DC900289
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: SPAST_DICDI (Spastin OS=Dictyostelium discoideum GN=DDB_G0287165 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.198e-12 Identity = 53/143 (37.06%), Postives = 77/143 (53.85%), Query Frame = 2 Query: 26 LFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVIL--ATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQ--IHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALR 442 LF VA PSI+FIDEID++ T+R S R R E+L Q DG + GD +V++ ATNR E LD A LR R+ ++I LP+++TR +I Q + R +L + +SG D+ A+C +A +R Sbjct: 468 LFAVATHFQPSIIFIDEIDSLLTERSSNESEASR---RLKTEILVQFDGARTNGDERVLVMGATNRPEDLDDAALR--RLVKRIYVGLPELETRLQIIQHLLVGQRHSLTKQ-QINSLAEVTQGYSGFDLAALCKDAAYEPIR 604
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: FIGL1_RAT (Fidgetin-like protein 1 OS=Rattus norvegicus GN=Fignl1 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.198e-12 Identity = 50/150 (33.33%), Postives = 79/150 (52.67%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVIL--ATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRI-FQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALR 442 E E+ LF VA P+++FIDEID++ ++R D R I+ E L QLDG + + ++++ ATNR + +D A R R+ +++ PLP+ R++I + + D E V D FSGAD+ +C EA L +R Sbjct: 480 EGEKMVRALFAVARCQQPAVIFIDEIDSLLSQRGDGEHESSRRIK---TEFLVQLDGATTSSEDRILVVGATNRPQEIDEAARR--RLVKRLYIPLPEASARKQIVVNLMSKEQCCLTDEETELVVQQSDGFSGADMTQLCREASLGPIR 624
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: SPAST_DANRE (Spastin OS=Danio rerio GN=spast PE=2 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 1.565e-12 Identity = 51/151 (33.77%), Postives = 80/151 (52.98%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVIL--ATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQ-IHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRE 445 E E+ LF VA +L PSI+FIDEID++ +R + R R E L + DG S GD +V++ ATNR + LD A+LR R ++I LP +TR ++ + + + L + D +SG+D+ ++ +A L +RE Sbjct: 371 EGEKLVRALFAVARELQPSIIFIDEIDSLLCERREGEHDASR---RLKTEFLIEFDGVQSGGDERVLVMGATNRPQELDEAVLR--RFAKRIYVALPTEETRLKLLKNLLSKHRNPLSQKELSQLARLTDGYSGSDLTSLAKDAALGPIRE 516
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: FIGL1_MOUSE (Fidgetin-like protein 1 OS=Mus musculus GN=Fignl1 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.044e-12 Identity = 49/150 (32.67%), Postives = 79/150 (52.67%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVIL--ATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIF-QIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALR 442 E E+ LF VA P+++FIDEID++ ++R D R I+ E L QLDG + + ++++ ATNR + +D A R R+ +++ PLP+ R++I + + D + V D FSGAD+ +C EA L +R Sbjct: 486 EGEKMVRALFAVARCQQPAVIFIDEIDSLLSQRGDGEHESSRRIK---TEFLVQLDGATTSSEDRILVVGATNRPQEIDEAARR--RLVKRLYIPLPEASARKQIVGNLMSKEQCCLSDEETDLVVQQSDGFSGADMTQLCREASLGPIR 630
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: ATD1B_DANRE (ATPase family AAA domain-containing protein 1-B OS=Danio rerio GN=atad1b PE=2 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 2.044e-12 Identity = 48/151 (31.79%), Postives = 80/151 (52.98%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTM-LELLNQLDGFDSRGDVKVIL--ATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRE 445 E ++ +F +A L PSI+FIDEID+ R S + E M + ++ DG D+ + +VI+ ATNR + LD A+LR R+ + P+++ R+ I ++ + V L E D FSG+D++ +C +A LL +R+ Sbjct: 173 ESQKLAAAVFSLAIKLQPSIIFIDEIDSFLRNR----SSSDHEATAMMKAQFMSLWDGLDTDYNCQVIIMGATNRPQDLDSAILR--RMPTRFHINQPNVRQRKDILKLILENENVESAVELSEIAKQTDGFSGSDLREMCRDAALLCVRD 317
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: FIGL1_XENTR (Fidgetin-like protein 1 OS=Xenopus tropicalis GN=fignl1 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.669e-12 Identity = 51/151 (33.77%), Postives = 83/151 (54.97%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVIL--ATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIF--QIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALR 442 E E+ LF VA P+++FIDEID++ ++R + R I+ E L QLDG + D ++++ ATNR + +D A R R+ +++ PLP+ R++I + +LA+ +E V+ D FSGAD+ +C EA L +R Sbjct: 459 EGEKMVRALFTVARCHQPAVIFIDEIDSLLSQRGEGEHESSRRIK---TEFLVQLDGATTSSDDRILVVGATNRPQEIDEAARR--RLVKRLYIPLPEASARKQIVVSLMAKEHCSLAEQ-EVEAIVLQADGFSGADMTQLCREAALGPIR 603
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: SPAST_XENTR (Spastin OS=Xenopus tropicalis GN=spast PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.486e-12 Identity = 51/151 (33.77%), Postives = 82/151 (54.30%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVIL--ATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRM-TLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRE 445 E E+ LF VA +L PSI+FIDE+D++ +R + R R E L + DG S GD +V++ ATNR + LD A+LR R +++ LP+ +TR + + S+ ++ L + + +SG+DI A+ +A L +RE Sbjct: 405 EGEKLVRALFSVARELQPSIIFIDEVDSLLCERREGEHDASR---RLKTEFLIEFDGVQSGGDDRVLVMGATNRPQELDDAVLR--RFTKRVYVSLPNEETRLLLLKNLLSKQGNPLNEKELTQLSRLTEGYSGSDITALAKDAALGPIRE 550
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: PEX1_YEAST (Peroxisomal ATPase PEX1 OS=Saccharomyces cerevisiae GN=PEX1 PE=1 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 3.486e-12 Identity = 46/150 (30.67%), Postives = 74/150 (49.33%), Query Frame = 2 Query: 8 EREREDLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTS---------RMTLADDVNLEEFVMTKDEFSGADIKAICTEAGL 430 E+ +LF A + P I+F DE D++ KR +G R + +LL Q+DG + V ++ AT+R + +D ALLRPGR+D+ + +P R I Q + + L + +L+ FSGAD++ +C A L Sbjct: 776 EQNIRELFERAQSVKPCILFFDEFDSIAPKRGHDSTG---VTDRVVNQLLTQMDGAEGLDGVYILAATSRPDLIDSALLRPGRLDKSVICNIPTESERLDILQAIVNSKDKDTGQKKFALEKNADLKLIAEKTAGFSGADLQGLCYNAYL 922
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: FIGL1_CAEEL (Fidgetin-like protein 1 OS=Caenorhabditis elegans GN=figl-1 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.486e-12 Identity = 52/152 (34.21%), Postives = 86/152 (56.58%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVIL--ATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQ--IHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRE 445 E E+ LF VA PS++FIDEID++ + R ++ R I+ E L QLDG ++ D ++++ ATNR + LD A R R +++ LP+ ++R +I Q + +R + + NLE D +SGAD++ +CTEA + +R+ Sbjct: 392 EGEKLVRALFSVARLKLPSVIFIDEIDSLLSSRSESEHESSRRIK---TEFLVQLDGVNTAPDERLLVLGATNRPQELDEAARR--RFQKRLYIALPEPESRTQIVQNLLVGTRHDITNH-NLERIRELTDGYSGADMRQLCTEAAMGPIRD 537
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: PRS2_METTM (Putative 26S protease regulatory subunit homolog MTH1011 OS=Methanobacterium thermoautotrophicum (strain Marburg / DSM 2133) PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.553e-12 Identity = 49/159 (30.82%), Postives = 82/159 (51.57%), Query Frame = 2 Query: 11 REREDLFRVADDLSPSIVFIDEIDAVG-TKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGL---LALRERRMKVTHTDF 475 R+ +L+ +A +PS++FIDE+DA+G +R+ + G ++ + LL ++DG + V I ATN E LD A+ R + +IEF LP RR + + + M L D ++++ V SG DIK + L LA R++ H ++ Sbjct: 203 RQIHELYELASKTAPSVIFIDEMDAIGLDRRFQSLRG---DVSEVVNALLTEMDGINQNWGVVTIGATNNPELLDNAI--RSRFEEEIEFKLPGDDERRMMLEKYIETMPLDVDFSVDKLVKLTKGMSGRDIKERVLKTALHRALADESPRVEREHIEY 356 The following BLAST results are available for this feature:
BLAST of DC900289 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 353
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900289 ID=DC900289; Name=DC900289; organism=Citrus sinensis; type=EST; length=706bpback to top |