DC900289
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: SPAST_CAEEL (Probable spastin homolog spas-1 OS=Caenorhabditis elegans GN=spas-1 PE=1 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 1.849e-13 Identity = 56/164 (34.15%), Postives = 87/164 (53.05%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTM-LELLNQLDGFDSRGD--VKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDV---NLEEFVMTKDEFSGADIKAICTEAGLLALRE-RRMKVTHTD 472 + E+ LF++A + PSI+FIDEID++ +R S + E+ R M E L Q DG S D + VI ATNR LD A+LR R ++I LPD + R+ + + + D + ++ FS +D+ A+C EA ++ +RE R K++ TD Sbjct: 315 DSEKTIRGLFQIARNAQPSIIFIDEIDSILCER----SEKDAEVSRRMKTEFLVQFDGATSSADDRILVIGATNRPHELDDAVLR--RFPKRIMLNLPDEEARKELITKTLKKHNMMDGLISSDIRYIASNTSGFSNSDLVALCKEAAMVPIREIDRSKLSMTD 472
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: PRS2_METTH (Putative 26S protease regulatory subunit homolog MTH_1011 OS=Methanobacterium thermoautotrophicum GN=MTH_1011 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.849e-13 Identity = 47/133 (35.34%), Postives = 73/133 (54.89%), Query Frame = 2 Query: 11 REREDLFRVADDLSPSIVFIDEIDAVGT-KRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIK 406 R+ +L+ +A +PS++FIDE+DA+G +RY + G E+ LL ++DG + V I ATN E LD A+ R + +IEF LPD + R+ + + + M L D +++ V E SG DIK Sbjct: 203 RQIHELYELASKTAPSVIFIDEMDAIGLDRRYQSLRGDVSEVVNA---LLTEMDGINQNWGVVTIGATNNPELLDKAIR--SRFEEEIEFKLPDDEERKLMLEKYIETMPLKVDFPVDKLVKLTREMSGRDIK 330
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: NSF_CAEEL (Vesicle-fusing ATPase OS=Caenorhabditis elegans GN=nsf-1 PE=1 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 2.414e-13 Identity = 45/127 (35.43%), Postives = 75/127 (59.06%), Query Frame = 2 Query: 59 IVFIDEIDAVGTKRYDAHSGGEREIQRTML-ELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRM----TLADDVNLEEFVMTKDEFSGADIKAICTEA 424 I+ DEIDA+ +R G + T++ +LL+++DG + ++ VI TNR + +D ALLRPGR++ ++E LPD R +I +IHT+RM + +V+LE+ FSGA+++ + A Sbjct: 401 IIIFDEIDAICKQR--GSMAGSSSVHDTVVNQLLSKMDGVEQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEVSLPDETGRLQILKIHTARMREYNKMDPNVDLEDISKRTKNFSGAELEGLVRAA 525
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: PEX6_SCHPO (Peroxisomal ATPase pex6 OS=Schizosaccharomyces pombe GN=pex6 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.153e-13 Identity = 48/157 (30.57%), Postives = 86/157 (54.78%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGF--DSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPL-PDIKTRRRIFQIHTSRMTLADDVNLEEFVMT-KDEFSGADIKAICTEAGLLALRERRMKV 460 E E ++F A + SP ++F DE+D++ R ++ G + R + +LL +LD D+ V VI ATNR + LDP+LLRPGR D+ + + +++ + + T L + ++L E F+GAD+ A+C++A L A++ + ++ Sbjct: 731 ESEANVRNVFEKARNSSPCVIFFDELDSIAPHRGNSSDSGN-VMDRVVSQLLAELDSISKDNNKYVFVIGATNRPDLLDPSLLRPGRFDKLVYLGINKSEESKASMLRALTKTFKLDETIDLNEIAKNCHPNFTGADMYALCSDAVLSAIKRKTNEI 886
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: PEX6_PICAN (Peroxisomal biogenesis factor 6 OS=Pichia angusta GN=PEX6 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.153e-13 Identity = 56/152 (36.84%), Postives = 83/152 (54.61%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGTKRYD-AHSGGEREIQRTMLELLNQLDGFDSR--GD-VKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRR-RIFQIHTSRMTLADDVNLEEFVMT-KDEFSGADIKAICTEAGLLAL 439 E E +F+ A D P ++F DE+D+V KR + SGG + R + +LL +LDG GD V V+ ATNR + LD ALLRPGR D+ + + D ++ +I Q T + L V+L T ++GAD A+C++A L A+ Sbjct: 889 ESEANVRRVFQKARDAKPCVIFFDELDSVAPKRGNQGDSGGVMD--RIVSQLLAELDGMSGAEGGDGVFVVGATNRPDLLDEALLRPGRFDKMLYLGIADTHEKQAKIIQALTRKFQLDPSVDLGRIAETCPFTYTGADFYALCSDAMLNAM 1038
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: FIGL1_CAEBR (Fidgetin-like protein 1 OS=Caenorhabditis briggsae GN=figl-1 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.379e-13 Identity = 53/152 (34.87%), Postives = 86/152 (56.58%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVIL--ATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQ--IHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRE 445 E E+ LF VA PS++FIDEID++ + R ++ R I+ E L QLDG ++ D ++++ ATNR + LD A R R +++ LP+ +R +I + + +R + D NLE+ D +SGAD++ +CTEA + +RE Sbjct: 392 EGEKLVRALFSVARLKLPSVIFIDEIDSLLSARSESEHESSRRIKT---EFLVQLDGVNTAPDERLLVLGATNRPQELDEAARR--RFQKRLYIALPEPDSRTQIVENLLRGTRHEITDH-NLEKIRRLTDGYSGADMRQLCTEAAMGPIRE 537
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: PEX6_PICPA (Peroxisomal biogenesis factor 6 OS=Pichia pastoris GN=PEX6 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.025e-13 Identity = 52/151 (34.44%), Postives = 82/151 (54.30%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGF---DSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRR-RIFQIHTSRMTLADDVNLEEFVMT-KDEFSGADIKAICTEAGLLAL 439 E E +F+ A D P +VF DE+D+V KR + E + R + +LL +LDG D V V+ ATNR + LD ALLRPGR D+ + + D ++ +I + + + L V+L++ + F+GAD A+C++A L A+ Sbjct: 895 ESEANVRKVFQRARDAKPCVVFFDELDSVAPKRGN-QGDSEGVMDRIVSQLLAELDGMSGGDGGDGVFVVGATNRPDLLDEALLRPGRFDKMLYLGVSDTHEKQSKIMEALSRKFHLHPSVDLDKVAESCPFTFTGADFYALCSDAMLNAM 1044
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: NSF2_DROME (Vesicle-fusing ATPase 2 OS=Drosophila melanogaster GN=Nsf2 PE=2 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 7.025e-13 Identity = 54/176 (30.68%), Postives = 87/176 (49.43%), Query Frame = 2 Query: 8 EREREDLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTML-ELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRM----TLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRE---------------RRMKVTHTDF 475 E E E+ R+ + I+ DEIDA+ R G + T++ +LL ++DG + ++ VI TNR + +D ALLRPGR++ ++E LP+ + R +I IHT RM +A DV+ E FSGA+++ + A A+ +++VT DF Sbjct: 313 EAEEEEK-RLGPNSGLHIIIFDEIDAICKARGSV--AGNSGVHDTVVNQLLAKIDGVEQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEISLPNEQGRVQILNIHTKRMRDFNKIASDVDNNEIAAKTKNFSGAELEGLVRAAQSTAMNRLIKADSKVHVDPEAMEKLRVTRADF 485
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: SPAST_CAEBR (Probable spastin homolog spas-1 OS=Caenorhabditis briggsae GN=spas-1 PE=3 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 9.175e-13 Identity = 56/164 (34.15%), Postives = 87/164 (53.05%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTM-LELLNQLDGFDSRGD--VKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDV---NLEEFVMTKDEFSGADIKAICTEAGLLALRE-RRMKVTHTD 472 + E+ LF++A + PSI+FIDEID++ +R S + E+ R M E L Q DG S D + VI ATNR LD A+LR R ++I LPD + R+ + + + D + ++ FS +D+ A+C EA ++ +RE R K++ TD Sbjct: 345 DSEKTIRGLFQIARNGQPSIIFIDEIDSILCER----SEKDAEVSRRMKTEFLVQFDGATSSPDDRILVIGATNRPYELDDAVLR--RFPKRIMLNLPDTEARKELITNTLKKHDMMDGLSSSDIRYIASNTSGFSNSDLVALCKEAAMVPVREIHRSKLSVTD 502
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: SPAST_ANOGA (Spastin OS=Anopheles gambiae GN=spas PE=3 SV=5) HSP 1 Score: 73.9442 bits (180), Expect = 9.175e-13 Identity = 54/148 (36.49%), Postives = 80/148 (54.05%), Query Frame = 2 Query: 26 LFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTM-LELLNQLDGFDSRGD---VKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTR----RRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRE 445 LF VA +L PSI+FIDE+D+V ++R S E E R + E L Q DG + + + V+ ATNR + LD A LR R +++ LPD TR RR+ Q S ++ D +L + +SG+D+ A+ +A L +RE Sbjct: 587 LFAVARELQPSIIFIDEVDSVLSER----SSNEHEATRRLKTEFLVQFDGLPANSEADRIVVMAATNRPQELDEAALR--RFPKRVYVTLPDRDTRELLLRRLLQKQGSPLS---DADLAHLAQLTEGYSGSDLTALARDAALEPIRE 725 The following BLAST results are available for this feature:
BLAST of DC900289 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 353
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DC900289 ID=DC900289; Name=DC900289; organism=Citrus sinensis; type=EST; length=706bpback to top |