DC900303
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900303 vs. ExPASy Swiss-Prot
Match: TIP41_MAIZE (Aquaporin TIP4-1 OS=Zea mays GN=TIP4-1 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.270e-18 Identity = 65/184 (35.33%), Postives = 91/184 (49.46%), Query Frame = 2 Query: 14 VYCTAG--ISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKG----SALGAEIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGA-LAAAAYHQYIL 541 V TAG +SGGH+NPAVT GL + ++ +RAV Y+ AQ L + L++ L GG T +G L E+I TF L++ ++ DP+ S V + PL G V LA TG +NPARSFG A+ + W +HW++W+GP +G LA Y L Sbjct: 75 VLVTAGFHVSGGHLNPAVTVGLMVRGHITKLRAVLYVAAQLLASSAACVLLR--------FLSGGMVTPVHALGRGISPMQGLVMEVILTFSLLFVTYAMILDPR-----SQVRAIGPLLTGLIVGANSLAGGNFTGASMNPARSFGPALATGD---WTNHWVYWIGPLLGGPLAGFVYESLFL 242
BLAST of DC900303 vs. ExPASy Swiss-Prot
Match: NO26_SOYBN (Nodulin-26 OS=Glycine max PE=1 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 2.829e-18 Identity = 60/171 (35.09%), Postives = 86/171 (50.29%), Query Frame = 2 Query: 8 VLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAA 520 VLVY ISGGH NPAVT R+ LI+ AY+VAQ LG+I G ++ ++ G TV +G N A E I TF L++ + R+ V A + IG + + + P+TG +NPARS G A ++ ++ WI+ + P VGA+A A Sbjct: 83 VLVYTVGHISGGHFNPAVTIAFASTRRFPLIQVPAYVVAQLLGSILASGTLRLLFMGNHDQFSG---TVPNGTNL-QAFVFEFIMTFFLMFVICGVATDNRA-----VGEFAGIAIGSTLLLNVIIGGPVTGASMNPARSLGPAFVHGE---YEGIWIYLLAPVVGAIAGA 241
BLAST of DC900303 vs. ExPASy Swiss-Prot
Match: AQPZ_BRAJA (Aquaporin Z OS=Bradyrhizobium japonicum GN=aqpZ PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 3.694e-18 Identity = 56/192 (29.17%), Postives = 90/192 (46.88%), Query Frame = 2 Query: 2 IFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAIC-------------GVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYI 538 + + Y ISG H+NPAVT GL + + + Y++AQ GAI G + K F + Y++ G Y+ + E++ T + ++ + AT + A APL IG A+ M+HL +IP+T T +NPARS G A ++ A W+FWV P +G ++++ Sbjct: 48 VVTMAYAIGHISGCHLNPAVTVGLAAGGRFPAGQILPYVIAQVCGAIVAAELLYIIASGAPGFDVTKGFASNGYDAHSPGQ------YSMMACFLTEVVMTMMFLFIIMGATHGRAPAG------FAPLAIGLALVMIHLVSIPVTNTSVNPARSTGPA-LFVGGWAMAQLWLFWVAPLIGGALGGVIYRWL 226
BLAST of DC900303 vs. ExPASy Swiss-Prot
Match: TIP41_ORYSJ (Probable aquaporin TIP4-1 OS=Oryza sativa subsp. japonica GN=TIP4-1 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 4.825e-18 Identity = 62/180 (34.44%), Postives = 87/180 (48.33%), Query Frame = 2 Query: 14 VYCTAG--ISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSA-TDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGA-LAAAAYHQYIL 541 V TAG +SGGH+NPAVT L ++ R+ Y+ AQ L + L +++ + +T+ SG L EII TF L++ V++ DP+ S VP PL G V +A +G +NPARSFG A+ W HWI+W+GP +G LA Y L Sbjct: 71 VLVTAGFHVSGGHLNPAVTVALLARGHITAFRSALYVAAQLLAS----SLACILLRYLTGGMATPVHTLGSGIGPMQGLVMEIILTFSLLFVVYATILDPR-----SSVPGFGPLLTGLIVGANTIAGGNFSGASMNPARSFGPALATG---VWTHHWIYWLGPLIGGPLAGLVYESLFL 238
BLAST of DC900303 vs. ExPASy Swiss-Prot
Match: AQPM_METTM (Aquaporin aqpM OS=Methanobacterium thermoautotrophicum (strain Marburg / DSM 2133) GN=aqpM PE=1 SV=3) HSP 1 Score: 91.2781 bits (225), Expect = 4.825e-18 Identity = 60/179 (33.52%), Postives = 93/179 (51.96%), Query Frame = 2 Query: 14 VYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGG-GANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGA---AVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYI 538 +Y ISG HINPAVT GL+ +K V Y++AQ LGA G + ++GG GA G + A+ AE++GTF+L+ T+ +R+ + A + IG V + I+G+ +NPAR+FG +I+ W+ + I+ +GP VGA+ AA +QY+ Sbjct: 70 IYALGNISGCHINPAVTIGLWSVKKFPGREVVPYIIAQLLGAAFGSFIFLQCAGIGAATVGGLGATAPFPGISYWQAMLAEVVGTFLLMITIMGIAVDERAPKG-----FAGIIIGLTVAGIITTLGNISGSSLNPARTFGPYLNDMIFAGTDLWNYYSIYVIGPIVGAVLAALTYQYL 243
BLAST of DC900303 vs. ExPASy Swiss-Prot
Match: TIP51_ORYSJ (Probable aquaporin TIP5-1 OS=Oryza sativa subsp. japonica GN=TIP5;1 PE=2 SV=3) HSP 1 Score: 90.1225 bits (222), Expect = 1.075e-17 Identity = 61/189 (32.28%), Postives = 91/189 (48.15%), Query Frame = 2 Query: 2 IFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTV-----ASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSA----RDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 541 +F V+ A +SGGH+NPAVTF + +++ A+ Y +Q LG+ A + Y S G T +G+ G G + TF++VYTV A DP+ + L L +G LA +TG +NPARSFG AV+ + + + ++W GP VGA AA HQ ++ Sbjct: 66 LFAAVFIAADVSGGHVNPAVTFAYAIGGHITVPSAIFYWASQMLGS------TFACLVLHYISAGQAVPTTRIAVEMTGFGAGILEG---VLTFMVVYTVHVAGDPRGGGFGGRKGPAATALGALVVGAVTGACVLAAGSLTGASMNPARSFGPAVVSGH---YSNQAVYWAGPMVGAAVAALVHQALV 242
BLAST of DC900303 vs. ExPASy Swiss-Prot
Match: TIP42_MAIZE (Aquaporin TIP4-2 OS=Zea mays GN=TIP4-2 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.075e-17 Identity = 58/180 (32.22%), Postives = 91/180 (50.56%), Query Frame = 2 Query: 14 VYCTAG--ISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFV-GALAAAAYHQYIL 541 V TAG +SGGH+NPAVT G+ + ++ +RA+ Y+ AQ L + L +++ + + + +G L E+I TF L++ ++ DP+ S V + PL G V LA TG +NPARSFG A+ W +HW++W+GP + G+LA Y + Sbjct: 77 VLVTAGFHVSGGHLNPAVTVGILVRGHITKLRALLYVAAQLLAS----SLACILLRYLSGGMVTPVHALGAGIRPMQGLVMEVILTFSLLFVTYAMILDPR-----SQVRTIGPLLTGLIVGANSLAGGNFTGASMNPARSFGPAMATG---VWTNHWVYWIGPLLGGSLAGFVYESLFM 244
BLAST of DC900303 vs. ExPASy Swiss-Prot
Match: AQPM_ARCFU (Probable aquaporin aqpM OS=Archaeoglobus fulgidus GN=aqpM PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 6.967e-17 Identity = 65/187 (34.76%), Postives = 90/187 (48.13%), Query Frame = 2 Query: 2 IFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGG-GANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNND-----KAWDDHWIFWVGPFVGALAAAAYHQYILR 544 I ++Y ISG HINPAVT L+ + V Y+VAQ +GA G L A + ++GG GA G G A+ E IGTF+L+ + +R+ P A L IG V + ITG+ +NPAR+FG Y D W I+ +GP VGA+AAA + Y+ + Sbjct: 67 IAAVIYSLGRISGAHINPAVTIALWSIGRFPGREVVPYIVAQFIGAALGSLLFLACVGPAAATVGGLGATAPFPGIGYGQAILTEAIGTFLLMLVIMGVAVDERAP-----PGFAGLVIGLTVGGIITTIGNITGSSLNPARTFGP---YLGDSLMGINLWQYFPIYVIGPIVGAVAAAWLYNYLAK 245
BLAST of DC900303 vs. ExPASy Swiss-Prot
Match: AQPM_METTH (Aquaporin aqpM OS=Methanobacterium thermoautotrophicum GN=aqpM PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.188e-16 Identity = 59/179 (32.96%), Postives = 89/179 (49.72%), Query Frame = 2 Query: 14 VYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGG-GANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGA---AVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYI 538 +Y ISG HINPAVT GL+ +K V Y++AQ LGA + ++GG GA G A+ AE +GTF+L+ T+ +R+ + A + IG V + ITG+ +NPAR+FG +++ W+ I+ +GP VGA+ AA +QY+ Sbjct: 70 IYALGNISGCHINPAVTIGLWSVKKFPGRDVVPYIIAQLLGAAFASFIFLQCAGITAATIGGLGATAPFPGIGYWQAMLAETVGTFLLMITIMGIAVDERAPKG-----FAGIIIGLTVAGIITTIGNITGSSLNPARTFGPYLNDMVFAGTNLWNYFPIYVIGPVVGAVLAALTYQYL 243
BLAST of DC900303 vs. ExPASy Swiss-Prot
Match: NIP23_MAIZE (Aquaporin NIP2-3 OS=Zea mays GN=NIP2-3 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.516e-16 Identity = 58/179 (32.40%), Postives = 89/179 (49.72%), Query Frame = 2 Query: 2 IFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYI 538 + V++Y T ISG H+NPAVT R I+ Y AQ GA+C ++KA ++ + T SG + AL EI+ TF +++ + R+ V LA L +G AV + + P++G +NPAR+ AV N + WI+++GP VG L+ A + YI Sbjct: 98 VTVMIYATGHISGAHMNPAVTLSFACFRHFPWIQVPFYWAAQFTGAMCAAFVLKAVLQ----PIAVIGTTTPSGPH-WHALAIEIVVTFNMMFVTCAVATDSRA-----VGELAGLAVGSAVCITSIFAGPVSGGSMNPARTLAPAVASN---VFTGLWIYFLGPVVGTLSGAWVYTYI 263 The following BLAST results are available for this feature:
BLAST of DC900303 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 193
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900303 ID=DC900303; Name=DC900303; organism=Citrus sinensis; type=EST; length=658bpback to top |