DC900313
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH601_RHOP2 (60 kDa chaperonin 1 OS=Rhodopseudomonas palustris (strain HaA2) GN=groL1 PE=3 SV=1) HSP 1 Score: 250.751 bits (639), Expect = 1.002e-65 Identity = 129/243 (53.09%), Postives = 168/243 (69.14%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEA 730 +D+A+LTGG LI+EE+G+ LE V L MLG KKV I K++T I+ GAG K IE R +QI++ IE ++SDYD+EKLQERLAKL+GGVAV+++GGA+E EV EKKDRV DALNAT+AAV+EGIVPGGGV N D + G+ I+ AL+ P+ I K+LE + G+DA +YVDM+ GI+DP KV+RTAL DA+SV++L+ TTEA+V ELPKE A Sbjct: 290 EDIAILTGGQLISEEIGIKLESVTLKMLGRAKKVVIDKENTTIVGGAGKKPDIEARVQQIKAQIEETSSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRVEDALNATRAAVQEGIVPGGGVALLRAKKAVGRIHNDNADVQAGINIVLKALEAPIRQIAENAGVEGSIVVGKILENKSETFGFDAQTEDYVDMLAKGIVDPAKVVRTALQDASSVAALLVTTEAMVAELPKEAAPA 532
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_SULSY (60 kDa chaperonin OS=Sulfurihydrogenibium sp. (strain YO3AOP1) GN=groL PE=3 SV=1) HSP 1 Score: 250.366 bits (638), Expect = 1.309e-65 Identity = 126/244 (51.64%), Postives = 171/244 (70.08%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEAP 733 QD+A+LTGG ITE+LG+ LE V+LDMLG KV + KD+T I+ G G+ + I+ R EQI+ IE +TS+YDKEKLQERLAKL+GGVA++K+G A+EAE+ EKKDRV DA++ATKAAVEEGIVPGGG+ N D+ G++I++NA K P+ I K+ + DN + G+DAA GEYVDMV++GIIDP KV+RTAL +AAS++ M T E +V E+ ++ ++ P Sbjct: 290 QDIAILTGGTAITEDLGIKLESVDLDMLGKADKVVVDKDNTTIIGGKGNPEDIKARIEQIKKQIETTTSEYDKEKLQERLAKLAGGVAIIKVGAATEAELKEKKDRVDDAVHATKAAVEEGIVPGGGIAIFRASRALCNIKEENTDKAWGIKIVKNACKVPLKQIAYNAGFEGSVIIEKIKDVDNVNYGFDAATGEYVDMVEAGIIDPTKVVRTALQNAASIAGTMLTAECLVAEIKEKEEKLP 533
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_JANSC (60 kDa chaperonin OS=Jannaschia sp. (strain CCS1) GN=groL PE=3 SV=1) HSP 1 Score: 250.366 bits (638), Expect = 1.309e-65 Identity = 130/237 (54.85%), Postives = 164/237 (69.20%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELP 712 QD+A+LTGG +I E+LGM LE V +DMLGT K++TISKD+T I+DGAG+K IE R QIR IE STSDYD+EKLQER+AKL+GGVAV+K+GG SE EV E+KDRV DALNAT+AAV+EGIV GGGV N DQ G+ I++ AL+ P+ I K+ E D+ G++A EY D+ K G+IDP KV+RTAL DAASV+ L+ TTEA+V + P Sbjct: 289 QDIAILTGGQVIAEDLGMKLESVTMDMLGTAKRLTISKDETTIVDGAGNKPEIEARVAQIRQQIEESTSDYDREKLQERVAKLAGGVAVIKVGGMSEIEVKERKDRVDDALNATRAAVQEGIVVGGGVALVQGGKSLAGLEGENADQNAGIAIVRRALEAPLRQIAENSGVDGSVVAGKIRESDDNAFGFNAQTEEYGDLFKFGVIDPAKVVRTALQDAASVAGLLITTEAMVADKP 525
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_GLUOX (60 kDa chaperonin OS=Gluconobacter oxydans GN=groL PE=3 SV=1) HSP 1 Score: 250.366 bits (638), Expect = 1.309e-65 Identity = 128/244 (52.46%), Postives = 174/244 (71.31%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEAP 733 +D+A+LTGG +I+E++G+ LE V L+MLG KK+ I K++T I++GAG+ I+ RC QIR+ IE +TSDYD+EKLQERLAKL+GGVAV+++GG++E EV E+KDRV DAL+AT+AAVEEGIVPGGG + N DQ++G +I++ AL+ P+ I K+LE + G+DA KGEY D+V +GIIDP KV+RTAL DAASV L+ TTEA+V E P+ K+AP Sbjct: 290 EDIAILTGGQVISEDIGIKLESVTLEMLGRAKKIHIEKENTTIVEGAGNSDDIKGRCNQIRAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGSTEVEVKERKDRVDDALHATRAAVEEGIVPGGGTALARASSALKGLTFDNDDQRVGGEIVRKALQAPLRQIAFNAGEDGAVIAGKVLENEGYVFGFDAQKGEYKDLVAAGIIDPTKVVRTALQDAASVGGLLITTEAMVAERPE--KKAP 531
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_RHOS5 (60 kDa chaperonin OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=groL PE=3 SV=1) HSP 1 Score: 249.98 bits (637), Expect = 1.709e-65 Identity = 131/244 (53.69%), Postives = 171/244 (70.08%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEAP 733 QD+A+LTGG +I+E+LGM LE V +DMLG KKV+I+KD+T I+DGAG+K IE R QIR+ IE +TSDYD+EKLQER+AKL+GGVAV+++GG +E EV E+KDRV DALNAT+AAV+EGIV GGGV + N DQ G+ I++ AL+ P+ I K+ E D+ G++A EY DM K G+IDP KV+RTAL DAASV+SL+ TTEA++ + P E K AP Sbjct: 290 QDIAILTGGQVISEDLGMKLENVTIDMLGRAKKVSINKDNTTIVDGAGEKAEIEARVSQIRTQIEETTSDYDREKLQERVAKLAGGVAVIRVGGMTEVEVKERKDRVDDALNATRAAVQEGIVVGGGVALIQAGKVLDGLTGENPDQNAGITIVRRALEAPLRQIAQNAGVDGSVVAGKVRESDDKAFGFNAQTEEYGDMFKFGVIDPAKVVRTALEDAASVASLLITTEAMIADKP-EPKSAP 532
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_RHOPA (60 kDa chaperonin OS=Rhodopseudomonas palustris GN=groL PE=3 SV=1) HSP 1 Score: 249.98 bits (637), Expect = 1.709e-65 Identity = 131/244 (53.69%), Postives = 171/244 (70.08%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEAP 733 QD+A+LTGG +I+E+LGM LE V +DMLG KKV+I+KD+T I+DGAG+K IE R QIR+ IE +TSDYD+EKLQER+AKL+GGVAV+++GG +E EV E+KDRV DALNAT+AAV+EGIV GGGV + N DQ G+ I++ AL+ P+ I K+ E D+ G++A EY DM K G+IDP KV+RTAL DAASV+SL+ TTEA++ + P E K AP Sbjct: 290 QDIAILTGGQVISEDLGMKLENVTIDMLGRAKKVSINKDNTTIVDGAGEKAEIEARVSQIRTQIEETTSDYDREKLQERVAKLAGGVAVIRVGGMTEVEVKERKDRVDDALNATRAAVQEGIVVGGGVALIQAGKVLDGLTGENPDQNAGITIVRRALEAPLRQIAQNAGVDGSVVAGKVRESDDKAFGFNAQTEEYGDMFKFGVIDPAKVVRTALEDAASVASLLITTEAMIADKP-EPKSAP 532
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH601_RHIL3 (60 kDa chaperonin 1 OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=groL1 PE=3 SV=1) HSP 1 Score: 249.98 bits (637), Expect = 1.709e-65 Identity = 128/239 (53.56%), Postives = 175/239 (73.22%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKE 718 +D+A+LTGG +I+E+LG+ LE V LDMLG KKV+ISK++T I+DG+G K IE R QI++ IE +TSDYD+EKLQERLAKL+GGVAV+++GG++E EV EKKDR+ DALNAT+AAV+EGIVPGGG+ AN DQ+ G+ I++ AL++ V I K+L+++ + GY+A EY DM+ GI+DPLKV+RTAL +AASV+SL+ TTEA++ ELPK+ Sbjct: 290 EDIAILTGGTVISEDLGIKLESVTLDMLGRAKKVSISKENTTIVDGSGAKTDIEGRVAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGSTEVEVKEKKDRIDDALNATRAAVQEGIVPGGGIALLRSSTKITVKG-ANDDQEAGINIVRRALQSLVRQIAENAGDEASIVVGKVLDKNEDNFGYNAQTSEYGDMIAMGIVDPLKVVRTALQNAASVASLLITTEAMIAELPKK 527
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_GRABC (60 kDa chaperonin OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=groL PE=3 SV=1) HSP 1 Score: 249.595 bits (636), Expect = 2.232e-65 Identity = 128/244 (52.46%), Postives = 174/244 (71.31%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKEXKEAP 733 +D+A+LTGG +I+E+LG+ LE V L LGT K+V I K++T I++GAG I+ RC QIR+ E +TSDYD+EKLQERLAKL+GGVAV+++GG++E EV E+KDRV DAL+AT+AAVEEGIVPGGGV N DQK+G++II+ AL++P+ I K+LE + G+DA GE+ D+V +GIIDP KV+RTAL DAASV++L+ TTEA++ E P+ K+AP Sbjct: 290 EDIAILTGGTVISEDLGIKLETVTLQQLGTAKRVLIEKENTTIVEGAGSPDDIKGRCSQIRAQAEETTSDYDREKLQERLAKLAGGVAVIRVGGSTEVEVKERKDRVDDALHATRAAVEEGIVPGGGVALARASLKLADLGYDNGDQKVGIEIIRRALQSPLRQISENAGEDGAVIAGKVLENGTYNFGFDAQTGEFKDLVSAGIIDPAKVVRTALQDAASVAALLITTEAMIAEKPE--KKAP 531
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH60_DICNV (60 kDa chaperonin OS=Dichelobacter nodosus (strain VCS1703A) GN=groL PE=3 SV=1) HSP 1 Score: 249.595 bits (636), Expect = 2.232e-65 Identity = 129/239 (53.97%), Postives = 171/239 (71.55%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKE 718 +D+A+LTGG +I+EE+G+ LE V LD LGT K+VT+ KD+T I+DG+G+K +IE R IR IE S+SDYDKEKLQER+AKL+GGVAV+K+G A+E E+ EKKDRV DAL+AT+AAVEEGIVPGGGV N+DQ++G+ I + A++ P+ TI ++ D GYDAA G+YVDMV +GIIDP KV R+AL +AASV+ LM TTEA+V E+P++ Sbjct: 290 EDIAILTGGTVISEEVGLTLESVTLDQLGTAKRVTVGKDNTTIIDGSGEKSAIEARVALIRHQIEESSSDYDKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGIVPGGGVALIRAINSIVDLKGDNYDQQVGIDIARRAMEYPLRTIVSNAGSEAAVVLERVKSGKGND-GYDAATGQYVDMVAAGIIDPTKVTRSALQNAASVAGLMITTEAMVSEIPQK 527
BLAST of DC900313 vs. ExPASy Swiss-Prot
Match: CH603_SINMW (60 kDa chaperonin 3 OS=Sinorhizobium medicae (strain WSM419) GN=groL3 PE=3 SV=1) HSP 1 Score: 249.595 bits (636), Expect = 2.232e-65 Identity = 125/239 (52.30%), Postives = 171/239 (71.55%), Query Frame = 2 Query: 2 QDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVXXXXXXXXXXXXSTANFDQKIGVQIIQNALKTPVHTIXXXXXXXXXXXXXKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKE 718 +D+A+LTGG +++E+LG+ LE V L+MLG KKV+I K++T I+DGAG K IE R QIR+ IE +TSDYD+EKLQERLAKL+GGVAV+++GG++E EV EKKDRV DAL+AT+AAVEEGI+PGGG+ TAN DQ++G++I++ A++ PV I KL E+ G++A EY D+ G+IDP+KV+RTAL DAASV+ L+ TTEA++ E PK+ Sbjct: 290 EDIAILTGGTVVSEDLGIMLENVTLEMLGRAKKVSIEKENTTIIDGAGSKTEIEGRTAQIRAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGSTEVEVKEKKDRVDDALHATRAAVEEGILPGGGIALLRAVNALDGLKTANDDQRVGIEIVRRAIEAPVRQIAENAGAEGSIIVGKLREKVEFSYGWNAQTNEYGDLYTMGVIDPVKVVRTALQDAASVAGLLVTTEAMIAEKPKK 528 The following BLAST results are available for this feature:
BLAST of DC900313 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DC900313 ID=DC900313; Name=DC900313; organism=Citrus sinensis; type=EST; length=1041bpback to top |