DC900303
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900303 vs. ExPASy Swiss-Prot
Match: GLPF_ECOLI (Glycerol uptake facilitator protein OS=Escherichia coli (strain K12) GN=glpF PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.319e-12 Identity = 61/214 (28.50%), Postives = 91/214 (42.52%), Query Frame = 2 Query: 2 IFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKH----------------EYNSLGGGANTVASGY-NKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHW---------------IFWVGPFVGALAAA-AYHQYILR 544 + + +Y TAG+SG H+NPAVT L+L + + ++V+Q GA C LV + E L G +T + + N A E++ T +L+ + + TD LAPL IG + ++ + P+TG +NPAR FG V AW W + GP VGA+ A AY + I R Sbjct: 52 VAMAIYLTAGVSGAHLNPAVTIALWLFACFDKRKVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITAILMGLILALTDDGNGVPRG---PLAPLLIGLLIAVIGASMGPLTGFAMNPARDFGPKVF-----AWLAGWGNVAFTGGRDIPYFLVPLFGPIVGAIVGAFAYRKLIGR 257
BLAST of DC900303 vs. ExPASy Swiss-Prot
Match: GLPF_ECOL6 (Glycerol uptake facilitator protein OS=Escherichia coli O6 GN=glpF PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.319e-12 Identity = 61/214 (28.50%), Postives = 91/214 (42.52%), Query Frame = 2 Query: 2 IFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKH----------------EYNSLGGGANTVASGY-NKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHW---------------IFWVGPFVGALAAA-AYHQYILR 544 + + +Y TAG+SG H+NPAVT L+L + + ++V+Q GA C LV + E L G +T + + N A E++ T +L+ + + TD LAPL IG + ++ + P+TG +NPAR FG V AW W + GP VGA+ A AY + I R Sbjct: 52 VAMAIYLTAGVSGAHLNPAVTIALWLFACFDKRKVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITAILMGLILALTDDGNGVPRG---PLAPLLIGLLIAVIGASMGPLTGFAMNPARDFGPKVF-----AWLAGWGNVAFTGGRDIPYFLVPLFGPIVGAIVGAFAYRKLIGR 257
BLAST of DC900303 vs. ExPASy Swiss-Prot
Match: GLPF_ECO57 (Glycerol uptake facilitator protein OS=Escherichia coli O157:H7 GN=glpF PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.319e-12 Identity = 61/214 (28.50%), Postives = 91/214 (42.52%), Query Frame = 2 Query: 2 IFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKH----------------EYNSLGGGANTVASGY-NKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHW---------------IFWVGPFVGALAAA-AYHQYILR 544 + + +Y TAG+SG H+NPAVT L+L + + ++V+Q GA C LV + E L G +T + + N A E++ T +L+ + + TD LAPL IG + ++ + P+TG +NPAR FG V AW W + GP VGA+ A AY + I R Sbjct: 52 VAMAIYLTAGVSGAHLNPAVTIALWLFACFDKRKVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITAILMGLILALTDDGNGVPRG---PLAPLLIGLLIAVIGASMGPLTGFAMNPARDFGPKVF-----AWLAGWGNVAFTGGRDIPYFLVPLFGPIVGAIVGAFAYRKLIGR 257
BLAST of DC900303 vs. ExPASy Swiss-Prot
Match: NIP41_ARATH (Putative aquaporin NIP4-1 OS=Arabidopsis thaliana GN=NIP4-1 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.167e-12 Identity = 48/179 (26.82%), Postives = 82/179 (45.81%), Query Frame = 2 Query: 2 IFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYI 538 + V++Y T ISG H NPAVT + R+ + Y+ AQ G++ ++ K + G + AL AEII +F+L++ + R+ V LA + +G + + PI+G +NPARS G A++ + W++ VGP +G ++ + I Sbjct: 86 VMVMIYSTGHISGAHFNPAVTVTFAIFRRFPWHQVPLYIGAQFAGSLLASLTLRLMFKVTPEAFFG----TTPADSPARALVAEIIISFLLMFVISGVATDNRA-----VGELAGIAVGMTIMVNVFVAGPISGASMNPARSLGPALVMG---VYKHIWVYIVGPVLGVISGGFVYNLI 252
BLAST of DC900303 vs. ExPASy Swiss-Prot
Match: YFF4_YEAST (Uncharacterized membrane protein YFL054C OS=Saccharomyces cerevisiae GN=YFL054C PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 8.813e-12 Identity = 62/200 (31.00%), Postives = 84/200 (42.00%), Query Frame = 2 Query: 14 VYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGAN--TVASG----------YNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPV---LAPLPIGFAVFMVHLATIPITGTGINPARSFG----AAVIYNNDKA-----WDDHWIFWVGPFVGALAAAAYHQYIL 541 VY GISGGHINPAVT + + RK + Y+VAQ +GA G + + GG + T A+G +A E IG +LV + + D DS+ P + L IGF V + +A T INPAR G A++I A W W W GP G +A A + + Sbjct: 396 VYVAGGISGGHINPAVTISMAIFRKFPWKKVPVYIVAQIIGAYFGGAMAYGYFWSSITEFEGGPHIRTTATGACLFTDPKSYVTWRNAFFDEFIGASILVGCLMALLD------DSNAPPGNGMTALIIGFLVAAIGMALGYQTSFTINPARDLGPRIFASMIGYGPHAFHLTHWWWTWGAWGGPIAGGIAGALIYDIFI 589
BLAST of DC900303 vs. ExPASy Swiss-Prot
Match: GLPF_SHIFL (Glycerol uptake facilitator protein OS=Shigella flexneri GN=glpF PE=3 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 8.813e-12 Identity = 61/214 (28.50%), Postives = 92/214 (42.99%), Query Frame = 2 Query: 2 IFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKH----------------EYNSLGGGANTVASGY-NKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHW--IFWVG-------------PFVGALAAA-AYHQYILR 544 + + +Y TAG+SG H+NPAVT L+L + + ++V+Q GA C LV + E L G +T + + N A E++ T +L+ + + TD LAPL IG + ++ + P+TG +NPAR FG V AW W + + G P VGA+ A AY + I R Sbjct: 52 VAMAIYLTAGVSGAHLNPAVTIALWLFACFDKRKVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITAILMGLILALTDDGNGVPRG---PLAPLLIGLLIAVIGASMGPLTGFAMNPARDFGPKVF-----AWLAGWGNVAFTGGRDIPYFLVPLFSPIVGAIVGAFAYRKLIGR 257
BLAST of DC900303 vs. ExPASy Swiss-Prot
Match: GLPF_STRPN (Glycerol uptake facilitator protein OS=Streptococcus pneumoniae GN=glpF PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.151e-11 Identity = 55/186 (29.57%), Postives = 87/186 (46.77%), Query Frame = 2 Query: 2 IFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSA-------LGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYN-------NDKAWDDHWIFWVGPFVGALAA 517 + V V+ + +S ++NPAVT G+ L + + Y++AQ GA+ G LV K Y + N +A+ ++ G A L +EI+GTFVLV T+F+ A + +G + + L+ TG +NPAR G ++++ D W WI VGP +GA A Sbjct: 49 VAVAVFVSGKLSPAYLNPAVTIGVALKGGLPWASVLPYILAQFAGAMLGQILVWLQFKPHYEAEENAGNILAT-FSTGPAIKDTVSNLISEILGTFVLVLTIFALGLYDFQAG------IGTFAVGTLIVGIGLSLGGTTGYALNPARDLGPRIMHSILPIPNKGDGDWSYAWIPVVGPVIGAALA 227
BLAST of DC900303 vs. ExPASy Swiss-Prot
Match: SIP12_MAIZE (Aquaporin SIP1-2 OS=Zea mays GN=SIP1-2 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.503e-11 Identity = 44/175 (25.14%), Postives = 73/175 (41.71%), Query Frame = 2 Query: 2 IFVLVYCTAGISGGHINPAVTFGLFLA--RKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAA 520 +FV + G NP + A SL + AQ GA+ G + M +Y + GG + + + GAE++ TFV+ V + P++ I + L+ TG +NPA +FG A + N W+ +++W+ PF+GA+ AA Sbjct: 58 LFVFNILCDALGGASFNPTGVAAFYAAGVTSPSLFSIALRLPAQAAGAVGGALAISELMPAQYRHMLGGPSLKVDPH---TGAGAELVLTFVITLAVLLII-----VKGPRNPIIKTWMISICTLCLVLSGAAYTGPSMNPANAFGWAYVNNRHNTWEQFYVYWICPFIGAILAA 224
BLAST of DC900303 vs. ExPASy Swiss-Prot
Match: GLPF_HAEIN (Glycerol uptake facilitator protein OS=Haemophilus influenzae GN=glpF PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.963e-11 Identity = 50/161 (31.06%), Postives = 74/161 (45.96%), Query Frame = 2 Query: 2 IFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKH----------------EYNSLGGGANTVA-SGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFG 433 + + VY TAG+SG H+NPAVT L+ + + Y+++Q LGA LV A ++ E SL G +T + G A E + T +L+ + + TD LAPL IG + ++ A P+TG +NPAR FG Sbjct: 50 VALAVYATAGLSGAHLNPAVTIALWKFACFDGKKVIPYIISQMLGAFFAAALVYALYRNVFIDYETVHNIVRGTQESLSLAGTFSTYPHPSLSIGGAFAVEFVITAILMALIMALTDDGNGVPRG---PLAPLLIGILIAVIGGAMGPLTGFAMNPARDFG 207
BLAST of DC900303 vs. ExPASy Swiss-Prot
Match: NIP61_ARATH (Aquaporin NIP6-1 OS=Arabidopsis thaliana GN=NIP6-1 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.564e-11 Identity = 48/179 (26.82%), Postives = 81/179 (45.25%), Query Frame = 2 Query: 2 IFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYI 538 + +++ T ISG H+NPAVT + Y+ AQ + ++ +KA + ++ GG G ++ AL E I +F L++ V + R+ V LA + +G V + L P T +NP R+ G A+ NN +A W++ P +GAL A + + Sbjct: 123 VMIVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQVMASVSAAFALKAVFE---PTMSGGVTVPTVGLSQAFAL--EFIISFNLMFVVTAVATDTRA-----VGELAGIAVGATVMLNILIAGPATSASMNPVRTLGPAIAANNYRA---IWVYLTAPILGALIGAGTYTIV 288 The following BLAST results are available for this feature:
BLAST of DC900303 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 193
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900303 ID=DC900303; Name=DC900303; organism=Citrus sinensis; type=EST; length=658bpback to top |