DC900289
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: PEX6_GLOLA (Peroxisomal biogenesis factor 6 OS=Glomerella lagenarium GN=PEX6 PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.512e-15 Identity = 59/160 (36.88%), Postives = 87/160 (54.37%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGTKRYD-AHSGGEREIQRTMLELLNQLDGF----DSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRR-RIFQIHTSRMTLADDVNLEEFVMTKD-EFSGADIKAICTEAGLLALRERRMKV 460 E E +F+ A D P +VF DE+D+V KR + SGG + R + +LL +LDG D+ G V VI ATNR + LDPALLRPGR D+ + + D ++ +I + T + TL V+L ++GAD A+C++A L A+ + V Sbjct: 1070 ESEANVRRVFQRARDARPCVVFFDELDSVAPKRGNQGDSGGVMD--RIVSQLLAELDGMSGGDDTSGGVFVIGATNRPDLLDPALLRPGRFDKMLYLGVSDTHDKQLKILEALTRKFTLHPSVSLHSVAQQLPFTYTGADFYALCSDAMLKAVTRQAASV 1227
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: YME1_SCHMA (Protein YME1 homolog OS=Schistosoma mansoni PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.975e-15 Identity = 48/137 (35.04%), Postives = 77/137 (56.20%), Query Frame = 2 Query: 26 LFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLA 436 LF A SP +VFIDEID+VG R S +T+ +LL ++DGF S+ + V+ ATN+ E LD ALLRPGR D +I P + R + ++ ++ ++++E+ ++GADI+ + +A + A Sbjct: 250 LFTTAKQNSPCLVFIDEIDSVGGNR--TFSPHHPFANQTINQLLAEMDGFQSKEGIIVLGATNQAEVLDKALLRPGRFDVQIHVSPPTYEGRIALLNLYLKKVKTGSNIDIEKLAHGTVGYTGADIQNLVNQAAIAA 384
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: PRS2_METJA (Putative 26S protease regulatory subunit homolog MJ1494 OS=Methanocaldococcus jannaschii GN=MJ1494 PE=3 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 1.975e-15 Identity = 51/129 (39.53%), Postives = 72/129 (55.81%), Query Frame = 2 Query: 23 DLFRVADDLSPSIVFIDEIDAVGTKR-YDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIK 406 +L++ A + +P IVFIDE+DA+G R Y + G E+ LL +LDG V I ATN LDPA+ R + +IEF LP+ + R +I +++ +M L NL+EFV FSG DIK Sbjct: 204 ELYQRASESAPCIVFIDELDAIGLSREYQSLRGDVSEVVNA---LLTELDGIKENEGVVTIAATNNPAMLDPAIR--SRFEEEIEFKLPNDEERLKIMELYAKKMPLPVKANLKEFVEKTKGFSGRDIK 327
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: PEX6_ASHGO (Peroxisomal biogenesis factor 6 OS=Ashbya gossypii GN=PEX6 PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.975e-15 Identity = 56/150 (37.33%), Postives = 87/150 (58.00%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGTKRYD-AHSGGEREIQRTMLELLNQLDGFDSRGD-VKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRR-RIFQIHTSRMTLADDVNLEEFVMT-KDEFSGADIKAICTEAGLLAL 439 E E +F+ A D P ++F DE+D+V KR + SGG + R + +LL +LDG + GD + VI ATNR + LD ALLRPGR D+ + + D ++ I + T + TL DV+L++ + ++GAD A+C++A L A+ Sbjct: 799 ESEANVRRVFQRARDAKPCVIFFDELDSVAPKRGNQGDSGGVMD--RIVSQLLAELDGLSTGGDGLFVIGATNRPDLLDEALLRPGRFDKLLYLGISDTNEKQANILRALTRKFTLDPDVSLDDLAASCPFTYTGADFYALCSDAMLNAM 946
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: NSF_RAT (Vesicle-fusing ATPase OS=Rattus norvegicus GN=Nsf PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.975e-15 Identity = 51/145 (35.17%), Postives = 84/145 (57.93%), Query Frame = 2 Query: 20 EDLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTML-ELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRM----TLADDVNLEEFVMTKDEFSGADIKAICTEAGLLAL 439 E+ R+ + I+ DEIDA+ +R G + T++ +LL+++DG + ++ VI TNR + +D ALLRPGR++ K+E LPD K R +I IHT+RM L+ DV+++E + FSGA+++ + A A+ Sbjct: 311 EEQRRLGANSGLHIIIFDEIDAICKQR--GSMAGSTGVHDTVVNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLLSADVDIKELAVETKNFSGAELEGLVRAAQSTAM 453
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: NSF_MOUSE (Vesicle-fusing ATPase OS=Mus musculus GN=Nsf PE=1 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 1.975e-15 Identity = 51/145 (35.17%), Postives = 84/145 (57.93%), Query Frame = 2 Query: 20 EDLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTML-ELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRM----TLADDVNLEEFVMTKDEFSGADIKAICTEAGLLAL 439 E+ R+ + I+ DEIDA+ +R G + T++ +LL+++DG + ++ VI TNR + +D ALLRPGR++ K+E LPD K R +I IHT+RM L+ DV+++E + FSGA+++ + A A+ Sbjct: 311 EEQRRLGANSGLHIIIFDEIDAICKQR--GSMAGSTGVHDTVVNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLLSADVDIKELAVETKNFSGAELEGLVRAAQSTAM 453
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: NSF_HUMAN (Vesicle-fusing ATPase OS=Homo sapiens GN=NSF PE=1 SV=3) HSP 1 Score: 82.8037 bits (203), Expect = 1.975e-15 Identity = 51/145 (35.17%), Postives = 84/145 (57.93%), Query Frame = 2 Query: 20 EDLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTML-ELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRM----TLADDVNLEEFVMTKDEFSGADIKAICTEAGLLAL 439 E+ R+ + I+ DEIDA+ +R G + T++ +LL+++DG + ++ VI TNR + +D ALLRPGR++ K+E LPD K R +I IHT+RM L+ DV+++E + FSGA+++ + A A+ Sbjct: 311 EEQRRLGANSGLHIIIFDEIDAICKQR--GSMAGSTGVHDTVVNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLLSADVDIKELAVETKNFSGAELEGLVRAAQSTAM 453
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: NSF_CRIGR (Vesicle-fusing ATPase OS=Cricetulus griseus GN=NSF PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.975e-15 Identity = 51/145 (35.17%), Postives = 84/145 (57.93%), Query Frame = 2 Query: 20 EDLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTML-ELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRM----TLADDVNLEEFVMTKDEFSGADIKAICTEAGLLAL 439 E+ R+ + I+ DEIDA+ +R G + T++ +LL+++DG + ++ VI TNR + +D ALLRPGR++ K+E LPD K R +I IHT+RM L+ DV+++E + FSGA+++ + A A+ Sbjct: 311 EEQRRLGANSGLHIIIFDEIDAICKQR--GSMAGSTGVHDTVVNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLLSADVDIKELAVETKNFSGAELEGLVRAAQSTAM 453
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: YR476_MIMIV (Putative AAA family ATPase R476 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R476 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.369e-15 Identity = 56/157 (35.67%), Postives = 89/157 (56.69%), Query Frame = 2 Query: 20 EDLFRVADDLSPS-IVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRM----TLADDVNLEEFVMTKDEFSGADIKAICTEAGLLAL-RERRMKVTHTD 472 +D ++ D SP +V IDEIDA+ R + S G + + L ++DG + ++ I TNR+E LDPA +R GR I+ LPD + R +IFQIHT ++ L+DDV++ + + +EFSGADI+ + A + +L R ++ V + D Sbjct: 662 KDAWKKHGDKSPVYMVVIDEIDAMLPSR--SGSDGNPVRDSVVNQFLAEMDGLEVFNNLICIGITNRLELLDPATIRSGRFGIHIKIDLPDQEGRVKIFQIHTKKLQELNRLSDDVDISKLAVITEEFSGADIEGMVELASVYSLERLNKLDVINDD 816
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: CD48C_ARATH (Cell division control protein 48 homolog C OS=Arabidopsis thaliana GN=CDC48C PE=1 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 3.369e-15 Identity = 55/156 (35.26%), Postives = 83/156 (53.21%), Query Frame = 2 Query: 8 EREREDLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQ-RTMLELLNQLDGFDSRGD----------VKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALR 442 E +LF A +PSIVFIDEIDA+G+KR + +RE++ R + +LL +DG ++GD V VI ATNR ++LDPAL R GR + +I PD R I + ++ L + + F GAD++++ AG A++ Sbjct: 312 EENIRELFSKAYRTAPSIVFIDEIDAIGSKRENQ----QREMEKRIVTQLLTCMDGPGNKGDKNAPDSSAGFVLVIGATNRPDALDPALRRSGRFETEIALTAPDEDARAEILSVVAQKLRLEGPFDKKRIARLTPGFVGADLESVAYLAGRKAIK 463 HSP 2 Score: 74.3294 bits (181), Expect = 7.025e-13 Identity = 51/149 (34.23%), Postives = 77/149 (51.68%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDE-FSGADIKAICTEAGLLALRE 445 E E LF+ A +P ++F DE+DA+ T R G ++R + + L +LDG + R +V VI ATNR + +DPA LRPGR + PLP+ R I + + + V+L+ E FSGAD+ + +A A+ E Sbjct: 605 ESELAIRTLFQRARTCAPCVIFFDEVDALTTSR---GKEGAWVVERLLNQFLVELDGGERR-NVYVIGATNRPDVVDPAFLRPGRFGNLLYVPLPNADERASILKAIARKKPIDPSVDLDGIAKNNCEGFSGADLAHLVQKATFQAVEE 749 The following BLAST results are available for this feature:
BLAST of DC900289 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 353
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900289 ID=DC900289; Name=DC900289; organism=Citrus sinensis; type=EST; length=706bpback to top |