DC900313
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_AZOSE (60 kDa chaperonin OS=Azoarcus sp. (strain EbN1) GN=groL PE=3 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 4.985e-57 Identity = 119/239 (49.79%), Postives = 161/239 (67.36%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKE 718 +D+AVLTGG +I EE+G+ LEK L LG ++ I K++T+I+DGAG+ IE R +QIR+ IE +TSDYD+EKLQER+AKL+GGVAV+K+G A+E E+ EKK RV DAL+AT+AAVEEGIVPGGGV N DQ G++I+ AL+ P+ I +++E + GY+AA GEY D+V G++DP KV R AL +AASV+ LM TT+ +V EL +E Sbjct: 290 EDIAVLTGGQVIAEEVGLTLEKATLAELGQAARIEIGKENTIIIDGAGEGSRIEGRVKQIRAQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVPGGGVALLRARANLGTLKGDNHDQDAGIKIVLRALEQPLREIVANAGDEPSVVVNRVVE-GTGNFGYNAATGEYGDLVDMGVLDPTKVERIALQNAASVAGLMLTTDCMVGELAEE 527
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_PSEMY (60 kDa chaperonin OS=Pseudomonas mendocina (strain ymp) GN=groL PE=3 SV=1) HSP 1 Score: 221.476 bits (563), Expect = 6.510e-57 Identity = 115/235 (48.94%), Postives = 159/235 (67.66%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVE 706 QD+A+LTGG +I+EE+G+ LE L+ LG K+V ++KD+T I+DGAG + IE R QIR +E ++SDYDKEKLQERLAKL+GGVAV+K+G A+E E+ EKK RV DAL+AT+AAVEEG+VPGGGV N DQ +G+ +++ A++ P+ I K ++Q + + G++AA Y DM++ GI+DP KV R+AL AAS+ LM TTEA+V E Sbjct: 290 QDIAILTGGTVISEEVGLSLESATLEHLGNAKRVVLNKDNTTIIDGAGAQADIEARVAQIRKQVEETSSDYDKEKLQERLAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALVRALQAIEGLKGDNEDQNVGIALLRRAVEAPLRQIVANAGGEPSVVVDK-VKQGSGNFGFNAATDTYGDMIEMGILDPAKVTRSALQAAASIGGLMITTEAMVAE 523
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_PSEAE (60 kDa chaperonin OS=Pseudomonas aeruginosa GN=groL PE=1 SV=3) HSP 1 Score: 221.476 bits (563), Expect = 6.510e-57 Identity = 116/239 (48.54%), Postives = 164/239 (68.62%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKE 718 QD+A+LTGG +I+EE+G+ LE L+ LG K+V I+K++T I+DGAG + IE R QIR IE +TSDYD+EKLQERLAKL+GGVAV+K+G A+E E+ EKK RV DAL+AT+AAVEEG+VPGGGV N +Q +G+ +++ A+++P+ I K ++Q + + G++AA G Y DM++ GI+DP KV R+AL AAS+ LM TTEA+V E+ ++ Sbjct: 290 QDIAILTGGTVISEEVGLSLEGATLEHLGNAKRVVINKENTTIIDGAGVQADIEARVLQIRKQIEETTSDYDREKLQERLAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALVRALQAIEGLKGDNEEQNVGIALLRRAVESPLRQIVANAGDEPSVVVDK-VKQGSGNYGFNAATGVYGDMIEMGILDPAKVTRSALQAAASIGGLMITTEAMVAEIVED 527
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_PSEAB (60 kDa chaperonin OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=groL PE=3 SV=1) HSP 1 Score: 221.476 bits (563), Expect = 6.510e-57 Identity = 116/239 (48.54%), Postives = 164/239 (68.62%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKE 718 QD+A+LTGG +I+EE+G+ LE L+ LG K+V I+K++T I+DGAG + IE R QIR IE +TSDYD+EKLQERLAKL+GGVAV+K+G A+E E+ EKK RV DAL+AT+AAVEEG+VPGGGV N +Q +G+ +++ A+++P+ I K ++Q + + G++AA G Y DM++ GI+DP KV R+AL AAS+ LM TTEA+V E+ ++ Sbjct: 290 QDIAILTGGTVISEEVGLSLEGATLEHLGNAKRVVINKENTTIIDGAGVQADIEARVLQIRKQIEETTSDYDREKLQERLAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALVRALQAIEGLKGDNEEQNVGIALLRRAVESPLRQIVANAGDEPSVVVDK-VKQGSGNYGFNAATGVYGDMIEMGILDPAKVTRSALQAAASIGGLMITTEAMVAEIVED 527
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_PSEA8 (60 kDa chaperonin OS=Pseudomonas aeruginosa (strain LESB58) GN=groL PE=3 SV=1) HSP 1 Score: 221.476 bits (563), Expect = 6.510e-57 Identity = 116/239 (48.54%), Postives = 164/239 (68.62%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKE 718 QD+A+LTGG +I+EE+G+ LE L+ LG K+V I+K++T I+DGAG + IE R QIR IE +TSDYD+EKLQERLAKL+GGVAV+K+G A+E E+ EKK RV DAL+AT+AAVEEG+VPGGGV N +Q +G+ +++ A+++P+ I K ++Q + + G++AA G Y DM++ GI+DP KV R+AL AAS+ LM TTEA+V E+ ++ Sbjct: 290 QDIAILTGGTVISEEVGLSLEGATLEHLGNAKRVVINKENTTIIDGAGVQADIEARVLQIRKQIEETTSDYDREKLQERLAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALVRALQAIEGLKGDNEEQNVGIALLRRAVESPLRQIVANAGDEPSVVVDK-VKQGSGNYGFNAATGVYGDMIEMGILDPAKVTRSALQAAASIGGLMITTEAMVAEIVED 527
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_NITSB (60 kDa chaperonin OS=Nitratiruptor sp. (strain SB155-2) GN=groL PE=3 SV=1) HSP 1 Score: 221.476 bits (563), Expect = 6.510e-57 Identity = 118/244 (48.36%), Postives = 161/244 (65.98%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEAP 733 QD+A+LTGG +I+EE+G LE L+ LG ++ + K++T I+ G GDK ++E R ++I++ IE +TS+YDKEKLQERLAKL+GGVAV+K+G A+E E+ EKKDRV DAL ATKAAVEEGIV GGG D+KIG +II A+K P+ I + +N + G++AA GEYVDM ++GI+DP KV R AL +A SV+SL+ TTEA V E+ ++ AP Sbjct: 291 QDIAILTGGQVISEEVGRTLESATLEDLGQADRIVVDKENTTIVGGKGDKAAVEARIKEIKAQIEQTTSEYDKEKLQERLAKLAGGVAVIKVGAATETEMKEKKDRVDDALAATKAAVEEGIVIGGGTALVRAANKVNLDLCG--DEKIGAEIILRAIKAPLKQIAENAGFDPGVVANNVENAENENTGFNAATGEYVDMFEAGIVDPAKVERVALQNAVSVASLLLTTEATVSEIKEDKPAAP 532
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_MARAV (60 kDa chaperonin OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=groL PE=3 SV=1) HSP 1 Score: 221.476 bits (563), Expect = 6.510e-57 Identity = 118/241 (48.96%), Postives = 164/241 (68.05%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXK 724 QD+A+LTGG +I+EE+G+ LE LD LGT K+V ++K++T I+ GAG + I R EQIR IE+S+SDYDKEKLQER+AKL+GGVAV+K+G SE E+ EKK RV DAL++T+AAVEEGIV GGGV N +QK GV I++ A++ P+ I K+ E + + G++AA +Y DM++ GI+DP KV R++L AASV+SL+ TTEA+V + P++ K Sbjct: 290 QDIAILTGGTVISEEVGLTLENTTLDDLGTAKRVNVTKENTTIIGGAGAEADISARVEQIRKQIEDSSSDYDKEKLQERVAKLAGGVAVIKVGAGSEVEMKEKKARVEDALHSTRAAVEEGIVAGGGVTLIRAIAALDKVDAINDEQKAGVNILRRAMEAPLRQIVFNAGGESSVVVAKVKEGEGS-FGFNAATEQYGDMLEMGILDPAKVTRSSLQAAASVASLIITTEAMVADEPEDDK 529
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_CAMJD (60 kDa chaperonin OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=groL PE=3 SV=1) HSP 1 Score: 221.476 bits (563), Expect = 6.510e-57 Identity = 120/243 (49.38%), Postives = 163/243 (67.08%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEA 730 +D+A+LTGG++I+EELG LE + LG V I KD+T +++GAG+K +I+ R QI++ I +TSDYD+EKLQERLAKLSGGVAV+K+G A+E E+ EKKDRV DAL+ATKAAVEEGIV GGG D+ IG I++ AL+ P+ I + + + G+DAAKGEYV+M++SGIIDP+KV R AL++A SV+S++ TTEA + E+ KE K A Sbjct: 289 EDIAILTGGEVISEELGRTLESATIQDLGQASSVIIDKDNTTVVNGAGEKANIDARVNQIKAQIAETTSDYDREKLQERLAKLSGGVAVIKVGAATETEMKEKKDRVDDALSATKAAVEEGIVIGGGAALIKAKAKIKLDLQG--DEAIGAAIVERALRAPLRQIAENAGFDAGVVVNSVENAKDENTGFDAAKGEYVNMLESGIIDPVKVERVALLNAVSVASMLLTTEATISEI-KEDKPA 528
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH602_MOOTA (60 kDa chaperonin 2 OS=Moorella thermoacetica (strain ATCC 39073) GN=groL2 PE=3 SV=1) HSP 1 Score: 221.476 bits (563), Expect = 6.510e-57 Identity = 116/244 (47.54%), Postives = 164/244 (67.21%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEAP 733 QD+A+LTGG +ITEE G+ LE LDMLG ++V + K++T I++G G +++IE R QIR E STSDYD+EKLQERLAKL+GGVAV+K+G A+E E+ EKK R+ DAL AT+AAVEEGIVPGGG A D+ GV+++ AL+ P+ I K + Q +G++AA EYV++ ++GI+DPLKV R+AL +AAS++SL+ TTE+++ ++P+E P Sbjct: 288 QDIAILTGGQVITEEAGLKLENTTLDMLGQARQVRVGKEETTIVEGRGKEEAIEARIAQIRREYEESTSDYDREKLQERLAKLAGGVAVIKVGAATETEMKEKKMRIEDALAATRAAVEEGIVPGGGTALVRAQTALDGVQ-AQGDELTGVRLVYRALEEPMRQIAANAGVDGSVVVEK-VRQSGDSMGFNAATREYVNLFEAGIVDPLKVTRSALENAASIASLVLTTESLIADIPEEEPPVP 529
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_WOLSU (60 kDa chaperonin OS=Wolinella succinogenes GN=groL PE=3 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 8.502e-57 Identity = 124/243 (51.03%), Postives = 157/243 (64.61%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEA 730 +D+A LTGG +I+EE+G LE + LG +V I KD++ I+DG G K + R QIR+ IE +TSDYD+EKLQERLAKLSGGVAV+K+G ASE E+ EKKDRV DAL+ATKAAVEEGIV GGG + D+KIG +II+ A+ P+ I + + N + G++AA GEYVDM GIIDPLKV R AL +A SVSSL+ TTEA + E+ KE K A Sbjct: 290 KDIATLTGGSVISEEIGKTLESATIADLGQAARVVIDKDNSTIVDGKGSKDEVNARVAQIRTQIEATTSDYDREKLQERLAKLSGGVAVIKVGAASEVEMKEKKDRVDDALSATKAAVEEGIVIGGGAALIRAAAKVKLELSG--DEKIGYEIIKRAISAPLKQIAQNAGFDAGVVANNVEQNGNENFGFNAANGEYVDMFAEGIIDPLKVARIALQNAVSVSSLLLTTEATISEI-KEDKPA 529 The following BLAST results are available for this feature:
BLAST of DC900313 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900313 ID=DC900313; Name=DC900313; organism=Citrus sinensis; type=EST; length=1041bpback to top |