CX043567
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX043567 vs. ExPASy Swiss-Prot
Match: MAD15_ORYSJ (MADS-box transcription factor 15 OS=Oryza sativa subsp. japonica GN=MADS15 PE=1 SV=2) HSP 1 Score: 167.162 bits (422), Expect = 1.061e-40 Identity = 85/125 (68.00%), Postives = 101/125 (80.80%), Query Frame = -2 Query: 463 LLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSIS 837 LLKKAHEISVLCDAEVA IVFS KGKL+EY+TDS M++ILERYERY YAE+ L + E E GNW EY KLKA++E +Q+ KH MGEDL L+LKELQ +EQQ++S LK I SRK+ LML+SIS Sbjct: 28 LLKKAHEISVLCDAEVAAIVFSPKGKLYEYATDSRMDKILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQKCHKHLMGEDLESLNLKELQQLEQQLESSLKHIISRKSHLMLESIS 152
BLAST of CX043567 vs. ExPASy Swiss-Prot
Match: MAD18_ORYSJ (MADS-box transcription factor 18 OS=Oryza sativa subsp. japonica GN=MADS18 PE=1 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 5.103e-35 Identity = 89/221 (40.27%), Postives = 117/221 (52.94%), Query Frame = -2 Query: 187 LLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSISXXXXXXXXXXXXXXXXXXXXXXXXXXLSXXXXXXXXXXQLNHDWNSSNVHLMQ----TLTNSSYQMGGGSGEEDEDTPTGHRANALLPAWMLRHLH 837 LLKKAHEISVLCDA+VALIVFSTKGKL+E+S+ S ME ILERY+RY + ER + E NW EY LK++++ LQ++Q+ +GE L L++KELQ +E Q++ LK IRS+KNQL+ +SIS + SS + TN+S GSGE + N+ LP WMLR H Sbjct: 28 LLKKAHEISVLCDADVALIVFSTKGKLYEFSSHSSMEGILERYQRYSFDERAVLEPNTEDQENWGDEYGILKSKLDALQKSQRQLLGEQLDTLTIKELQQLEHQLEYSLKHIRSKKNQLLFESISELQKKEKSLKNQNNVLQKLMETEKEKNNAIINTNREEQNGATPSTSSPTPVTAPDPIPTTNNSQSQPRGSGESEAQPSPAQAGNSKLPPWMLRTSH 248
BLAST of CX043567 vs. ExPASy Swiss-Prot
Match: MAD18_ORYSI (MADS-box transcription factor 18 OS=Oryza sativa subsp. indica GN=MADS18 PE=2 SV=2) HSP 1 Score: 148.288 bits (373), Expect = 5.103e-35 Identity = 89/221 (40.27%), Postives = 117/221 (52.94%), Query Frame = -2 Query: 187 LLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSISXXXXXXXXXXXXXXXXXXXXXXXXXXLSXXXXXXXXXXQLNHDWNSSNVHLMQ----TLTNSSYQMGGGSGEEDEDTPTGHRANALLPAWMLRHLH 837 LLKKAHEISVLCDA+VALIVFSTKGKL+E+S+ S ME ILERY+RY + ER + E NW EY LK++++ LQ++Q+ +GE L L++KELQ +E Q++ LK IRS+KNQL+ +SIS + SS + TN+S GSGE + N+ LP WMLR H Sbjct: 28 LLKKAHEISVLCDADVALIVFSTKGKLYEFSSHSSMEGILERYQRYSFDERAVLEPNTEDQENWGDEYGILKSKLDALQKSQRQLLGEQLDTLTIKELQQLEHQLEYSLKHIRSKKNQLLFESISELQKKEKSLKNQNNVLQKLMETEKEKNNAIINTNREEQNGATPSTSSPTPVTAPDPIPTTNNSQSQPRGSGESEAQPSPAQAGNSKLPPWMLRTSH 248
BLAST of CX043567 vs. ExPASy Swiss-Prot
Match: CMB1_DIACA (MADS-box protein CMB1 OS=Dianthus caryophyllus GN=CMB1 PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.590e-28 Identity = 64/125 (51.20%), Postives = 89/125 (71.20%), Query Frame = -2 Query: 463 LLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSIS 837 LLKKA+E+SVLCDAEVALIVFS +GKL+E+ + SCM + LERY+R Y + E ++ EY KLKA+++VLQR+ ++ +GEDL +LS KEL+ +E Q+D L+ IRS K Q ML ++ Sbjct: 28 LLKKAYELSVLCDAEVALIVFSNRGKLYEFCSTSCMNKTLERYQRCSYGSLETSQPSKETESSYQ-EYLKLKAKVDVLQRSHRNLLGEDLGELSTKELEQLEHQLDKSLRQIRSIKTQHMLDQLA 151
BLAST of CX043567 vs. ExPASy Swiss-Prot
Match: MADS1_ORYSJ (MADS-box transcription factor 1 OS=Oryza sativa subsp. japonica GN=MADS1 PE=1 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 2.076e-28 Identity = 67/124 (54.03%), Postives = 87/124 (70.16%), Query Frame = -2 Query: 466 LLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSI 837 LLKKA+E+S+LCDAEVALI+FS +G+LFE+S+ SCM + LERY Y + A E E N EY KLK R+E LQ Q++ +GEDL LS+KEL+ +E QI+ LK IRSRKNQ +L + Sbjct: 28 LLKKAYELSLLCDAEVALIIFSGRGRLFEFSSSSCMYKTLERYRSCNYNSQDAAAPENEINYQ---EYLKLKTRVEFLQTTQRNILGEDLGPLSMKELEQLENQIEVSLKQIRSRKNQALLDQL 148
BLAST of CX043567 vs. ExPASy Swiss-Prot
Match: MADS1_ORYSI (MADS-box transcription factor 1 OS=Oryza sativa subsp. indica GN=MADS1 PE=2 SV=2) HSP 1 Score: 126.331 bits (316), Expect = 2.076e-28 Identity = 67/124 (54.03%), Postives = 87/124 (70.16%), Query Frame = -2 Query: 466 LLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSI 837 LLKKA+E+S+LCDAEVALI+FS +G+LFE+S+ SCM + LERY Y + A E E N EY KLK R+E LQ Q++ +GEDL LS+KEL+ +E QI+ LK IRSRKNQ +L + Sbjct: 28 LLKKAYELSLLCDAEVALIIFSGRGRLFEFSSSSCMYKTLERYRSCNYNSQDAAAPENEINYQ---EYLKLKTRVEFLQTTQRNILGEDLGPLSMKELEQLENQIEVSLKQIRSRKNQALLDQL 148
BLAST of CX043567 vs. ExPASy Swiss-Prot
Match: MADS6_ORYSJ (MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica GN=MADS6 PE=1 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 7.890e-28 Identity = 63/124 (50.81%), Postives = 87/124 (70.16%), Query Frame = -2 Query: 466 LLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSI 837 LLKKA+E+SVLCDAEVALI+FS++GKL+E+ + + + LERY+ CY Q N + +W E SKLKA+ E LQR Q+H +GEDL LS+KELQ +E+Q++ L R RK QLM++ + Sbjct: 28 LLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAG-ITKTLERYQHCCY-NAQDSNNALSETQSWYHEMSKLKAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQLMMEQV 149
BLAST of CX043567 vs. ExPASy Swiss-Prot
Match: MADS5_ORYSJ (MADS-box transcription factor 5 OS=Oryza sativa subsp. japonica GN=MADS5 PE=1 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 1.031e-27 Identity = 67/125 (53.60%), Postives = 87/125 (69.60%), Query Frame = -2 Query: 466 LLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQAN-EIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSI 837 LLKKA+E+SVLCDAEVALI+FST+G+LFE+ST SCM + LERY Y +A+ +E + EY KLK R+E LQ Q++ +GEDL LSLKEL+ +E QI+ L IRS KNQ +L + Sbjct: 28 LLKKAYELSVLCDAEVALIIFSTRGRLFEFSTSSCMYKTLERYRSCNYNLNSCEASAALETELSNYQEYLKLKTRVEFLQTTQRNLLGEDLVPLSLKELEQLENQIEISLMNIRSSKNQQLLDQV 152
BLAST of CX043567 vs. ExPASy Swiss-Prot
Match: MADS5_ORYSI (MADS-box transcription factor 5 OS=Oryza sativa subsp. indica GN=MADS5 PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 1.031e-27 Identity = 67/125 (53.60%), Postives = 87/125 (69.60%), Query Frame = -2 Query: 466 LLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQAN-EIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSI 837 LLKKA+E+SVLCDAEVALI+FST+G+LFE+ST SCM + LERY Y +A+ +E + EY KLK R+E LQ Q++ +GEDL LSLKEL+ +E QI+ L IRS KNQ +L + Sbjct: 28 LLKKAYELSVLCDAEVALIIFSTRGRLFEFSTSSCMYKTLERYRSCNYNLNSCEASAALETELSNYQEYLKLKTRVEFLQTTQRNLLGEDLVPLSLKELEQLENQIEISLMNIRSSKNQQLLDQV 152
BLAST of CX043567 vs. ExPASy Swiss-Prot
Match: MADS8_ORYSJ (MADS-box transcription factor 8 OS=Oryza sativa subsp. japonica GN=MADS8 PE=1 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.998e-27 Identity = 64/127 (50.39%), Postives = 90/127 (70.87%), Query Frame = -2 Query: 463 LLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYA--ERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSIS 837 LLKKA+E+SVLCDAEVALI+FS +GKL+E+ + M R LERY+++ Y + +Q E E + EY KLKAR+E LQR Q++ +GEDL L +KEL+ +E+Q+DS L+ IRS + Q ML ++ Sbjct: 28 LLKKAYELSVLCDAEVALIIFSNRGKLYEFCSGQSMTRTLERYQKFSYGGPDTAIQNKENELVQSSRNEYLKLKARVENLQRTQRNLLGEDLGTLGIKELEQLEKQLDSSLRHIRSTRTQHMLDQLT 154 The following BLAST results are available for this feature:
BLAST of CX043567 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 88
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043567 ID=CX043567; Name=CX043567; organism=Citrus sinensis; type=EST; length=838bpback to top |