DC900308
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900308 vs. ExPASy Swiss-Prot
Match: METK_ACIF2 (S-adenosylmethionine synthetase OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=metK PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.911e-22 Identity = 54/92 (58.70%), Postives = 68/92 (73.91%), Query Frame = 3 Query: 66 AKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 341 AK+IVA GLARRC VQV+YAIGV +P+S+ VD++GTG I D I +V+E FD RP + LDL R + KTAAYGHFGR++P+FTWE Sbjct: 286 AKNIVAAGLARRCEVQVAYAIGVSQPVSLMVDTFGTGVIDDDRIAALVQEHFDLRPKGIIQMLDLLR---PIYAKTAAYGHFGREEPEFTWE 374
BLAST of DC900308 vs. ExPASy Swiss-Prot
Match: METK_SACD2 (S-adenosylmethionine synthetase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=metK PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.496e-22 Identity = 54/92 (58.70%), Postives = 67/92 (72.83%), Query Frame = 3 Query: 66 AKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 341 AK+IVA GLA RC +QVSYAIGV EP S+ V+++GTG I D EI K+V + FD RP + LDL R + KTAAYGHFGR++P+FTWE Sbjct: 284 AKNIVAAGLASRCEIQVSYAIGVAEPTSISVNTFGTGSIADSEISKLVAQHFDLRPRGIIEMLDLLR---PIYRKTAAYGHFGREEPEFTWE 372
BLAST of DC900308 vs. ExPASy Swiss-Prot
Match: METK_PELCD (S-adenosylmethionine synthetase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=metK PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.496e-22 Identity = 51/92 (55.43%), Postives = 68/92 (73.91%), Query Frame = 3 Query: 66 AKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 341 AK++VA LAR+C VQ++YAIGV EP+S+ V+++GTG +P EI +IV+E FD RP + LDL R + KTAAYGHFGR+ P+FTWE Sbjct: 287 AKNVVAAKLARKCEVQIAYAIGVAEPVSIMVNTFGTGVLPSNEIARIVREEFDMRPAAIIETLDLLR---PIYRKTAAYGHFGRELPEFTWE 375
BLAST of DC900308 vs. ExPASy Swiss-Prot
Match: METK_GEOSL (S-adenosylmethionine synthetase OS=Geobacter sulfurreducens GN=metK PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.496e-22 Identity = 54/92 (58.70%), Postives = 66/92 (71.74%), Query Frame = 3 Query: 66 AKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 341 AK++VA GL RC VQV+YAIGV EP+SV VD+ GTGKIP I +I++E FD RP + LDL R + KTAAYGHFGR+ P+FTWE Sbjct: 287 AKNLVAAGLCERCEVQVAYAIGVAEPVSVMVDTAGTGKIPSARIAEIIREVFDLRPRAIIEQLDLLR---PIYRKTAAYGHFGRELPEFTWE 375
BLAST of DC900308 vs. ExPASy Swiss-Prot
Match: METK_BORPE (S-adenosylmethionine synthetase OS=Bordetella pertussis GN=metK PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.496e-22 Identity = 53/92 (57.61%), Postives = 69/92 (75.00%), Query Frame = 3 Query: 66 AKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 341 AK++VA GLAR+C VQVSYAIGV EP+++ V + GTG IPD++I K+V+E FD RP + LDL R + KTAAYGHFGR +P+F+WE Sbjct: 287 AKNVVAAGLARQCQVQVSYAIGVAEPINITVYTEGTGVIPDEQIAKLVREHFDLRPKGIVNMLDLLR---PIYTKTAAYGHFGRSEPEFSWE 375
BLAST of DC900308 vs. ExPASy Swiss-Prot
Match: METK_BORPA (S-adenosylmethionine synthetase OS=Bordetella parapertussis GN=metK PE=3 SV=2) HSP 1 Score: 105.531 bits (262), Expect = 2.496e-22 Identity = 53/92 (57.61%), Postives = 69/92 (75.00%), Query Frame = 3 Query: 66 AKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 341 AK++VA GLAR+C VQVSYAIGV EP+++ V + GTG IPD++I K+V+E FD RP + LDL R + KTAAYGHFGR +P+F+WE Sbjct: 287 AKNVVAAGLARQCQVQVSYAIGVAEPINITVYTEGTGVIPDEQIAKLVREHFDLRPKGIVNMLDLLR---PIYTKTAAYGHFGRSEPEFSWE 375
BLAST of DC900308 vs. ExPASy Swiss-Prot
Match: METK_BORBR (S-adenosylmethionine synthetase OS=Bordetella bronchiseptica GN=metK PE=3 SV=2) HSP 1 Score: 105.531 bits (262), Expect = 2.496e-22 Identity = 53/92 (57.61%), Postives = 69/92 (75.00%), Query Frame = 3 Query: 66 AKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 341 AK++VA GLAR+C VQVSYAIGV EP+++ V + GTG IPD++I K+V+E FD RP + LDL R + KTAAYGHFGR +P+F+WE Sbjct: 287 AKNVVAAGLARQCQVQVSYAIGVAEPINITVYTEGTGVIPDEQIAKLVREHFDLRPKGIVNMLDLLR---PIYTKTAAYGHFGRSEPEFSWE 375
BLAST of DC900308 vs. ExPASy Swiss-Prot
Match: METK_THENN (S-adenosylmethionine synthetase OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=metK PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.259e-22 Identity = 49/102 (48.04%), Postives = 77/102 (75.49%), Query Frame = 3 Query: 42 KSVHHVA--AAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 341 +S H++A AK++VA GLA + ++Q+SYAIGV +P+S+ +D++GT K+ ++++LK++ E FDFRPG + L+L R + KTAAYGHFGR++ +FTWE Sbjct: 283 RSAHYMARYVAKNVVAAGLADKFLIQLSYAIGVAKPVSILIDTFGTAKVDEEKLLKVITEIFDFRPGAIIKKLNLLR---PIYRKTAAYGHFGRNEEEFTWE 381
BLAST of DC900308 vs. ExPASy Swiss-Prot
Match: METK_SYMTH (S-adenosylmethionine synthetase OS=Symbiobacterium thermophilum GN=metK PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.259e-22 Identity = 50/92 (54.35%), Postives = 69/92 (75.00%), Query Frame = 3 Query: 66 AKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 341 AK+IVA GLAR+C VQV+YAIGV P+S+ V ++GTGK+PD+ + ++V+E+FD RPG + +LDL+R + + AAYGHFGR D D WE Sbjct: 296 AKNIVAAGLARKCEVQVAYAIGVAHPVSILVTTFGTGKLPDERLAQLVRETFDLRPGAIIRDLDLRR---PIYRQVAAYGHFGRPDLDLPWE 384
BLAST of DC900308 vs. ExPASy Swiss-Prot
Match: METK_POLSQ (S-adenosylmethionine synthetase OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=metK PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.259e-22 Identity = 50/92 (54.35%), Postives = 70/92 (76.09%), Query Frame = 3 Query: 66 AKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 341 AK++VA GLA +C++Q+SYAIGV +P SV V ++GTGKI D++I ++V E+FD RP + L+L R + KTAAYGHFGR++P+FTWE Sbjct: 286 AKNVVAAGLASKCLIQISYAIGVAKPTSVMVSTFGTGKISDEKIAQLVSENFDLRPKGIVKMLNLLR---PIYRKTAAYGHFGREEPEFTWE 374 The following BLAST results are available for this feature:
BLAST of DC900308 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900308 ID=DC900308; Name=DC900308; organism=Citrus sinensis; type=EST; length=662bpback to top |