DC900289
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: PEX6_YEAST (Peroxisomal ATPase PEX6 OS=Saccharomyces cerevisiae GN=PEX6 PE=1 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.980e-16 Identity = 58/150 (38.67%), Postives = 86/150 (57.33%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGTKRYD-AHSGGEREIQRTMLELLNQLDGFDSRGD-VKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRR-RIFQIHTSRMTLADDVNLEEFV-MTKDEFSGADIKAICTEAGLLAL 439 E E +F+ A + P ++F DEID+V KR + SGG + R + +LL +LDG + D V VI ATNR + LD ALLRPGR D+ + +PD T++ I + T + L +DV L E + ++GAD A+C++A L A+ Sbjct: 808 ESEANVRRVFQKAREAKPCVIFFDEIDSVAPKRGNQGDSGGVMD--RIVSQLLAELDGMSTDADGVFVIGATNRPDLLDEALLRPGRFDKLLYLGIPDTDTKQLNILEALTRKFVLDNDVKLIELAKLCPFNYTGADFYALCSDAMLNAM 955
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: KTNA1_DANRE (Katanin p60 ATPase-containing subunit A1 OS=Danio rerio GN=katna1 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.980e-16 Identity = 54/155 (34.84%), Postives = 86/155 (55.48%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGD------VKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRER 448 E E+ LF +A +P+ +FIDEID++ ++R S +R ELL Q+DG + V V+ ATN +D AL R R++++I PLP K R + +I+ + LA+DVN+++ + +SGADI +C +A L+A+R R Sbjct: 280 ESEKLVRLLFEMARFYAPTTIFIDEIDSICSRR--GTSEEHEASRRVKAELLVQMDGVGGTSENDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPSAKGRVDLLKINLKELDLANDVNMDKIAEQMEGYSGADITNVCRDASLMAMRRR 430
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: KTNA1_CHICK (Katanin p60 ATPase-containing subunit A1 OS=Gallus gallus GN=KATNA1 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.980e-16 Identity = 56/156 (35.90%), Postives = 84/156 (53.85%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGF-------DSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRER 448 E E+ LF +A +P+ +FIDEID++ ++R S +R ELL Q+DG D V V+ ATN +D AL R R++++I PLP K R + +I+ + LADDV+L + +SGADI +C +A L+A+R R Sbjct: 286 ESEKLVRLLFEMARFYAPTTIFIDEIDSICSRR--GTSEEHEASRRVKAELLVQMDGVGGATENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPSAKGREELLRINLRELELADDVDLANIAEKMEGYSGADITNVCRDASLMAMRRR 437
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: PEX6_DICDI (Peroxisomal biogenesis factor 6 OS=Dictyostelium discoideum GN=pex6 PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.198e-16 Identity = 55/152 (36.18%), Postives = 84/152 (55.26%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGTKRYD-AHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRR-RIFQIHTSRMTLADDVNLEEFVMT-KDEFSGADIKAICTEAGLLALRER 448 E E+ ++F A P ++F DE+D++ R + A SGG + R + +LL +LDG DV +I ATNR + LD +L+RPGR+DR + + K + +I Q T + LADDV+L + V +GAD A+ ++A A ER Sbjct: 995 ESEKNIREIFNKARQAKPCVIFFDELDSLAPSRGNGADSGGVMD--RVVSQLLAELDGMQKSSDVFIIGATNRPDLLDSSLMRPGRLDRLLYLGISSEKENQFKILQALTRKFNLADDVDLRKVVENCPMNLTGADFYALASDAMSNAFHER 1144
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: NSF_PONAB (Vesicle-fusing ATPase OS=Pongo abelii GN=NSF PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.788e-16 Identity = 52/145 (35.86%), Postives = 84/145 (57.93%), Query Frame = 2 Query: 20 EDLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTML-ELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRM----TLADDVNLEEFVMTKDEFSGADIKAICTEAGLLAL 439 E+ R+ + I+ DEIDA+ +R G + T++ +LL+++DG + ++ VI TNR + +D ALLRPGR++ K+E LPD K R +I IHT+RM L+ DV+++E M FSGA+++ + A A+ Sbjct: 311 EEQRRLGANSGLHIIIFDEIDAICKQR--GSMAGSTGVHDTVVNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLLSADVDIKELAMETKNFSGAELEGLVRAAQSTAM 453
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: SEC18_YEAST (Vesicular-fusion protein SEC18 OS=Saccharomyces cerevisiae GN=SEC18 PE=1 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 8.866e-16 Identity = 55/165 (33.33%), Postives = 84/165 (50.91%), Query Frame = 2 Query: 41 DDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRM----TLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRE----------------RRMKVTHTDF 475 ++ S I+ DE+D+V +R + G + +LL ++DG D ++ VI TNR + +D ALLRPGR + ++E LPD K R +IF I T +M ++DDVNL E FSGA+I+ + A A+ + ++KVT DF Sbjct: 339 EESSLHIIIFDELDSVFKQR-GSRGDGTGVGDNVVNQLLAKMDGVDQLNNILVIGMTNRKDLIDSALLRPGRFEVQVEIHLPDEKGRLQIFDIQTKKMRENNMMSDDVNLAELAALTKNFSGAEIEGLVKSASSFAINKTVNIGKGATKLNTKDIAKLKVTREDF 502
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: NSF_DICDI (Vesicle-fusing ATPase OS=Dictyostelium discoideum GN=nsfA PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.866e-16 Identity = 50/136 (36.76%), Postives = 74/136 (54.41%), Query Frame = 2 Query: 41 DDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRM----TLADDVNLEEFVMTKDEFSGADIKAICTEAGLLA 436 DD I+ DE+DA+ R + G + +LL +DG +S ++ VI TNR + +D ALLRPGR++ +E LPD R +IF+IHT++M L DVNL + T +SGA+I+ + A A Sbjct: 322 DDSGLHIIIFDELDAICKSR-GSRQGDSGVGDSVVNQLLAMIDGVESLNNILVIGMTNRKDMIDEALLRPGRLEVHVEISLPDEHGREQIFKIHTAKMRDQNALDKDVNLANYAHTTRNYSGAEIEGVVKSAASYA 456
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: KTNA1_SALSA (Katanin p60 ATPase-containing subunit A1 OS=Salmo salar GN=katna1 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.866e-16 Identity = 54/156 (34.62%), Postives = 85/156 (54.49%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGD-------VKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRER 448 E E+ LF +A +P+ +FIDEID++ ++R S +R ELL Q+DG D V V+ ATN +D AL R R++++I PLP K R + +I+ + LA+DV++ + + +SGADI +C +A L+A+R R Sbjct: 280 ESEKLVRILFEMARFYAPTTIFIDEIDSMCSRR--GTSEEHEASRRVKAELLVQMDGVGGASDNEDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPSAKGRVELLRINLKELELANDVDMAKIAEQSEGYSGADITNVCRDASLMAMRRR 431
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: KTNA1_ARATH (Katanin p60 ATPase-containing subunit OS=Arabidopsis thaliana GN=AAA1 PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.866e-16 Identity = 54/157 (34.39%), Postives = 84/157 (53.50%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFD--------SRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRER 448 E ER LF +A +PS +FIDEID++ R SG +R ELL Q+DG SR V V+ ATN +D AL R R++++I PLPD ++R+ + I+ + +A DVN+E+ + +SG D+ +C +A + +R + Sbjct: 315 ESERMVRCLFDLARAYAPSTIFIDEIDSLCNSR--GGSGEHESSRRVKSELLVQVDGVSNTATNEDGSRKIVMVLAATNFPWDIDEALRR--RLEKRIYIPLPDFESRKALININLRTVEVASDVNIEDVARRTEGYSGDDLTNVCRDASMNGMRRK 467
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: NSF_ARATH (Vesicle-fusing ATPase OS=Arabidopsis thaliana GN=NSF PE=2 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 1.158e-15 Identity = 60/183 (32.79%), Postives = 89/183 (48.63%), Query Frame = 2 Query: 2 EREREREDLF-------RVADDLSP-SIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMT----LADDVNLEEFVMTKDEFSGADIKAICTEAGLLAL-------------RERRMKVTHTDF 475 E E+ DLF R D S ++ DEIDA+ R G + +LL ++DG ++ +V +I TNR + LD ALLRPGR++ ++E LPD R +I QIHT++M L D+NL+E +SGA+++ + A AL E +K+T DF Sbjct: 294 ETEKNVRDLFADAEQDQRTLGDASELHVIIFDEIDAICKSRGSTRDGTGVH-DSIVNQLLTKIDGVEALNNVLLIGMTNRKDLLDEALLRPGRLEVQVEISLPDEAGRLQILQIHTNKMKENSFLGTDINLQELAARTKNYSGAELEGVVKSATSYALNRQLSMDDLTKPVEEENIKITMEDF 475 The following BLAST results are available for this feature:
BLAST of DC900289 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 353
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900289 ID=DC900289; Name=DC900289; organism=Citrus sinensis; type=EST; length=706bpback to top |