DC900289
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: VPS4A_MOUSE (Vacuolar protein sorting-associated protein 4A OS=Mus musculus GN=Vps4a PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.260e-11 Identity = 49/150 (32.67%), Postives = 80/150 (53.33%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVIL-ATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHT-SRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRE 445 E E+ ++LF +A PSI+FIDE+D++ R + S R I+ E L Q+ G + D ++L ATN LD A+ R R +++I PLP+ R ++F++H S D N+ E + +SGADI I ++ + +R+ Sbjct: 204 ESEKLVKNLFELARQHKPSIIFIDEVDSLCGSRNENESEAARRIK---TEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRR--RFEKRIYIPLPEEAARAQMFRLHLGSTPHNLTDANIHELARKTEGYSGADISIIVRDSLMQPVRK 348
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: VPS4A_HUMAN (Vacuolar protein sorting-associated protein 4A OS=Homo sapiens GN=VPS4A PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.260e-11 Identity = 49/150 (32.67%), Postives = 80/150 (53.33%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVIL-ATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHT-SRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRE 445 E E+ ++LF +A PSI+FIDE+D++ R + S R I+ E L Q+ G + D ++L ATN LD A+ R R +++I PLP+ R ++F++H S D N+ E + +SGADI I ++ + +R+ Sbjct: 204 ESEKLVKNLFELARQHKPSIIFIDEVDSLCGSRNENESEAARRIK---TEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRR--RFEKRIYIPLPEEAARAQMFRLHLGSTPHNLTDANIHELARKTEGYSGADISIIVRDSLMQPVRK 348
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: FIGL1_DROME (Fidgetin-like protein 1 OS=Drosophila melanogaster GN=CG3326 PE=2 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 2.260e-11 Identity = 54/152 (35.53%), Postives = 82/152 (53.95%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGERE-IQRTMLELLNQLDGFDSRGDVKVIL--ATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQ--IHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALR 442 + E+ + LF VA P+I+FIDE+D++ +KR S E E R E L LDG S +++V++ ATNR + LD A+ R R R++ PLP + R++I + IH + L D + E D +SGAD+ +C A + LR Sbjct: 326 DAEKLVKTLFAVAAAHQPAIIFIDEVDSLLSKR----SANENESTLRLKNEFLIHLDGAASNEEIRVLVIGATNRPQELDEAVRR--RFVRRLYVPLPTREARQKIIEKLIHQVKHNL-DVRQVIELAELTDGYSGADVDTLCRYASMAPLR 470
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: SPAST_DROMO (Spastin OS=Drosophila mojavensis GN=spas PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.951e-11 Identity = 50/145 (34.48%), Postives = 79/145 (54.48%), Query Frame = 2 Query: 26 LFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTM-LELLNQLDGF--DSRGD-VKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIF-QIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRE 445 LF VA L PSI+FIDE+D++ ++R S E E R + E L + DG + GD + V+ ATNR + LD A LR R +++ LP+++TR + ++ + + D L D +SG+D+ A+ +A L +RE Sbjct: 574 LFAVARHLQPSIIFIDEVDSLLSER----SSNEHEASRRLKTEFLVEFDGLPGNPEGDRIVVLAATNRPQELDEAALR--RFTKRVYVSLPEVQTRELLLSRLLQKQGSPLDTEALARLAKITDGYSGSDLTALAKDAALEPIRE 712
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: VPS4B_MOUSE (Vacuolar protein sorting-associated protein 4B OS=Mus musculus GN=Vps4b PE=1 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 3.855e-11 Identity = 50/150 (33.33%), Postives = 80/150 (53.33%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGD-VKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHT-SRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRE 445 E E+ ++LF++A + PSI+FIDEID++ R + S R I+ E L Q+ G D + V+ ATN LD A+ R R +++I PLP+ R +F++H S + + +E D +SGADI I +A + +R+ Sbjct: 211 ESEKLVKNLFQLARENKPSIIFIDEIDSLCGSRSENESEAARRIK---TEFLVQMQGVGVDNDGILVLGATNIPWVLDSAIRR--RFEKRIYIPLPEAHARAAMFRLHLGSTQNSLTEADFQELGRKTDGYSGADISIIVRDALMQPVRK 355
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: SPAST_DROYA (Spastin OS=Drosophila yakuba GN=spas PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.855e-11 Identity = 44/141 (31.21%), Postives = 73/141 (51.77%), Query Frame = 2 Query: 26 LFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIF-QIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRE 445 LF VA + PSI+FIDE+D++ ++R + R ++ L + L G + V+ ATNR + LD A LR R +++ LPD +TR + ++ + + D L D +SG+D+ A+ +A L +RE Sbjct: 567 LFAVARHMQPSIIFIDEVDSLLSERSSSEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALR--RFTKRVYVSLPDEQTRELLLNRLLQKQGSPLDTEALRRLAKITDGYSGSDLTALAKDAALEPIRE 705
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: SPAST_DROSE (Spastin OS=Drosophila sechellia GN=spas PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.855e-11 Identity = 44/141 (31.21%), Postives = 73/141 (51.77%), Query Frame = 2 Query: 26 LFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIF-QIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRE 445 LF VA + PSI+FIDE+D++ ++R + R ++ L + L G + V+ ATNR + LD A LR R +++ LPD +TR + ++ + + D L D +SG+D+ A+ +A L +RE Sbjct: 567 LFAVARHMQPSIIFIDEVDSLLSERSSSEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALR--RFTKRVYVSLPDEQTRELLLNRLLQKQGSPLDTEALRRLAKITDGYSGSDLTALAKDAALEPIRE 705
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: SPAST_DROME (Spastin OS=Drosophila melanogaster GN=spas PE=1 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 3.855e-11 Identity = 44/141 (31.21%), Postives = 73/141 (51.77%), Query Frame = 2 Query: 26 LFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIF-QIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRE 445 LF VA + PSI+FIDE+D++ ++R + R ++ L + L G + V+ ATNR + LD A LR R +++ LPD +TR + ++ + + D L D +SG+D+ A+ +A L +RE Sbjct: 567 LFAVARHMQPSIIFIDEVDSLLSERSSSEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALR--RFTKRVYVSLPDEQTRELLLNRLLQKQGSPLDTEALRRLAKITDGYSGSDLTALAKDAALEPIRE 705
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: SPAST_DROGR (Spastin OS=Drosophila grimshawi GN=spas PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.855e-11 Identity = 48/145 (33.10%), Postives = 77/145 (53.10%), Query Frame = 2 Query: 26 LFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTM-LELLNQLDGFDSRGD---VKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIF-QIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRE 445 LF VA + PSI+FIDE+D++ ++R S E E R + E L + DG D + V+ ATNR + LD A LR R +++ LPD++TR + ++ + + D L + +SG+D+ A+ +A L +RE Sbjct: 591 LFAVARHMQPSIIFIDEVDSLLSER----SSNEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALR--RFTKRVYVSLPDVQTRELLLNRLLQKQGSPLDSDALGRLAKITEGYSGSDLTALAKDAALEPIRE 729
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: SPAST_DROER (Spastin OS=Drosophila erecta GN=spas PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.855e-11 Identity = 44/141 (31.21%), Postives = 73/141 (51.77%), Query Frame = 2 Query: 26 LFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIF-QIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRE 445 LF VA + PSI+FIDE+D++ ++R + R ++ L + L G + V+ ATNR + LD A LR R +++ LPD +TR + ++ + + D L D +SG+D+ A+ +A L +RE Sbjct: 567 LFAVARHMQPSIIFIDEVDSLLSERSSSEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALR--RFTKRVYVSLPDEQTRELLLNRLLQKQGSPLDTEALRRLAKITDGYSGSDLTALAKDAALEPIRE 705 The following BLAST results are available for this feature:
BLAST of DC900289 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 353
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900289 ID=DC900289; Name=DC900289; organism=Citrus sinensis; type=EST; length=706bpback to top |