATSDYDKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGIVAGGGVALIRAASKIVDLQGDNEEQNVGIRVALRAMEAPLRQITKNAGDEESVVANNVRAGEGS-YGYNAATGVYGDMLEMGILDPTKVTRSALQFAASVAGLMITTEAMVTDLPQKDSGMP 532
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_PSEFS (60 kDa chaperonin OS=Pseudomonas fluorescens (strain SBW25) GN=groL PE=3 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 1.713e-57 Identity = 115/238 (48.32%), Postives = 163/238 (68.49%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPK 715 QD+AVLTGG +I+EE+G+ LE L+ LG+ K+VTISK++T+I+DGAG ++ I+ R QIR+ + ++SDYD+EKLQERLAKLSGGVAV+K+G SE E+ EKK RV DAL+AT+AAVEEG+VPGGGV + N DQ +G+ +++ A++ P+ I + ++ + GY+AA G Y DM++ GI+DP KV R+AL AAS+ L+ TTEA + + PK Sbjct: 290 QDIAVLTGGTVISEEIGLSLESATLENLGSAKRVTISKENTIIVDGAGVEQDIQARITQIRAQVAETSSDYDREKLQERLAKLSGGVAVIKVGAGSEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALIRALEALTNLTGDNADQNVGIAVLRRAVEAPLRQIAANSGDEPSVVVNE-VKNGKGNYGYNAATGVYGDMIEMGILDPTKVTRSALQAAASIGGLILTTEAAIADKPK 526
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_PASMU (60 kDa chaperonin OS=Pasteurella multocida GN=groL PE=3 SV=2) HSP 1 Score: 223.402 bits (568), Expect = 1.713e-57 Identity = 119/241 (49.38%), Postives = 160/241 (66.39%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXK 724 QD+A+LT G +I+EE+GM+LEK L+ LG K+V I+KD+T I+DG GD+ I+ R QIR IE STSDYDKEKLQER+AKL+GGVAV+K+G A+E E+ EKK RV DAL+AT+AAVEEGIV GGGV N +Q +G+++ A++ P+ I ++ + GY+A +Y DM++ GI+DP KV R+AL AASV+ LM TTE +V +LPKE K Sbjct: 290 QDIAILTAGTVISEEIGMELEKATLEDLGQAKRVVINKDNTTIIDGIGDEAQIQGRVAQIRQQIEESTSDYDKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVAGGGVALIRAASKVAGLQGDNEEQNVGIKLALRAMEAPLRQI-VANAGEEASIVASAVKNGEGNFGYNAGTEQYGDMIEMGILDPTKVTRSALQFAASVAGLMITTECMVTDLPKEDK 529
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_HELAH (60 kDa chaperonin OS=Helicobacter acinonychis (strain Sheeba) GN=groL PE=3 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 1.713e-57 Identity = 125/244 (51.23%), Postives = 162/244 (66.39%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEAP 733 +D+AVLTGG +I+EELG+ LE ++ LG ++ I KD+T I+DG G +++R QI++ I ++TSDYDKEKLQERLAKLSGGVAV+K+G ASE E+ EKKDRV DAL+ATKAAVEEGIV GGG N D+K+G +II A+K P+ I ++ + + G++A+ GEYVDM K GIIDPLKV R AL +A SVSSL+ TTEA V E+ KE K P Sbjct: 289 KDIAVLTGGQVISEELGLTLENAEVEFLGKAGRIVIDKDNTTIVDGKGHSHDVKDRVAQIKTQIASTTSDYDKEKLQERLAKLSGGVAVIKVGAASEVEMKEKKDRVDDALSATKAAVEEGIVIGGGAALIRAAQKVHLH--LNGDEKVGYEIIMRAIKAPLAQIAINAGYDGGVVVNEVQKHEG-HFGFNASNGEYVDMFKEGIIDPLKVERIALQNAVSVSSLLLTTEATVHEI-KEEKATP 528
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_ACTSZ (60 kDa chaperonin OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=groL PE=3 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 1.713e-57 Identity = 122/245 (49.80%), Postives = 162/245 (66.12%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTA-NFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEAP 733 QD+A+LT G +I+EE+GM+LEK L+ LG K+V I+KD+T I+DG GD+ I+ R QIR IE STSDYDKEKLQER+AKL+GGVAV+K+G A+E E+ EKKDRV DAL+AT+AAVEEGIV GGGV N +Q +G+++ A++ P+ I ++ + GY+A EY DM+ GI+DP KV R+AL AAS++ LM TTEA+V ELPK+ K P Sbjct: 290 QDIAILTAGTVISEEIGMELEKAALEDLGQAKRVVINKDNTTIIDGVGDEAQIKGRVAQIRQQIEESTSDYDKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGIVAGGGVALIRAASKAAANLQGDNEEQNVGIKLALRAMEAPLRQI-VANAGEEASVVASAVKNGEGNYGYNAGTEEYGDMIAMGILDPTKVTRSALQFAASIAGLMITTEAMVTELPKDDKLDP 533
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_SHEB5 (60 kDa chaperonin OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=groL PE=3 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 2.238e-57 Identity = 118/242 (48.76%), Postives = 159/242 (65.70%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKE 727 QD+A+LTGG +I EE+G++LEK L+ LGT K+V I+KD+T I+DG G++ I R QI+ +E STSDYDKEKLQER+AKL+GGVAV+K+G A+E E+ EKK RV DAL+AT+AAVEEG+VPGGGV N DQK GV I A++ P+ I ++ + + GY+A Y DM++ GI+DP KV R AL AAS++ LM TTEA+V E+P+ + Sbjct: 290 QDVAILTGGTVIAEEIGLELEKATLEDLGTAKRVVITKDNTTIIDGNGEQTQIAARVSQIKQQVEESTSDYDKEKLQERMAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALVRVASKIAEVEVLNEDQKHGVVIALRAMEAPLRQI-ATNAGEEASVVANTVKNGSGNFGYNAGNDTYGDMLEMGILDPTKVTRCALQFAASIAGLMITTEAMVAEIPQNASQ 530
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_PSEU5 (60 kDa chaperonin OS=Pseudomonas stutzeri (strain A1501) GN=groL PE=3 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 2.238e-57 Identity = 119/244 (48.77%), Postives = 164/244 (67.21%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEAP 733 QD+A+LTGG +I+EE+G+ LE L+ LG K+V ++K++T I+DGAG + IE R QIR IE++TSDYDKEKLQERLAKL+GGVAV+K+G +E E+ EKK RV DAL+AT+AAVEEG+VPGGGV N DQ +G+ +++ A++ P+ I K ++Q + + G++AA Y DM++ GI+DP KV R+AL AAS+ LM TTEA+V E+ E K AP Sbjct: 290 QDIAILTGGTVISEEVGLSLETATLEHLGNAKRVVLNKENTTIIDGAGAQADIEARVAQIRKQIEDTTSDYDKEKLQERLAKLAGGVAVIKVGAGTEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALVRALQAISELKGDNEDQNVGIALLRRAVEAPLRQIVANAGGEPSVVVDK-VKQGSGNYGFNAASDTYGDMIEMGILDPAKVTRSALQAAASIGGLMVTTEAMVAEV-VEDKPAP 531
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_PSEST (60 kDa chaperonin OS=Pseudomonas stutzeri GN=groL PE=3 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 2.238e-57 Identity = 114/239 (47.70%), Postives = 162/239 (67.78%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKE 718 QD+A+LTGG +I+EE+G+ LE L+ LG K+V ++K++T I+DGAG + IE R QIR +E++TSDYDKEKLQERLAKL+GGVAV+K+G +E E+ EKK RV DAL+AT+AAVEEG+VPGGGV N DQ +G+ +++ A++ P+ I K ++Q + G++AA Y DM++ GI+DP KV R+AL AAS+ SLM TTEA++ E+ ++ Sbjct: 290 QDIAILTGGTVISEEVGLSLETATLEHLGNAKRVVLNKENTTIIDGAGQQADIEARVAQIRKQVEDTTSDYDKEKLQERLAKLAGGVAVIKVGAGTEVEMKEKKARVEDALHATRAAVEEGVVPGGGVAWVRALQAISELKGENEDQNVGIALLRRAVEAPLRQIVTNAGGEPSVVVDK-VKQGEGNYGFNAASDTYGDMIEMGILDPAKVTRSALQAAASIGSLMITTEAMIAEVAED 527 The following BLAST results are available for this feature:
BLAST of DC900313 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900313 ID=DC900313; Name=DC900313; organism=Citrus sinensis; type=EST; length=1041bpback to top |