DC900289
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: SPAST_DROAN (Spastin OS=Drosophila ananassae GN=spas PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.767e-12 Identity = 50/145 (34.48%), Postives = 77/145 (53.10%), Query Frame = 2 Query: 26 LFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTM-LELLNQLDGFDSRGD---VKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIF-QIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRE 445 LF VA + PSI+FIDE+D++ ++R S E E R + E L + DG D + V+ ATNR + LD A LR R +++ LPD +TR + ++ + + D L T D +SG+D+ A+ +A L +RE Sbjct: 579 LFAVARHMQPSIIFIDEVDSLLSER----SSNEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALR--RFTKRVYVSLPDEQTRELLLSRLLQKQGSPLDTEALRRLAKTTDGYSGSDLTALAKDAALEPIRE 717
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: MSP1_CAEEL (Mitochondrial sorting homolog OS=Caenorhabditis elegans GN=mspn-1 PE=1 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 7.767e-12 Identity = 43/139 (30.94%), Postives = 69/139 (49.64%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVIL-ATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAIC 415 E ++ +F VA P+I+FIDEID+ D S + + DGF S GD +++ ATNR +D A+LR R+ + + P+P+ K R +I + + + VNL E + SG+D+K +C Sbjct: 160 ESQKLAAAVFSVAQKFQPTIIFIDEIDSF---LRDRQSHDHESTAMMKAQFMTLWDGFSSSGDQIIVMGATNRPRDVDAAILR--RMTARFQVPVPNAKQRSQILNVILRNEKINNTVNLGEIAQAAEGLSGSDLKEVC 293
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: YCF46_GUITH (Uncharacterized AAA domain-containing protein ycf46 OS=Guillardia theta GN=ycf46 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.014e-11 Identity = 47/153 (30.72%), Postives = 76/153 (49.67%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGT-KRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMT--KDEFSGADIKAICTEAGLLALRERR 451 E E + + A+ +SP I++IDEID T ++ SG + + T + L++ + V V+ N I+SL P LLR GR D LPD+K R IF++H ++ + +++ + FSGA+I+ EA +A E R Sbjct: 318 ESEARVRQMIQFAETISPCILWIDEIDKAFTGSNFNNDSGTTKRVFGTFITWLSE-----KKSPVFVVATANNIDSLPPELLRKGRFDEVFFIGLPDLKERECIFKVHLKKIRPKSWSTYDTEILSAQSNRFSGAEIEESIYEAMHIAFNENR 465
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: SPAST_DROPS (Spastin OS=Drosophila pseudoobscura pseudoobscura GN=spas PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.014e-11 Identity = 51/145 (35.17%), Postives = 77/145 (53.10%), Query Frame = 2 Query: 26 LFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTM-LELLNQLDGFDSRGD---VKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIF-QIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRE 445 LF VA L PSI+FIDE+D++ ++R S GE E R + E L + DG D + V+ ATNR + LD A LR R +++ LPD +TR + ++ + + D L D +SG+D+ A+ +A L +RE Sbjct: 597 LFAVARHLQPSIIFIDEVDSLLSER----SSGEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALR--RFTKRVYVSLPDEQTRELLLNRLLQKQGSPLDTDALRRLSKITDGYSGSDLTALAKDAALEPIRE 735
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: SPAST_DROPE (Spastin OS=Drosophila persimilis GN=spas PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.014e-11 Identity = 51/145 (35.17%), Postives = 77/145 (53.10%), Query Frame = 2 Query: 26 LFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTM-LELLNQLDGFDSRGD---VKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIF-QIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRE 445 LF VA L PSI+FIDE+D++ ++R S GE E R + E L + DG D + V+ ATNR + LD A LR R +++ LPD +TR + ++ + + D L D +SG+D+ A+ +A L +RE Sbjct: 597 LFAVARHLQPSIIFIDEVDSLLSER----SSGEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALR--RFTKRVYVSLPDEQTRELLLNRLLQKQGSPLDTDALRRLSKITDGYSGSDLTALAKDAALEPIRE 735
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: MSP1_YEAST (Protein MSP1 OS=Saccharomyces cerevisiae GN=MSP1 PE=1 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.014e-11 Identity = 49/142 (34.51%), Postives = 74/142 (52.11%), Query Frame = 2 Query: 26 LFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTM-LELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTL-ADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRE 445 +F +A+ L P I+FIDEID+ +R S + E+ T+ E + DG + G V +I ATNRI +D A LR R+ ++ LP R +I + L D+ +L+ FSG+D+K +C EA L A +E Sbjct: 177 MFSLANKLQPCIIFIDEIDSFLRER----SSTDHEVTATLKAEFMTLWDGLLNNGRVMIIGATNRINDIDDAFLR--RLPKRFLVSLPGSDQRYKILSVLLKDTKLDEDEFDLQLIADNTKGFSGSDLKELCREAALDAAKE 312
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: SPAST_CHICK (Spastin OS=Gallus gallus GN=SPAST PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.325e-11 Identity = 49/151 (32.45%), Postives = 81/151 (53.64%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVIL--ATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRM-TLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRE 445 E E+ LF VA +L PSI+FIDE+D++ +R + R R E L + DG S G+ ++++ ATNR + LD A+LR R +++ LP+ +TR + + S+ + L + D +SG+D+ A+ +A L +RE Sbjct: 415 EGEKLVRALFAVARELQPSIIFIDEVDSLLCERREGEHDASR---RLKTEFLIEFDGVQSSGEDRILVMGATNRPQELDDAVLR--RFTKRVYVSLPNEETRLILLKNLLSKQGSPLTQKELAQLARMTDGYSGSDLTALVKDAALGPIRE 560
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: VPS4_SCHPO (Suppressor protein of bem1/bed5 double mutants OS=Schizosaccharomyces pombe GN=vps4 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.730e-11 Identity = 48/142 (33.80%), Postives = 77/142 (54.23%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRM-TLADDVNLEEFVMTKDEFSGADIKAICTEA 424 E ER LF +A + PSI+FIDEID++ R + S R I+ L +N + G D G V V+ ATN +LD A+ R R +++I PLP+ R R+F+++ ++ + + +E D +SG+DI + +A Sbjct: 205 ESERLVRQLFEMAREQKPSIIFIDEIDSLCGSRSEGESESSRRIKTEFLVQMNGV-GKDESG-VLVLGATNIPWTLDSAIRR--RFEKRIYIPLPNAHARARMFELNVGKIPSELTSQDFKELAKMTDGYSGSDISIVVRDA 342
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: SPAST_BOVIN (Spastin OS=Bos taurus GN=SPAST PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.730e-11 Identity = 49/151 (32.45%), Postives = 81/151 (53.64%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVIL--ATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQ-IHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRE 445 E E+ LF VA +L PSI+FIDE+D++ +R + R R E L + DG S GD +V++ ATNR + LD A+LR R +++ LP+ +TR + + + + + L + + +SG+D+ A+ +A L +RE Sbjct: 416 EGEKLVRALFAVARELQPSIIFIDEVDSLLCERREGEHDASR---RLKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAVLR--RFTKRVYVSLPNEETRLLLLKNLLCKQGSPLTQKELAQLARMTNGYSGSDLTALAKDAALGPIRE 561
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: VPS4A_RAT (Vacuolar protein sorting-associated protein 4A OS=Rattus norvegicus GN=Vps4a PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.260e-11 Identity = 49/150 (32.67%), Postives = 80/150 (53.33%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVIL-ATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHT-SRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRE 445 E E+ ++LF +A PSI+FIDE+D++ R + S R I+ E L Q+ G + D ++L ATN LD A+ R R +++I PLP+ R ++F++H S D N+ E + +SGADI I ++ + +R+ Sbjct: 204 ESEKLVKNLFELARQHKPSIIFIDEVDSLCGSRNENESEAARRIK---TEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRR--RFEKRIYIPLPEEAARAQMFRLHLGSTPHNLTDANIHELARKTEGYSGADISIIVRDSLMQPVRK 348 The following BLAST results are available for this feature:
BLAST of DC900289 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 353
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900289 ID=DC900289; Name=DC900289; organism=Citrus sinensis; type=EST; length=706bpback to top |