DC900303

Overview
NameDC900303
Unique NameDC900303
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length658
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900303 vs. ExPASy Swiss-Prot
Match: TIP23_MAIZE (Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 5.884e-24
Identity = 73/178 (41.01%), Postives = 101/178 (56.74%), Query Frame = 2
Query:    2 IFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANT-VASGYNKGSALGAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFV-GALAAAAY 526
            +FV V   A ISGGH+NPAVTFGL +   ++++  + Y VAQ LGA     L+      +Y + G    T   SG ++   +  EI+ TF LVYTV+ +A DPK+ +    +  +AP+ IGF V    LA  P +G  +NPARSFG AV   N   +  +W++WVGP V G LA   Y
Sbjct:   67 LFVGVSMAANISGGHLNPAVTFGLAVGGHITILTGILYWVAQLLGASVACFLL------QYVTHGQAIPTHGVSGISEIEGVVMEIVITFALVYTVYATAADPKKGS----LGTIAPMAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGN---FAGNWVYWVGPLVGGGLAGLVY 231          
BLAST of DC900303 vs. ExPASy Swiss-Prot
Match: TIP11_ORYSJ (Probable aquaporin TIP1-1 OS=Oryza sativa subsp. japonica GN=TIP1-1 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.004e-23
Identity = 68/182 (37.36%), Postives = 99/182 (54.40%), Query Frame = 2
Query:    2 IFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTV--ASGYNKGSALGAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYI 538
            +FV V   A ISGGH+NPAVTFG F+   ++L R + Y +AQ LG+     L++        S GG A      +G +   AL  EI+ TF LVYTV+ +A DPK+ +    +  +AP+ IGF V    L      G  +NPA SFG A++     +W+  W++WVGP +G   A   ++ +
Sbjct:   69 LFVAVSVGANISGGHVNPAVTFGAFVGGNITLFRGLLYWIAQLLGSTVACFLLRF-------STGGLATGTFGLTGVSVWEALVLEIVMTFGLVYTVYATAVDPKKGS----LGTIAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALV---SWSWESQWVYWVGPLIGGGLAGVIYEVL 236          
BLAST of DC900303 vs. ExPASy Swiss-Prot
Match: AQY1_YEAST (Aquaporin-1 OS=Saccharomyces cerevisiae GN=AQY1 PE=1 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 1.004e-23
Identity = 65/175 (37.14%), Postives = 93/175 (53.14%), Query Frame = 2
Query:   14 VYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYI 538
            ++C AG+SGG +NPAV+  L LAR VS  R V   V+Q +  +   G   A    E       AN++  G ++   L  E+ GT +L  TV      KR         +A LPIG ++F+ H+A    TGTG+NPARS GAAV       +  HWI+W+GP +G++ A +  Q +
Sbjct:  106 IWCFAGVSGGALNPAVSLSLCLARAVSPTRCVVMWVSQIVAGMAAGGAASAMTPGEVLF----ANSLGLGCSRTRGLFLEMFGTAILCLTVLMTAVEKRETN-----FMAALPIGISLFIAHVALTAYTGTGVNPARSLGAAVAARYFPHY--HWIYWIGPLLGSILAWSVWQLL 269          
BLAST of DC900303 vs. ExPASy Swiss-Prot
Match: TIP21_ORYSJ (Probable aquaporin TIP2-1 OS=Oryza sativa subsp. japonica GN=TIP2-1 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.712e-23
Identity = 71/177 (40.11%), Postives = 101/177 (57.06%), Query Frame = 2
Query:    2 IFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFV-GALAAAAY 526
            +FV V   A ISGGH+NPAVTFGL +   ++++  + Y +AQ LGA     L+K F+ H       G     +G ++   +  EI+ TF LVYTV+ +A DPK+ +    +  +AP+ IGF V    LA  P +G  +NPARSFG AV   N   +  +W++WVGP + G LA   Y
Sbjct:   67 LFVGVSVAANISGGHLNPAVTFGLAVGGHITILTGLFYWIAQLLGASIACLLLK-FVTHGKAIPTHG----VAGISELEGVVMEIVITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGN---FAGNWVYWVGPLIGGGLAGLVY 231          
BLAST of DC900303 vs. ExPASy Swiss-Prot
Match: MIP_RANPI (Lens fiber major intrinsic protein OS=Rana pipiens PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.712e-23
Identity = 62/177 (35.03%), Postives = 91/177 (51.41%), Query Frame = 2
Query:   11 LVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 541
            +V     +SG HINPAVTF   +  ++SL RA+ Y+ AQ LGA+ G  ++               NT+  G + G A   EI  T   V  +F+  D +R+ R   V     L IGF++ + HL  +  TG  +NPARSF  AV+  N   + +HW++WVGP +G       + +IL
Sbjct:   55 MVQSIGHVSGAHINPAVTFAFLIGSQMSLFRAIFYIAAQLLGAVAGAAVLYGVTPAAIRG-NLALNTLHPGVSLGQATTVEIFLTLQFVLCIFATYDERRNGRLGSV----SLAIGFSLTLGHLFGLYYTGASMNPARSFAPAVLTRN---FTNHWVYWVGPIIGGALGGLVYDFIL 223          
BLAST of DC900303 vs. ExPASy Swiss-Prot
Match: MIP_CAVPO (Lens fiber major intrinsic protein OS=Cavia porcellus GN=MIP PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.712e-23
Identity = 61/177 (34.46%), Postives = 94/177 (53.11%), Query Frame = 2
Query:   11 LVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 541
            LV     ISG H+NPAVTF   +  ++SL+RA  YM AQ LGA+ G  ++ +             NT+ +G +   A   EI  T   V  +F+  D +R+ R   V     L +GF++ + HL  +  TG G+NPARSF  A++  N   + +HW++WVGP +G    +  + ++L
Sbjct:   55 LVQTVGHISGAHVNPAVTFXFLVGSQMSLLRAFCYMAAQLLGAVAGAAVLYSVTPPAVRG-NLALNTLHAGVSVXQATTVEIFLTLQFVLCIFATYDERRNGRLGSV----ALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRN---FTNHWVYWVGPIIGGGLGSLLYDFLL 223          
BLAST of DC900303 vs. ExPASy Swiss-Prot
Match: TIP21_MAIZE (Aquaporin TIP2-1 OS=Zea mays GN=TIP2-1 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.236e-23
Identity = 73/178 (41.01%), Postives = 102/178 (57.30%), Query Frame = 2
Query:    2 IFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVA-SGYNKGSALGAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFV-GALAAAAY 526
            +FV V   A ISGGH+NPAVTFGL +   ++++  V Y VAQ LGA     L+  F+ H     G    T A +G ++   +  E++ TF LVYTV+ +A DPK+ +    +  +AP+ IGF V    LA  P +G  +NPARSFG AV   +   +  +W++WVGP V G LA   Y
Sbjct:   67 LFVGVSVAANISGGHLNPAVTFGLAVGGHITILTGVFYWVAQLLGATVAC-LLLGFVTH-----GKAIPTHAVAGISELEGVVFEVVITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGD---FAGNWVYWVGPLVGGGLAGLVY 231          
BLAST of DC900303 vs. ExPASy Swiss-Prot
Match: TIP11_MAIZE (Aquaporin TIP1-1 OS=Zea mays GN=TIP1-1 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 3.814e-23
Identity = 69/182 (37.91%), Postives = 97/182 (53.30%), Query Frame = 2
Query:    2 IFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTV--ASGYNKGSALGAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYI 538
            +FV V   A ISGGH+NPAVTFG F+   ++L R + Y VAQ LG+     L++        S GG A      +G +   AL  EI+ TF LVYTV+ +A DPK+ +    +  +AP+ IGF V    L      G  +NPA SFG A++      W   W++WVGP +G   A   ++ +
Sbjct:   69 LFVAVSVGANISGGHVNPAVTFGAFVGGNITLFRGLLYWVAQLLGSTVACFLLRF-------STGGQATGTFGLTGVSVWEALVLEIVMTFGLVYTVYATAVDPKKGS----LGTIAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALV---SWEWGYQWVYWVGPLIGGGLAGVIYELL 236          
BLAST of DC900303 vs. ExPASy Swiss-Prot
Match: MIP_HUMAN (Lens fiber major intrinsic protein OS=Homo sapiens GN=MIP PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 4.981e-23
Identity = 60/177 (33.90%), Postives = 93/177 (52.54%), Query Frame = 2
Query:   11 LVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 541
            LV     ISG H+NPAVTF   +  ++SL+RA  YM AQ LGA+ G  ++ +             NT+    + G A   EI  T   V  +F+  D +R+ +   V     L +GF++ + HL  +  TG G+NPARSF  A++  N   + +HW++WVGP +G    +  + ++L
Sbjct:   55 LVQSVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYMAAQLLGAVAGAAVLYSVTPPAVRG-NLALNTLHPAVSVGQATTVEIFLTLQFVLCIFATYDERRNGQLGSV----ALAVGFSLALGHLFGMYYTGAGMNPARSFAPAILTGN---FTNHWVYWVGPIIGGGLGSLLYDFLL 223          
BLAST of DC900303 vs. ExPASy Swiss-Prot
Match: AQY2_YEAST (Aquaporin-2 OS=Saccharomyces cerevisiae GN=AQY2 PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 8.497e-23
Identity = 64/175 (36.57%), Postives = 88/175 (50.29%), Query Frame = 2
Query:   14 VYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYI 538
            ++C AG+SGG +NPAV+  L LAR +S  R V     Q +  +   G   A    +        N +  G ++   L  E+ GT VL  TV      KR         +A LPIG ++FM H+A    TGTG+NPARS GAAV       +  HWI+W+GP +GA  A +  Q +
Sbjct:  105 IWCFAGVSGGALNPAVSLSLCLARAISPARCVVMWFPQIIAGMAAGGAASAMTPGKVLF----TNALGLGCSRSRGLFLEMFGTAVLCLTVLMTAVEKRETN-----FMAALPIGISLFMAHMALTGYTGTGVNPARSLGAAVAARYFPHY--HWIYWIGPLLGAFLAWSVWQLL 268          
The following BLAST results are available for this feature:
BLAST of DC900303 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 193
Match NameE-valueIdentityDescription
TIP23_MAIZE5.884e-2441.01Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2[more]
TIP11_ORYSJ1.004e-2337.36Probable aquaporin TIP1-1 OS=Oryza sativa subsp. j... [more]
AQY1_YEAST1.004e-2337.14Aquaporin-1 OS=Saccharomyces cerevisiae GN=AQY1 PE... [more]
TIP21_ORYSJ1.712e-2340.11Probable aquaporin TIP2-1 OS=Oryza sativa subsp. j... [more]
MIP_RANPI1.712e-2335.03Lens fiber major intrinsic protein OS=Rana pipiens... [more]
MIP_CAVPO1.712e-2334.46Lens fiber major intrinsic protein OS=Cavia porcel... [more]
TIP21_MAIZE2.236e-2341.01Aquaporin TIP2-1 OS=Zea mays GN=TIP2-1 PE=2 SV=1[more]
TIP11_MAIZE3.814e-2337.91Aquaporin TIP1-1 OS=Zea mays GN=TIP1-1 PE=2 SV=1[more]
MIP_HUMAN4.981e-2333.90Lens fiber major intrinsic protein OS=Homo sapiens... [more]
AQY2_YEAST8.497e-2336.57Aquaporin-2 OS=Saccharomyces cerevisiae GN=AQY2 PE... [more]

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Properties
Property NameValue
Genbank descriptionDC900303 VSS Citrus sinensis cDNA clone VS28652 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900303 ID=DC900303; Name=DC900303; organism=Citrus sinensis; type=EST; length=658bp
GATCTTCGTCCTTGTTTACTGCACCGCTGGCATTTCTGGTGGTCACATTA
ACCCTGCTGTGACGTTTGGGCTGTTCTTGGCAAGGAAGGTATCATTGATC
AGGGCTGTGGCTTACATGGTGGCTCAGTGCTTGGGTGCCATTTGCGGTGT
TGGTTTGGTCAAGGCCTTCATGAAGCATGAGTACAACTCACTTGGTGGTG
GTGCTAACACTGTGGCTTCTGGCTACAACAAAGGATCAGCCTTGGGTGCT
GAGATTATTGGTACCTTCGTGCTTGTTTACACAGTCTTCTCGGCCACAGA
CCCCAAGAGAAGCGCTCGTGACTCTCACGTGCCCGTTTTGGCTCCACTTC
CAATTGGATTTGCTGTGTTCATGGTTCACTTGGCCACCATCCCCATCACT
GGAACGGGCATCAACCCTGCTAGGAGCTTTGGTGCTGCTGTTATCTACAA
CAATGACAAGGCCTGGGATGACCATTGGATCTTCTGGGTTGGTCCTTTCG
TTGGAGCATTGGCTGCAGCGGCATACCACCAGTACATCTTGAGGGCTGCT
GCTATCAAGGCTTTGGGATCATTCCGCAGCAACCCTTCAAACTAAGAAAG
CAAATTATGATGAATATGAACCACCAACCAGAATAGCTNTTTCCTTTCTC
TCTTTCTG
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