DC900289
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: PRS6A_SCHPO (26S protease regulatory subunit 6A OS=Schizosaccharomyces pombe GN=tbp1 PE=2 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 4.820e-46 Identity = 85/151 (56.29%), Postives = 117/151 (77.48%), Query Frame = 2 Query: 23 DLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 475 D F +A + SP+I+FIDE+DA+GTKR+D+ G+RE+QRTMLELLNQLDGF S VKVI ATNR+++LDPALLR GR+DRK+EFPLP+ + R I +IH+ +M + DD+N EE + DE++GA +K++C EAG++ALR+ K+ H F Sbjct: 269 DAFALAKEKSPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSDDRVKVIAATNRVDTLDPALLRSGRLDRKLEFPLPNEEARVGILRIHSRKMAIDDDINWEELARSTDEYNGAMLKSVCVEAGMIALRQGDTKINHEHF 419
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: PRS6B_SOLTU (26S protease regulatory subunit 6B homolog OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 6.295e-46 Identity = 86/158 (54.43%), Postives = 122/158 (77.22%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 475 E R D+FR+A + +P+I+FIDE+DA+ T R+DA +G +RE+QR ++ELLNQ+DGFD +VKVI+ATNR ++LDPALLRPGR+DRKIEFPLPD + +R +FQ+ T++M L D+V+LE++V D+ S A+I AIC EAG+ A+R+ R + DF Sbjct: 237 EGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDLEDYVSRPDKISAAEITAICQEAGMHAVRKNRYVILPKDF 394
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: PS6AA_ARATH (26S protease regulatory subunit 6A homolog A OS=Arabidopsis thaliana GN=RPT5A PE=2 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 8.221e-46 Identity = 88/151 (58.28%), Postives = 113/151 (74.83%), Query Frame = 2 Query: 23 DLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 475 D F++A + +P I+FIDEIDA+GTKR+D+ G+RE+QRTMLELLNQLDGF S +KVI ATNR + LDPAL+R GR+DRKIEFP P + R RI QIH+ +M + DVN EE + D+F+GA +KA+C EAG+LALR +V H DF Sbjct: 255 DAFQLAKEKAPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDF 405
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: PRS6A_BRACM (26S protease regulatory subunit 6A homolog OS=Brassica campestris GN=TBP1 PE=2 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 8.221e-46 Identity = 88/151 (58.28%), Postives = 113/151 (74.83%), Query Frame = 2 Query: 23 DLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 475 D F++A + +P I+FIDEIDA+GTKR+D+ G+RE+QRTMLELLNQLDGF S +KVI ATNR + LDPAL+R GR+DRKIEFP P + R RI QIH+ +M + DVN EE + D+F+GA +KA+C EAG+LALR +V H DF Sbjct: 255 DAFQLAKEKAPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDF 405
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: PS6AB_ARATH (26S protease regulatory subunit 6A homolog B OS=Arabidopsis thaliana GN=RPT5B PE=1 SV=3) HSP 1 Score: 183.341 bits (464), Expect = 1.074e-45 Identity = 89/151 (58.94%), Postives = 112/151 (74.17%), Query Frame = 2 Query: 23 DLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 475 D F +A + SP I+FIDEIDA+GTKR+D+ G+RE+QRTMLELLNQLDGF S +KVI ATNR + LDPAL+R GR+DRKIEFP P + R RI QIH+ +M + DVN EE + D+F+GA +KA+C EAG+LALR +V H DF Sbjct: 254 DAFLLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARGRILQIHSRKMNVNADVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDF 404
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: PRS6A_ENCCU (26S protease regulatory subunit 6A OS=Encephalitozoon cuniculi GN=RPT5 PE=1 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 1.074e-45 Identity = 91/179 (50.84%), Postives = 123/179 (68.72%), Query Frame = 2 Query: 23 DLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDFXXXXXXXXXXXXEGVPEGLYM*KTSLFY 559 D F +A + P+I+FIDEIDA+G KR D+ G+RE+QRTMLELLNQLDGF S +VK+I ATNR++ LDPALLR GR+DRKIEFPLP+ R+RI QIH +M++ DDVN +E + + F+GA KA+C EAG+ ALR+ + +++ DF +G+ E L K+ L Y Sbjct: 232 DAFALAKERKPTIIFIDEIDAIGAKRSDSDQTGDREVQRTMLELLNQLDGFSSSEEVKIIAATNRVDILDPALLRSGRLDRKIEFPLPNTLGRKRILQIHARKMSVRDDVNFDELARSTEGFNGAQCKAVCVEAGMAALRKEKTEISQNDF-----------MDGIQEVLSRKKSKLLY 399
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: PSMR_ARCFU (Proteasome-activating nucleotidase OS=Archaeoglobus fulgidus GN=pan PE=1 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 1.832e-45 Identity = 90/158 (56.96%), Postives = 120/158 (75.95%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 475 E R ++F++A + +PSI+FIDE+DA+ +R ++ + G+RE+QRTM++LL +LDGFD RGDVKVI ATNRI+ LDPA+LRPGR DR IE PLP + R +IF+IHT +M LA+DV+ +E + SGADIKAICTEAG+ A+RE R KVT DF Sbjct: 218 EGARLVREVFQLAKEKAPSIIFIDELDAIAARRTNSDTSGDREVQRTMMQLLAELDGFDPRGDVKVIGATNRIDILDPAILRPGRFDRIIEVPLPTFEGRIQIFKIHTRKMKLAEDVDFKELARITEGASGADIKAICTEAGMFAIREERAKVTMLDF 375
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: PRS6B_ENCCU (26S protease regulatory subunit 6B homolog OS=Encephalitozoon cuniculi GN=ECU08_1970 PE=1 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 3.124e-45 Identity = 87/158 (55.06%), Postives = 119/158 (75.32%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 475 E R D+FR+A + +PSIVFIDE+D++ TKR+DA + +RE+QR ++ELLNQ+DGFD +VKVI+ATNR +++DPALLRPGR+DRKIEFPLPD + +R +F TS+M+L D V++E V ++ S ADI +IC EAG+LA+R R VT DF Sbjct: 211 EGPRMVRDVFRLAREKAPSIVFIDEVDSIATKRFDASTSADREVQRVLIELLNQMDGFDPAANVKVIMATNRADTIDPALLRPGRLDRKIEFPLPDRRQKRLVFNAITSKMSLNDSVDIESLVCRPEKISCADINSICQEAGMLAVRASRYMVTQRDF 368
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: PSMR_METJA (Proteasome-activating nucleotidase OS=Methanocaldococcus jannaschii GN=pan PE=1 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 4.080e-45 Identity = 89/152 (58.55%), Postives = 117/152 (76.97%), Query Frame = 2 Query: 20 EDLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 475 +D+F++A + +PSI+FIDEIDA+ KR DA +GG+RE+QRT+++LL ++DGFD+RGDVK+I ATNR + LDPA+LRPGR DR IE P PD K R I +IHT +M LA+DVNLEE + GA++KAICTEAG+ A+RE R VT DF Sbjct: 253 KDIFKLAKEKAPSIIFIDEIDAIAAKRTDALTGGDREVQRTLMQLLAEMDGFDARGDVKIIGATNRPDILDPAILRPGRFDRIIEVPAPDEKGRLEILKIHTRKMNLAEDVNLEEIAKMTEGCVGAELKAICTEAGMNAIRELRDYVTMDDF 404
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: PRS8_YEAST (26S protease regulatory subunit 8 homolog OS=Saccharomyces cerevisiae GN=RPT6 PE=1 SV=4) HSP 1 Score: 178.333 bits (451), Expect = 3.454e-44 Identity = 85/158 (53.80%), Postives = 116/158 (73.42%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHTDF 475 E R +LF +A + +PSI+F+DEID++G+ R + GG+ E+QRTMLELLNQLDGF++ ++K+I+ATNR++ LDPALLRPGRIDRKIEFP P + R I +IH+ +M L +NL + + SGAD+K +CTEAG+ ALRERR+ VT DF Sbjct: 225 EGSRMVRELFVMAREHAPSIIFMDEIDSIGSTRVEGSGGGDSEVQRTMLELLNQLDGFETSKNIKIIMATNRLDILDPALLRPGRIDRKIEFPPPSVAARAEILRIHSRKMNLTRGINLRKVAEKMNGCSGADVKGVCTEAGMYALRERRIHVTQEDF 382 The following BLAST results are available for this feature:
BLAST of DC900289 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 353
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900289 ID=DC900289; Name=DC900289; organism=Citrus sinensis; type=EST; length=706bpback to top |