DC900313
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_METPP (60 kDa chaperonin OS=Methylibium petroleiphilum (strain PM1) GN=groL PE=3 SV=1) HSP 1 Score: 222.246 bits (565), Expect = 3.817e-57 Identity = 121/243 (49.79%), Postives = 161/243 (66.26%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEA 730 +D+A+LTGG +I EE+G+ LEKV L LG K+V + K++T I+DGAG IE R +Q+R IE +TSDYD+EKLQER+AKL+GGVAV+K+G A+E E+ EKK RV DAL+AT+AAVEEGIV GGGV N DQ G+++I A++ P+ I +L + GY+AA G Y DM++ GI+DP KV RTAL +AASV++LM TTEA+V E PK+ A Sbjct: 290 EDIAILTGGKVIAEEVGLTLEKVTLADLGQAKRVEVGKENTTIIDGAGAAGDIEARVKQVRVQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVAGGGVALLRAKQAAGAIKGDNADQDAGIKLILRAIEEPLRIIVTNAGDEASVVVNAVL-AGKGNYGYNAANGTYGDMIEMGILDPTKVTRTALQNAASVAALMLTTEAMVAESPKDDAPA 531
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_FRAP2 (60 kDa chaperonin OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=groL PE=3 SV=1) HSP 1 Score: 222.246 bits (565), Expect = 3.817e-57 Identity = 116/244 (47.54%), Postives = 164/244 (67.21%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEAP 733 +D+A+LTG +I+E+LGM LE+ N++ LGT +V +SKDDT I+DGAG+K +I R Q+++ + +TSDYDKEKLQERLAKLSGGVAV+++G +EAE+ EKKDRV DAL+AT+AAVEEGIV GGGV N DQ G+ +++ A++ P+ I ++ ++ + GY+AA Y DMV+ GI+DP KV R+AL AAS++ LM TTEA+V E+ ++ P Sbjct: 290 EDIAILTGATVISEDLGMKLEEANMEHLGTASRVQVSKDDTTIIDGAGNKDAIVNRVNQLKANVAEATSDYDKEKLQERLAKLSGGVAVIRVGAVTEAEMKEKKDRVDDALHATRAAVEEGIVAGGGVALIRAQKALDGLVGDNDDQNHGIALLKKAIEAPLRQIVSNAGGESSVVVNEVKAKEG-NYGYNAANDTYGDMVEMGILDPTKVTRSALQHAASIAGLMITTEAMVAEIKEDAPAMP 532
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_DESOH (60 kDa chaperonin OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=groL PE=3 SV=1) HSP 1 Score: 222.246 bits (565), Expect = 3.817e-57 Identity = 114/243 (46.91%), Postives = 167/243 (68.72%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEA 730 +D+A LTGG +++E++G++LE + L LG K++TI KD+T I+DGAG K IE R +QIR+ IE++TSDYD+EKLQERLAKL GGVAV+ +G A+E E+ EKK RV DALNAT+AAVEEG++PGGGV + ++K+GV+++ A++ P+ I K ++ + GY+AA G+Y D++ +G+IDP KV+R AL +A SV+S+M TTEA++ E P + + A Sbjct: 290 EDIATLTGGQVVSEDVGINLEGITLGDLGHAKRITIDKDNTTIVDGAGKKADIEGRVKQIRAQIEDTTSDYDREKLQERLAKLVGGVAVINVGAATETEMKEKKARVEDALNATRAAVEEGVLPGGGVALVRCLDALSKIKIKS-EEKLGVKVVMRAIEEPLRRIANNAGVEGSVVIEK-VKNETGSFGYNAATGDYGDLIAAGVIDPTKVVRFALQNACSVASVMLTTEAMIAEKPSKEEPA 530
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_DECAR (60 kDa chaperonin OS=Dechloromonas aromatica (strain RCB) GN=groL PE=3 SV=1) HSP 1 Score: 222.246 bits (565), Expect = 3.817e-57 Identity = 118/239 (49.37%), Postives = 162/239 (67.78%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKE 718 +D+A+LTGG +I EE G+ LEK L LG K++ ++K++T I+DGAG+ +IE R +QIR IE +TSDYDKEKLQER+AKL+GGVAV+K+G A+E E+ EKK RV DAL+AT+AAVEEGIV GGGV N DQ G++I+ A++ P+ I K +++ + GY+A+ GEY DMV+ G++DP KV RTAL +AASV+ LM TTE +V EL ++ Sbjct: 290 EDIAILTGGTVIAEETGLTLEKAVLKDLGQAKRIEVAKENTTIIDGAGEAAAIEARVKQIRIQIEEATSDYDKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVAGGGVALIRARAAVGKLKGDNHDQDAGIKIVLRAMEQPLREIVANAGDEPSVVVDK-VQRGKGNYGYNASTGEYGDMVEMGVLDPTKVTRTALQNAASVAGLMLTTECMVAELAED 527
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_SHEPW (60 kDa chaperonin OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=groL PE=3 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 4.985e-57 Identity = 119/244 (48.77%), Postives = 160/244 (65.57%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEAP 733 QD+A+LTGG +I EE+G++LEK L+ LGT K+V I+KDDT I+DG G++ I+ R QI+ E STSDYDKEKLQER+AKL+GGVAV+K+G A+E E+ EKK RV DAL+AT+AAVEEG+V GGGV N DQK GV I A++ P+ I ++ + GY+A Y DM++ GI+DP KV R+AL A+S++ LM TTEA+V E+P++ AP Sbjct: 290 QDIAILTGGTVIAEEIGLELEKATLEDLGTAKRVVITKDDTTIIDGTGEETQIKARVAQIKIQAEESTSDYDKEKLQERMAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALVRVASKIGEVEVINEDQKHGVVIALRAMEAPLRQIATNAGEEGSVVANN-VKNGTGNYGYNAGNDTYGDMLEMGILDPTKVTRSALQFASSIAGLMITTEAMVGEIPQDAAGAP 532
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_HELPJ (60 kDa chaperonin OS=Helicobacter pylori J99 GN=groL PE=3 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 4.985e-57 Identity = 123/244 (50.41%), Postives = 163/244 (66.80%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEAP 733 +D+A+LTGG +I+EELG+ LE ++ LG ++ I KD+T I+DG G +++R QI++ I ++TSDYDKEKLQERLAKLSGGVAV+K+G ASE E+ EKKDRV DAL+ATKAAVEEGIV GGG + D+K+G +II A+K P+ I ++ + + G++A+ G+YVDM K GIIDPLKV R AL +A SVSSL+ TTEA V E+ KE K AP Sbjct: 289 KDIAILTGGQVISEELGLSLENAEVEFLGKAGRIVIDKDNTTIVDGKGHSDDVKDRVAQIKTQIASTTSDYDKEKLQERLAKLSGGVAVIKVGAASEVEMKEKKDRVDDALSATKAAVEEGIVIGGGAALIRAAQKVHL--NLHDDEKVGYEIIMRAIKAPLAQIAINAGYDGGVVVNEVQKHEG-HFGFNASNGKYVDMFKEGIIDPLKVERIALQNAVSVSSLLLTTEATVHEI-KEEKAAP 528
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_CAMJR (60 kDa chaperonin OS=Campylobacter jejuni (strain RM1221) GN=groL PE=3 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 4.985e-57 Identity = 118/244 (48.36%), Postives = 162/244 (66.39%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEAP 733 +D+A+LTGG++I+EELG LE + LG V I KD+T I++GAG+K +I+ R QI++ I +TSDYD+EKLQERLAKLSGGVAV+K+G A+E E+ EKKDRV DAL+ATKAAVEEGIV GGG D+ IG I++ AL+ P+ I + + + G+DAAKGEYV+M++SGIIDP+KV R AL++A SV+S++ TTEA + E+ ++ P Sbjct: 289 EDIAILTGGEVISEELGRTLESATIQDLGQASSVIIDKDNTTIVNGAGEKANIDARVNQIKAQIAETTSDYDREKLQERLAKLSGGVAVIKVGAATETEMKEKKDRVDDALSATKAAVEEGIVIGGGAALIKAKAKIKLDLQG--DEAIGAAIVERALRAPLRQIAENAGFDAGVVVNSVENAKDENTGFDAAKGEYVNMLESGIIDPVKVERVALLNAVSVASMLLTTEATISEIKEDKPTMP 530
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_CAMJJ (60 kDa chaperonin OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=groL PE=3 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 4.985e-57 Identity = 118/244 (48.36%), Postives = 162/244 (66.39%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEAP 733 +D+A+LTGG++I+EELG LE + LG V I KD+T I++GAG+K +I+ R QI++ I +TSDYD+EKLQERLAKLSGGVAV+K+G A+E E+ EKKDRV DAL+ATKAAVEEGIV GGG D+ IG I++ AL+ P+ I + + + G+DAAKGEYV+M++SGIIDP+KV R AL++A SV+S++ TTEA + E+ ++ P Sbjct: 289 EDIAILTGGEVISEELGRTLESATIQDLGQASSVIIDKDNTTIVNGAGEKANIDARVNQIKAQIAETTSDYDREKLQERLAKLSGGVAVIKVGAATETEMKEKKDRVDDALSATKAAVEEGIVIGGGAALIKAKAKIKLDLQG--DEAIGAAIVERALRAPLRQIAENAGFDAGVVVNSVENAKDENTGFDAAKGEYVNMLESGIIDPVKVERVALLNAVSVASMLLTTEATISEIKEDKPTMP 530
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_CAMJE (60 kDa chaperonin OS=Campylobacter jejuni GN=groL PE=1 SV=2) HSP 1 Score: 221.861 bits (564), Expect = 4.985e-57 Identity = 118/244 (48.36%), Postives = 162/244 (66.39%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEAP 733 +D+A+LTGG++I+EELG LE + LG V I KD+T I++GAG+K +I+ R QI++ I +TSDYD+EKLQERLAKLSGGVAV+K+G A+E E+ EKKDRV DAL+ATKAAVEEGIV GGG D+ IG I++ AL+ P+ I + + + G+DAAKGEYV+M++SGIIDP+KV R AL++A SV+S++ TTEA + E+ ++ P Sbjct: 289 EDIAILTGGEVISEELGRTLESATIQDLGQASSVIIDKDNTTIVNGAGEKANIDARVNQIKAQIAETTSDYDREKLQERLAKLSGGVAVIKVGAATETEMKEKKDRVDDALSATKAAVEEGIVIGGGAALIKAKAKIKLDLQG--DEAIGAAIVERALRAPLRQIAENAGFDAGVVVNSVENAKDENTGFDAAKGEYVNMLESGIIDPVKVERVALLNAVSVASMLLTTEATISEIKEDKPTMP 530
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_CAMJ8 (60 kDa chaperonin OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=groL PE=3 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 4.985e-57 Identity = 121/243 (49.79%), Postives = 163/243 (67.08%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEA 730 +D+A+LTGG++I+EELG LE + LG V I KD+T I++GAG+K +I+ R QI++ I +TSDYD+EKLQERLAKLSGGVAV+K+G A+E E+ EKKDRV DAL+ATKAAVEEGIV GGG D+ IG I++ AL+ P+ I + + + G+DAAKGEYV+M++SGIIDP+KV R AL++A SV+S++ TTEA + E+ KE K A Sbjct: 289 EDIAILTGGEVISEELGRTLESATIQDLGQASSVIIDKDNTTIVNGAGEKANIDARVNQIKAQIAETTSDYDREKLQERLAKLSGGVAVIKVGAATETEMKEKKDRVDDALSATKAAVEEGIVIGGGAALIKAKAKIKLDLQG--DEAIGAAIVERALRAPLRQIAENAGFDAGVVVNSVENAKDENTGFDAAKGEYVNMLESGIIDPVKVERVALLNAVSVASMLLTTEATISEI-KEDKPA 528 The following BLAST results are available for this feature:
BLAST of DC900313 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DC900313 ID=DC900313; Name=DC900313; organism=Citrus sinensis; type=EST; length=1041bpback to top |