DC900303

Overview
NameDC900303
Unique NameDC900303
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length658
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900303 vs. ExPASy Swiss-Prot
Match: AQP8_RAT (Aquaporin-8 OS=Rattus norvegicus GN=Aqp8 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.558e-19
Identity = 61/170 (35.88%), Postives = 85/170 (50.00%), Query Frame = 2
Query:   11 LVYCTAG-ISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHE--YNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGAL 511
            L+  T G ISGGH NPAV+  + L   +  +  + Y V+Q  G + G  L K     E  +N+ G     V        ALG EI+ T +LV  V        +  +  +  LAP  IGF+V +  LA   I+G  +NPAR+FG AV+      WD HWI+W+GP +  L
Sbjct:   80 LIIATLGNISGGHFNPAVSLAVTLVGGLKTMLLIPYWVSQLFGGMIGAALAKVVSPEERFWNASGAAFAIVQEQEQVAEALGVEIVMTMLLVLAVCMG-----AVNEKTMGPLAPFSIGFSVIVDILAGGGISGACMNPARAFGPAVMAG---YWDFHWIYWLGPLLAGL 241          
BLAST of DC900303 vs. ExPASy Swiss-Prot
Match: TIP51_ARATH (Probable aquaporin TIP5-1 OS=Arabidopsis thaliana GN=TIP5-1 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.341e-19
Identity = 57/177 (32.20%), Postives = 99/177 (55.93%), Query Frame = 2
Query:   14 VYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPV-LAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 541
            VY +  +SGGH+NPAVTF + +A ++S+  A+ Y  +Q + ++    ++K  +  ++  +      +A       A   E +  FVLVYTVF+A+DP+R      +P+ + P+ IGF      LA  P +G  +NPA +FG+A++Y + K   +  ++WVGP +G   AA  +  ++
Sbjct:   75 VYISWNVSGGHVNPAVTFAMAVAGRISVPTAMFYWTSQMIASVMACLVLKVTVMEQHVPI----YKIAGEMTGFGASVLEGVLAFVLVYTVFTASDPRRG-----LPLAVGPIFIGFVAGANVLAAGPFSGGSMNPACAFGSAMVYGSFK---NQAVYWVGPLLGGATAALVYDNVV 239          
BLAST of DC900303 vs. ExPASy Swiss-Prot
Match: AQPZ_SHIFL (Aquaporin Z OS=Shigella flexneri GN=aqpZ PE=3 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 4.364e-19
Identity = 58/183 (31.69%), Postives = 87/183 (47.54%), Query Frame = 2
Query:    2 IFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSA--TDPKRSARDSHVPV-LAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 541
            +  + +    ISGGH NPAVT GL+   +      V Y++AQ +G I    L+      +       +   ++GY + S  G  ++   V V  V SA        A D   P   AP+ IG A+ ++HL +IP+T T +NPARS  A  I+    A +  W FWV P VG +     ++ +L
Sbjct:   47 VLTMAFAVGHISGGHFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPGGYSMLSALV-VELVLSAGFLLVIHGATDKFAPAGFAPIAIGLALTLIHLISIPVTNTSVNPARS-TAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLL 227          
BLAST of DC900303 vs. ExPASy Swiss-Prot
Match: AQPZ_ECOLI (Aquaporin Z OS=Escherichia coli (strain K12) GN=aqpZ PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.364e-19
Identity = 58/183 (31.69%), Postives = 87/183 (47.54%), Query Frame = 2
Query:    2 IFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSA--TDPKRSARDSHVPV-LAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 541
            +  + +    ISGGH NPAVT GL+   +      V Y++AQ +G I    L+      +       +   ++GY + S  G  ++   V V  V SA        A D   P   AP+ IG A+ ++HL +IP+T T +NPARS  A  I+    A +  W FWV P VG +     ++ +L
Sbjct:   47 VLTMAFAVGHISGGHFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPGGYSMLSALV-VELVLSAGFLLVIHGATDKFAPAGFAPIAIGLALTLIHLISIPVTNTSVNPARS-TAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLL 227          
BLAST of DC900303 vs. ExPASy Swiss-Prot
Match: AQPZ_ECOL6 (Aquaporin Z OS=Escherichia coli O6 GN=aqpZ PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.364e-19
Identity = 58/183 (31.69%), Postives = 87/183 (47.54%), Query Frame = 2
Query:    2 IFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSA--TDPKRSARDSHVPV-LAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 541
            +  + +    ISGGH NPAVT GL+   +      V Y++AQ +G I    L+      +       +   ++GY + S  G  ++   V V  V SA        A D   P   AP+ IG A+ ++HL +IP+T T +NPARS  A  I+    A +  W FWV P VG +     ++ +L
Sbjct:   47 VLTMAFAVGHISGGHFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPGGYSMLSALV-VELVLSAGFLLVIHGATDKFAPAGFAPIAIGLALTLIHLISIPVTNTSVNPARS-TAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLL 227          
BLAST of DC900303 vs. ExPASy Swiss-Prot
Match: AQPZ_ECO57 (Aquaporin Z OS=Escherichia coli O157:H7 GN=aqpZ PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.364e-19
Identity = 58/183 (31.69%), Postives = 87/183 (47.54%), Query Frame = 2
Query:    2 IFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSA--TDPKRSARDSHVPV-LAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 541
            +  + +    ISGGH NPAVT GL+   +      V Y++AQ +G I    L+      +       +   ++GY + S  G  ++   V V  V SA        A D   P   AP+ IG A+ ++HL +IP+T T +NPARS  A  I+    A +  W FWV P VG +     ++ +L
Sbjct:   47 VLTMAFAVGHISGGHFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPGGYSMLSALV-VELVLSAGFLLVIHGATDKFAPAGFAPIAIGLALTLIHLISIPVTNTSVNPARS-TAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLL 227          
BLAST of DC900303 vs. ExPASy Swiss-Prot
Match: TIP42_ORYSJ (Probable aquaporin TIP4-2 OS=Oryza sativa subsp. japonica GN=TIP4-2 PE=2 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 5.699e-19
Identity = 66/183 (36.07%), Postives = 91/183 (49.73%), Query Frame = 2
Query:    2 IFVLVYCTAG--ISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANT----VASGYNKGSALGAEIIGTFVLVYTVFSA-TDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGA-LAAAAY 526
            + V V  TAG  +SGGH+NPAVT  L +   ++L R+  Y+ AQ  G+     L++         L GGA T    +A G      + AE + TF L+  + +   DP+R+A     P   PL  G  V    +A   +TG  +NPARSFG A+       W  HW++WVGP  G  LA  AY
Sbjct:   69 LVVAVLATAGFHVSGGHLNPAVTLSLAVGGHITLFRSALYVAAQLAGSSLACLLLRC--------LTGGAATPVHALADGVGPVQGVAAEAVFTFTLLLVICATILDPRRAA----PPGTGPLLTGLLVGANTVAGGALTGASMNPARSFGPALATGE---WAHHWVYWVGPLAGGPLAVVAY 236          
BLAST of DC900303 vs. ExPASy Swiss-Prot
Match: TIP43_MAIZE (Aquaporin TIP4-3 OS=Zea mays GN=TIP4-3 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 7.444e-19
Identity = 62/187 (33.16%), Postives = 91/187 (48.66%), Query Frame = 2
Query:    2 IFVLVYCTAG--ISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSA-TDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRAAA 553
            + V V  TAG  ISGGH+NPAVT  L +   V+L R+  Y+ AQ L +     L++         L    + +A G      + AE + TF L++ +++   DP++      +P   PL  G  V    +A   ++G  +NPARSFG AV       W  HW++WVGP  G   A   ++    AAA
Sbjct:   64 LVVAVIATAGFHISGGHVNPAVTLSLAVGGHVTLFRSSLYIAAQMLASSAACFLLRWLT----GGLATPVHALAEGVGPLQGVVAEAVFTFSLLFVIYATILDPRKL-----LPGAGPLLTGLLVGANSVAGAALSGASMNPARSFGPAVA---SGVWTHHWVYWVGPLAGGPLAVLVYECCFMAAA 238          
BLAST of DC900303 vs. ExPASy Swiss-Prot
Match: AQP8_NOTAL (Aquaporin-8 OS=Notomys alexis GN=AQP8 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 7.444e-19
Identity = 60/170 (35.29%), Postives = 85/170 (50.00%), Query Frame = 2
Query:   11 LVYCTAG-ISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHE--YNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGAL 511
            L+  T G ISGGH NPAV+  + +   +  +  + Y ++Q  G + G  L K     E  +N+ G     V        ALG EII T +LV  V        +  +  +  LAP  IGF+V +  LA   I+G  +NPAR+FG AV+      WD HWI+W+GP +  L
Sbjct:   78 LIIATLGNISGGHFNPAVSLAVTVIGGLKTMLLIPYWISQIFGGLIGAALAKVVSPEERFWNASGAAFAIVQEQEQVTEALGVEIILTILLVLAVCMG-----AVNEKTMGPLAPFSIGFSVIVDILAGGGISGACMNPARAFGPAVVAG---YWDFHWIYWLGPLLAGL 239          
BLAST of DC900303 vs. ExPASy Swiss-Prot
Match: AQP8_MOUSE (Aquaporin-8 OS=Mus musculus GN=Aqp8 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 7.444e-19
Identity = 60/170 (35.29%), Postives = 85/170 (50.00%), Query Frame = 2
Query:   11 LVYCTAG-ISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHE--YNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGAL 511
            L+  T G ISGGH NPAV+  + +   +  +  + Y ++Q  G + G  L K     E  +N+ G     V        ALG EII T +LV  V        +  +  +  LAP  IGF+V +  LA   I+G  +NPAR+FG AV+      WD HWI+W+GP +  L
Sbjct:   78 LIIATLGNISGGHFNPAVSLAVTVIGGLKTMLLIPYWISQLFGGLIGAALAKVVSPEERFWNASGAAFAIVQEQEQVAEALGIEIILTMLLVLAVCMG-----AVNEKTMGPLAPFSIGFSVIVDILAGGSISGACMNPARAFGPAVMAG---YWDFHWIYWLGPLLAGL 239          
The following BLAST results are available for this feature:
BLAST of DC900303 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 193
Match NameE-valueIdentityDescription
AQP8_RAT2.558e-1935.88Aquaporin-8 OS=Rattus norvegicus GN=Aqp8 PE=2 SV=1[more]
TIP51_ARATH3.341e-1932.20Probable aquaporin TIP5-1 OS=Arabidopsis thaliana ... [more]
AQPZ_SHIFL4.364e-1931.69Aquaporin Z OS=Shigella flexneri GN=aqpZ PE=3 SV=2[more]
AQPZ_ECOLI4.364e-1931.69Aquaporin Z OS=Escherichia coli (strain K12) GN=aq... [more]
AQPZ_ECOL64.364e-1931.69Aquaporin Z OS=Escherichia coli O6 GN=aqpZ PE=3 SV... [more]
AQPZ_ECO574.364e-1931.69Aquaporin Z OS=Escherichia coli O157:H7 GN=aqpZ PE... [more]
TIP42_ORYSJ5.699e-1936.07Probable aquaporin TIP4-2 OS=Oryza sativa subsp. j... [more]
TIP43_MAIZE7.444e-1933.16Aquaporin TIP4-3 OS=Zea mays GN=TIP4-3 PE=2 SV=1[more]
AQP8_NOTAL7.444e-1935.29Aquaporin-8 OS=Notomys alexis GN=AQP8 PE=2 SV=1[more]
AQP8_MOUSE7.444e-1935.29Aquaporin-8 OS=Mus musculus GN=Aqp8 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionDC900303 VSS Citrus sinensis cDNA clone VS28652 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900303 ID=DC900303; Name=DC900303; organism=Citrus sinensis; type=EST; length=658bp
GATCTTCGTCCTTGTTTACTGCACCGCTGGCATTTCTGGTGGTCACATTA
ACCCTGCTGTGACGTTTGGGCTGTTCTTGGCAAGGAAGGTATCATTGATC
AGGGCTGTGGCTTACATGGTGGCTCAGTGCTTGGGTGCCATTTGCGGTGT
TGGTTTGGTCAAGGCCTTCATGAAGCATGAGTACAACTCACTTGGTGGTG
GTGCTAACACTGTGGCTTCTGGCTACAACAAAGGATCAGCCTTGGGTGCT
GAGATTATTGGTACCTTCGTGCTTGTTTACACAGTCTTCTCGGCCACAGA
CCCCAAGAGAAGCGCTCGTGACTCTCACGTGCCCGTTTTGGCTCCACTTC
CAATTGGATTTGCTGTGTTCATGGTTCACTTGGCCACCATCCCCATCACT
GGAACGGGCATCAACCCTGCTAGGAGCTTTGGTGCTGCTGTTATCTACAA
CAATGACAAGGCCTGGGATGACCATTGGATCTTCTGGGTTGGTCCTTTCG
TTGGAGCATTGGCTGCAGCGGCATACCACCAGTACATCTTGAGGGCTGCT
GCTATCAAGGCTTTGGGATCATTCCGCAGCAACCCTTCAAACTAAGAAAG
CAAATTATGATGAATATGAACCACCAACCAGAATAGCTNTTTCCTTTCTC
TCTTTCTG
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