DC900303
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900303 vs. ExPASy Swiss-Prot
Match: TIP1_MEDSA (Probable aquaporin TIP-type OS=Medicago sativa GN=MCP1 PE=2 SV=2) HSP 1 Score: 116.316 bits (290), Expect = 1.401e-25 Identity = 68/180 (37.78%), Postives = 101/180 (56.11%), Query Frame = 2 Query: 2 IFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYI 538 +FV V A ISGGH+NPAV FG F+ ++L+R + Y++AQ LG+I L+ + G ++ G G AL EI+ TF LVYTV++ A DPK+ ++ ++AP+ IGF V L TG +NPA SFG AV+ +W +HW++W GP +G A ++ + Sbjct: 69 LFVAVSVGANISGGHVNPAV-FGAFVGGNITLLRGIVYIIAQLLGSIVCSALLVFVTASSVPAFG-----LSEGVGVGPALVLEIVMTFGLVYTVYATAVDPKKG----NIGIIAPIAIGFIVGANILVGGAFTGASMNPAVSFGPAVV---SWSWSNHWVYWAGPLIGGGIAGLVYEVL 235
BLAST of DC900303 vs. ExPASy Swiss-Prot
Match: TIP22_ORYSJ (Probable aquaporin TIP2-2 OS=Oryza sativa subsp. japonica GN=TIP2-2 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.829e-25 Identity = 74/180 (41.11%), Postives = 101/180 (56.11%), Query Frame = 2 Query: 2 IFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYI 538 +FV V A ISGGH+NPAVTFGL L +++++ V Y +AQ LGAI G LV+ + G SG + EII TF LVYTV+ +A DPK+ + + +AP+ IGF V L P +G +NPARSFG AV + + + WI+WVGP VG A ++Y+ Sbjct: 68 LFVAVAIGANISGGHVNPAVTFGLALGGQITILTGVFYWIAQLLGAIVGAVLVQFCTGVATPTHG------LSGVGAFEGVVMEIIVTFGLVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILVAGPFSGGSMNPARSFGPAVASGD---YTNIWIYWVGPLVGGGLAGLVYRYV 234
BLAST of DC900303 vs. ExPASy Swiss-Prot
Match: MIP_BOVIN (Lens fiber major intrinsic protein OS=Bos taurus GN=MIP PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.389e-25 Identity = 64/177 (36.16%), Postives = 97/177 (54.80%), Query Frame = 2 Query: 11 LVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 541 LV ISG H+NPAVTF + ++SL+RA+ YMVAQ LGA+ G ++ + NT+ G + G A EI T V +F+ D +R+ R V L +GF++ + HL + TG G+NPARSF A++ N + +HW++WVGP +GA + + ++L Sbjct: 55 LVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPPAVRG-NLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSV----ALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRN---FTNHWVYWVGPVIGAGLGSLLYDFLL 223
BLAST of DC900303 vs. ExPASy Swiss-Prot
Match: MIP_RABIT (Lens fiber major intrinsic protein OS=Oryctolagus cuniculus GN=MIP PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.120e-25 Identity = 63/177 (35.59%), Postives = 96/177 (54.24%), Query Frame = 2 Query: 11 LVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 541 LV ISG H+NPAVTF + ++SL+RA+ YM AQ LGA+ G ++ + NT+ G + G A EI T V +F+ D +R+ R V L +GF++ + HL + TG G+NPARSF A++ N + +HW++WVGP +G A+ + ++L Sbjct: 55 LVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYMAAQLLGAVAGAAVLYSVTPAAVRG-NLALNTLHPGVSLGQATTVEIFLTLQFVLCIFATYDERRNGRLGSV----ALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRN---FTNHWVYWVGPIIGGGLASLLYDFLL 223
BLAST of DC900303 vs. ExPASy Swiss-Prot
Match: AQP2_BOVIN (Aquaporin-2 OS=Bos taurus GN=AQP2 PE=2 SV=2) HSP 1 Score: 115.161 bits (287), Expect = 3.120e-25 Identity = 71/184 (38.59%), Postives = 100/184 (54.35%), Query Frame = 2 Query: 2 IFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYN--SLGG--GANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 541 I LV +SG HINPAVT + VS +RAV Y+ AQ LGA+ G L+ HE ++ G N + + G A+ E+ T LV +F++TD +R +V A L IGF+V + HL I TG +NPARS A++ +DDHW+FW+GP VGA+ A+ + Y+L Sbjct: 52 IGTLVQALGHVSGAHINPAVTVACLVGCHVSFLRAVFYVAAQLLGAVAGAALL-----HEITPPAIRGDLAVNALNNNSTAGQAVTVELFLTLQLVLCIFASTDERRG---DNVGTPA-LSIGFSVALGHLLGIHYTGCSMNPARSLAPAIVTGK---FDDHWVFWIGPLVGAIVASLLYNYVL 223
BLAST of DC900303 vs. ExPASy Swiss-Prot
Match: TIP12_ARATH (Aquaporin TIP1-2 OS=Arabidopsis thaliana GN=TIP1-2 PE=1 SV=2) HSP 1 Score: 114.775 bits (286), Expect = 4.075e-25 Identity = 69/184 (37.50%), Postives = 101/184 (54.89%), Query Frame = 2 Query: 2 IFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKG----SALGAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYI 538 +FV V A ISGGH+NPAVTFG+ L ++L+R + Y +AQ LG++ L+ + GG A G + G +AL EI+ TF LVYTV+ +A DPK + + +AP+ IGF V LA +G +NPA +FG AV+ W +HW++W GP +G A + ++ Sbjct: 70 LFVAVSVGANISGGHVNPAVTFGVLLGGNITLLRGILYWIAQLLGSVAACFLL--------SFATGGEPIPAFGLSAGVGSLNALVFEIVMTFGLVYTVYATAVDPKNGS----LGTIAPIAIGFIVGANILAGGAFSGASMNPAVAFGPAVV---SWTWTNHWVYWAGPLIGGGLAGIIYDFV 238
BLAST of DC900303 vs. ExPASy Swiss-Prot
Match: TIP23_ARATH (Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3 PE=1 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 6.951e-25 Identity = 74/177 (41.81%), Postives = 100/177 (56.50%), Query Frame = 2 Query: 2 IFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFV-GALAAAAY 526 +FV V A ISGGH+NPAVT GL + ++LI Y +AQCLG+I L+ F+ N + V++G + EI+ TF LVYTV+ +A DPK+ + + +AP+ IGF V LA P +G +NPARSFG AV+ + WI+WVGP V GALA Y Sbjct: 67 LFVGVSIAANISGGHLNPAVTLGLAIGGNITLITGFFYWIAQCLGSIVAC-LLLVFVT---NGKSVPTHGVSAGLGAVEGVVMEIVVTFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGD---LSQIWIYWVGPLVGGALAGLIY 232
BLAST of DC900303 vs. ExPASy Swiss-Prot
Match: TIP22_ARATH (Probable aquaporin TIP2-2 OS=Arabidopsis thaliana GN=TIP2-2 PE=1 SV=2) HSP 1 Score: 114.005 bits (284), Expect = 6.951e-25 Identity = 74/177 (41.81%), Postives = 101/177 (57.06%), Query Frame = 2 Query: 2 IFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFV-GALAAAAY 526 +FV V A ISGGH+NPAVT GL + +++I Y +AQCLG+I L+ F+ N + VA+G + EI+ TF LVYTV+ +A DPK+ + + +AP+ IGF V LA P +G +NPARSFG AV+ + + WI+WVGP V GALA Y Sbjct: 67 LFVGVSIAANISGGHLNPAVTLGLAVGGNITVITGFFYWIAQCLGSIVAC-LLLVFVT---NGESVPTHGVAAGLGAIEGVVMEIVVTFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGD---FSQIWIYWVGPLVGGALAGLIY 232
BLAST of DC900303 vs. ExPASy Swiss-Prot
Match: TIP11_ARATH (Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1 PE=1 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 6.951e-25 Identity = 68/182 (37.36%), Postives = 101/182 (55.49%), Query Frame = 2 Query: 2 IFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFV-GALAAAAYHQYIL 541 +FV V A ISGGH+NPAVTFG F+ ++L+R + Y +AQ LG++ + +K L A +++G +A EI+ TF LVYTV+ +A DPK + + +AP+ IGF V LA +G +NPA +FG AV+ W +HW++W GP V G +A Y + + Sbjct: 69 LFVAVSVGANISGGHVNPAVTFGAFIGGNITLLRGILYWIAQLLGSV----VACLILKFATGGLAVPAFGLSAGVGVLNAFVFEIVMTFGLVYTVYATAIDPKNGS----LGTIAPIAIGFIVGANILAGGAFSGASMNPAVAFGPAVV---SWTWTNHWVYWAGPLVGGGIAGLIYEVFFI 239
BLAST of DC900303 vs. ExPASy Swiss-Prot
Match: MIP_SHEEP (Lens fiber major intrinsic protein OS=Ovis aries GN=MIP PE=1 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 6.951e-25 Identity = 63/177 (35.59%), Postives = 97/177 (54.80%), Query Frame = 2 Query: 11 LVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 541 LV ISG H+NPAVTF + ++SL+RA+ Y+VAQ LGA+ G ++ + NT+ G + G A EI T V +F+ D +R+ R V L +GF++ + HL + TG G+NPARSF A++ N + +HW++WVGP +GA + + ++L Sbjct: 55 LVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYVVAQLLGAVAGAAVLYSVTPPAVRG-NLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSV----ALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRN---FTNHWVYWVGPVIGAGLGSLLYDFLL 223 The following BLAST results are available for this feature:
BLAST of DC900303 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 193
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DC900303 ID=DC900303; Name=DC900303; organism=Citrus sinensis; type=EST; length=658bpback to top |