DC900289
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: VPS4_YEAST (Vacuolar protein sorting-associated protein 4 OS=Saccharomyces cerevisiae GN=VPS4 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.034e-11 Identity = 53/158 (33.54%), Postives = 84/158 (53.16%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDE----------FSGADIKAICTEAGLLALRE 445 E E+ + LF +A + PSI+FIDE+DA+ R + S R I+ +L +N + G DS+G V V+ ATN LD A+ R R +R+I PLPD+ R +F+I +V V+TK++ +SG+DI + +A + +R+ Sbjct: 209 ESEKLVKQLFAMARENKPSIIFIDEVDALTGTRGEGESEASRRIKTELLVQMNGV-GNDSQG-VLVLGATNIPWQLDSAIRR--RFERRIYIPLPDLAARTTMFEI---------NVGDTPCVLTKEDYRTLGAMTEGYSGSDIAVVVKDALMQPIRK 353
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: SPAST_IXOSC (Spastin OS=Ixodes scapularis GN=spas PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.575e-11 Identity = 51/154 (33.12%), Postives = 83/154 (53.90%), Query Frame = 2 Query: 2 EREREREDLFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVIL--ATNRIESLDPALLRPGRIDRKIEFPLPDIKTR----RRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRE 445 E E+ LF VA +L PSI+FIDE+D++ ++R D R R E L + DG + + +V++ ATNR + LD A LR R +++ LPD TR ++ + H + ++ AD L+ + +SG+D+ A+ +A L +RE Sbjct: 450 EGEKLVRALFAVARELQPSIIFIDEVDSLLSERKDNEHEATR---RLKTEFLVEFDGLHTGSEERVLVMGATNRPQELDDAALR--RFTKRVYVTLPDHNTRVILLEKLLKKHNNPLS-AD--KLKYLARLTEGYSGSDLTALAKDAALGPIRE 595
BLAST of DC900289 vs. ExPASy Swiss-Prot
Match: KATL2_XENTR (Katanin p60 ATPase-containing subunit A-like 2 OS=Xenopus tropicalis GN=katnal2 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.587e-11 Identity = 48/148 (32.43%), Postives = 82/148 (55.41%), Query Frame = 2 Query: 26 LFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTM-LELLNQLDGFDSRGDVKVILATNRIE-SLDPALLRPGRIDRKIEFPLPDIKTRRRIFQ------IHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRE 445 LF +A +PS +F+DE+++V ++R GGE E R M ELL Q+DG D+ +LA + + LD A+LR R++++I LP + R+ + Q ++S + L D++ D +SG+DI+ +C EA + +R+ Sbjct: 342 LFELARYHAPSTIFLDELESVMSQR-GTGPGGEHEGSRRMKTELLVQMDGLARSDDLVFVLAASNLPWELDYAMLR--RLEKRILVDLPSKEARQAMIQHWLPPVSNSSGVELRTDLDYSTLGAETDGYSGSDIRLVCKEAAMRPVRK 486 The following BLAST results are available for this feature:
BLAST of DC900289 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 353
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900289 ID=DC900289; Name=DC900289; organism=Citrus sinensis; type=EST; length=706bpback to top |