DC900289
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: KATL1_SORAR (Katanin p60 ATPase-containing subunit A-like 1 OS=Sorex araneus GN=KATNAL1 PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.672e-14 Identity = 54/156 (34.62%), Postives = 83/156 (53.21%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGF-------DSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRER 448 E E+ LF +A +P+ +FIDEID++ ++R S +R ELL Q+DG D V V+ ATN +D AL R R++++I PLP K R + +I+ + L D+ LE+ + +SGADI +C +A L+A+R R Sbjct: 284 ESEKLVRLLFEMARFYAPTTIFIDEIDSICSRR--GTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPTAKGRTDLLKINLREVELDPDIQLEDIAEKIEGYSGADITNVCRDASLMAMRRR 435
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: KATL1_RABIT (Katanin p60 ATPase-containing subunit A-like 1 OS=Oryctolagus cuniculus GN=KATNAL1 PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.672e-14 Identity = 54/156 (34.62%), Postives = 82/156 (52.56%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGF-------DSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRER 448 E E+ LF +A +P+ +FIDEID++ ++R S +R ELL Q+DG D V V+ ATN +D AL R R++++I PLP K R + +I + L D+ LE+ + +SGADI +C +A L+A+R R Sbjct: 284 ESEKLVRLLFEMARFYAPTTIFIDEIDSICSRR--GTSDEHEASRRVKSELLVQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPTAKGRAELLKISLREVELDPDIRLEDIAEKIEGYSGADITNVCRDASLMAMRRR 435
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: PEX6_PENCH (Peroxisomal biogenesis factor 6 OS=Penicillium chrysogenum GN=pex6 PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.184e-14 Identity = 59/163 (36.20%), Postives = 90/163 (55.21%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGTKRYD-AHSGGEREIQRTMLELLNQLDGF----DSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDI-KTRRRIFQIHTSRMTLADDVNL----EEFVMTKDEFSGADIKAICTEAGLLALRERRMKV 460 E E +F+ A D P +VF DE+D+V KR + SGG + R + +LL +LDG ++ G V VI ATNR + LD ALLRPGR D+ + + D + + I + T + L DV+L E+ +T ++GAD+ A+C++A L A+ + V Sbjct: 1106 ESEANVRRVFQRARDARPCVVFFDELDSVAPKRGNQGDSGGVMD--RIVSQLLAELDGMNGGEENSGGVFVIGATNRPDLLDTALLRPGRFDKMLYLGVSDTHRKQATILEALTRKFALHPDVSLDRVAEQLPLT---YTGADLYALCSDAMLKAITRKATAV 1263
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: KATL1_DANRE (Katanin p60 ATPase-containing subunit A-like 1 OS=Danio rerio GN=katnal1 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.184e-14 Identity = 54/156 (34.62%), Postives = 83/156 (53.21%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGF-------DSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRER 448 E E+ LF +A +P+ +FIDEID++ +R S +R ELL Q+DG D V V+ ATN +D AL R R++++I PLP K R + +I+ + +A DV+L F + +SGADI +C +A ++A+R R Sbjct: 282 ESEKLVRLLFEMARFYAPTTIFIDEIDSICGRR--GTSDEHEASRRVKSELLVQMDGVGGAQESEDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPTAKGRAELLKINLREVDVASDVDLTVFAEKIEGYSGADITNVCRDASMMAMRRR 433
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: PEX6_MOUSE (Peroxisome assembly factor 2 OS=Mus musculus GN=Pex6 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.852e-14 Identity = 53/152 (34.87%), Postives = 83/152 (54.61%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGTKR-YDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEF-PLPDIKTRRRIFQIHTSRMTLADDVNLEEFV-MTKDEFSGADIKAICTEAGLLALRER 448 + E ++F A +P I+F DE+D++ R SGG + R + +LL +LDG S DV VI ATNR + LDPALLRPGR D+ + D ++ R+ T + L V+L + + +GAD+ ++C++A + AL+ R Sbjct: 781 QSEENVREVFARARAAAPCIIFFDELDSLAPSRGRSGDSGGVMD--RVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGASEDRASQLRVLSAITRKFKLEASVSLANVLDCCPPQLTGADLYSLCSDAMMTALKRR 930
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: PEX6_RAT (Peroxisome assembly factor 2 OS=Rattus norvegicus GN=Pex6 PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.725e-14 Identity = 53/152 (34.87%), Postives = 83/152 (54.61%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGTKR-YDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEF-PLPDIKTRRRIFQIHTSRMTLADDVNLEEFV-MTKDEFSGADIKAICTEAGLLALRER 448 + E ++F A +P I+F DE+D++ R SGG + R + +LL +LDG S DV VI ATNR + LDPALLRPGR D+ + D ++ R+ T + L V+L + + +GAD+ ++C++A + AL+ R Sbjct: 778 QSEENVREVFARARAAAPCIIFFDELDSLAPSRGRSGDSGGVMD--RVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGASEDRASQLRVLSAITRKFKLEASVSLMNVLDCCPPQLTGADLYSLCSDAMMTALKRR 927
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: PEX6_HUMAN (Peroxisome assembly factor 2 OS=Homo sapiens GN=PEX6 PE=1 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 6.354e-14 Identity = 53/152 (34.87%), Postives = 82/152 (53.95%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGTKR-YDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPL-PDIKTRRRIFQIHTSRMTLADDVNLEEFV-MTKDEFSGADIKAICTEAGLLALRER 448 + E ++F A +P I+F DE+D++ R SGG + R + +LL +LDG S DV VI ATNR + LDPALLRPGR D+ + D ++ R+ T + L V+L + + +GAD+ ++C++A AL+ R Sbjct: 780 QSEENVREVFARARAAAPCIIFFDELDSLAPSRGRSGDSGGVMD--RVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGANEDRASQLRVLSAITRKFKLEPSVSLVNVLDCCPPQLTGADLYSLCSDAMTAALKRR 929
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: PEX6_NEUCR (Peroxisomal biogenesis factor 6 OS=Neurospora crassa GN=pex-6 PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.084e-13 Identity = 57/153 (37.25%), Postives = 82/153 (53.59%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGTKRYD-AHSGGEREIQRTMLELLNQLDGFDSR----GDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRR-RIFQIHTSRMTLADDVNLEEFV-MTKDEFSGADIKAICTEAGLLAL 439 E E +F+ A D P +VF DE+D+V KR + SGG + R + +LL +LDG G V VI ATNR + LDPALLRPGR D+ + + D ++ I + T + TL V+L ++GAD A+C++A L A+ Sbjct: 1067 ESEANVRRVFQRARDARPCVVFFDELDSVAPKRGNQGDSGGVMD--RIVSQLLAELDGMSGGEGGGGGVFVIGATNRPDLLDPALLRPGRFDKMLYLGVSDTHDKQVTIMEALTRKFTLHPTVSLRSVAERLPFTYTGADFYALCSDAMLKAV 1217
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: NSF1_DROME (Vesicle-fusing ATPase 1 OS=Drosophila melanogaster GN=comt PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.084e-13 Identity = 50/144 (34.72%), Postives = 80/144 (55.56%), Query Frame = 2 Query: 8 EREREDLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTML-ELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRM----TLADDVNLEEFVMTKDEFSGADIKAICTEA 424 E E E+ R+ + I+ DEIDA+ +R G + T++ +LL ++DG D ++ VI TNR + +D ALLRPGR++ ++E LP+ + R +I IHT RM + DDV+ +E FSGA+++ + A Sbjct: 308 EAEEEEK-RLGPNSGLHIIIFDEIDAICKQRGSV--AGNSGVHDTVVNQLLTKIDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEISLPNEQGRVQILNIHTKRMREFNKINDDVDNKEIAALTKNFSGAELEGLVRAA 448
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: FIGL1_HUMAN (Fidgetin-like protein 1 OS=Homo sapiens GN=FIGNL1 PE=1 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 1.415e-13 Identity = 49/150 (32.67%), Postives = 81/150 (54.00%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVIL--ATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRI-FQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALR 442 E E+ LF VA P+++FIDEID++ ++R D R I+ E L QLDG + + ++++ ATNR + +D A R R+ +++ PLP+ R++I + + + +E+ V D FSGAD+ +C EA L +R Sbjct: 477 EGEKMVRALFAVARCQQPAVIFIDEIDSLLSQRGDGEHESSRRIK---TEFLVQLDGATTSSEDRILVVGATNRPQEIDEAARR--RLVKRLYIPLPEASARKQIVINLMSKEQCCLSEEEIEQIVQQSDAFSGADMTQLCREASLGPIR 621 The following BLAST results are available for this feature:
BLAST of DC900289 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 353
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900289 ID=DC900289; Name=DC900289; organism=Citrus sinensis; type=EST; length=706bpback to top |