CX043567
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX043567 vs. ExPASy Swiss-Prot
Match: AG_PANGI (Floral homeotic protein AGAMOUS OS=Panax ginseng GN=AG2 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.211e-21 Identity = 53/125 (42.40%), Postives = 88/125 (70.40%), Query Frame = -2 Query: 466 LLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGN-WTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSI 837 LLKKA+E+SVLCDAEVALIVFST+G+L+EY+ +S ++ +ERY++ C + ++ E N + E SKL+ + +Q+N ++ MGE L L++++L+ +E +++ G+ IRS+KN+L+ I Sbjct: 44 LLKKAYELSVLCDAEVALIVFSTRGRLYEYANNS-VKGTIERYKKAC-TDSPNTSSVSEANAQFYQQEASKLRQEISSIQKNNRNMMGESLGSLTVRDLKGLETKLEKGISRIRSKKNELLFAEI 166
BLAST of CX043567 vs. ExPASy Swiss-Prot
Match: AGL11_ARATH (Agamous-like MADS-box protein AGL11 OS=Arabidopsis thaliana GN=AGL11 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 9.342e-21 Identity = 50/124 (40.32%), Postives = 85/124 (68.55%), Query Frame = -2 Query: 466 LLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSI 837 LLKKA+E+SVLCDAEVALIVFST+G+L+EY+ ++ + +ERY++ C + + E +KL+ +++ +Q + ++ MG+ L+ LS+KEL+ VE +++ + IRS+K++L+L I Sbjct: 28 LLKKAYELSVLCDAEVALIVFSTRGRLYEYANNN-IRSTIERYKKACSDSTNTSTVQEINAAYYQQESAKLRQQIQTIQNSNRNLMGDSLSSLSVKELKQVENRLEKAISRIRSKKHELLLVEI 150
BLAST of CX043567 vs. ExPASy Swiss-Prot
Match: AGL1_ARATH (Agamous-like MADS-box protein AGL1 OS=Arabidopsis thaliana GN=AGL1 PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.220e-20 Identity = 51/125 (40.80%), Postives = 88/125 (70.40%), Query Frame = -2 Query: 466 LLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGN-WTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSI 837 LLKKA+E+SVLCDAEVAL++FST+G+L+EY+ +S + +ERY++ C ++ + E N + E SKL+ ++ +Q + +H +GE L L+ KEL+++E +++ G+ +RS+KN+L++ I Sbjct: 43 LLKKAYELSVLCDAEVALVIFSTRGRLYEYANNS-VRGTIERYKKAC-SDAVNPPSVTEANTQYYQQEASKLRRQIRDIQNSNRHIVGESLGSLNFKELKNLEGRLEKGISRVRSKKNELLVAEI 165
BLAST of CX043567 vs. ExPASy Swiss-Prot
Match: AGL13_ARATH (Agamous-like MADS-box protein AGL13 OS=Arabidopsis thaliana GN=AGL13 PE=2 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 1.594e-20 Identity = 54/124 (43.55%), Postives = 82/124 (66.13%), Query Frame = -2 Query: 466 LLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSI 837 LLKKA+E+SVLCDAEV+LI+FST GKL+E+S + R +ERY Y + L + +E E +KLK + E L R ++ +GEDL +S+KELQ++E+Q++ L R +K Q+M++ + Sbjct: 28 LLKKAYELSVLCDAEVSLIIFSTGGKLYEFSNVG-VGRTIERY--YRCKDNLLDNDTLEDTQGLRQEVTKLKCKYESLLRTHRNLVGEDLEGMSIKELQTLERQLEGALSATRKQKTQVMMEQM 148
BLAST of CX043567 vs. ExPASy Swiss-Prot
Match: MAD27_ORYSJ (MADS-box transcription factor 27 OS=Oryza sativa subsp. japonica GN=MADS27 PE=2 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 6.056e-20 Identity = 49/124 (39.52%), Postives = 84/124 (67.74%), Query Frame = -2 Query: 466 LLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSI 837 + KKA E+++LCDAEV L++FS+ G+L+EYS+ S M+ +++RY + E+Q AN W E + L+ ++ LQ N + MGEDL+ L++KELQS+E Q++ L+ +R++K+ +++ I Sbjct: 28 IFKKAKELAILCDAEVGLMIFSSTGRLYEYSSTS-MKSVIDRYGK-SKDEQQAVANPNSELKFWQREAASLRQQLHNLQENHRQLMGEDLSGLNVKELQSLENQLEISLRSVRTKKDHVLIDEI 149
BLAST of CX043567 vs. ExPASy Swiss-Prot
Match: AGL21_ARATH (Agamous-like MADS-box protein AGL21 OS=Arabidopsis thaliana GN=AGL21 PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.033e-19 Identity = 53/126 (42.06%), Postives = 83/126 (65.87%), Query Frame = -2 Query: 466 LLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQL--QANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSI 837 L+KKA E+++LCDAEV LI+FS+ GKL+++++ S M+ +++RY + ++QL A+E++ W E + L+ + LQ N + MGE L LS+ EL S+E QI+ L+ IR RK QL+ Q I Sbjct: 28 LIKKAKELAILCDAEVGLIIFSSTGKLYDFASSS-MKSVIDRYNKSKIEQQQLLNPASEVK---FWQREAAVLRQELHALQENHRQMMGEQLNGLSVNELNSLENQIEISLRGIRMRKEQLLTQEI 149
BLAST of CX043567 vs. ExPASy Swiss-Prot
Match: AGL5_ARATH (Agamous-like MADS-box protein AGL5 OS=Arabidopsis thaliana GN=AGL5 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.762e-19 Identity = 49/125 (39.20%), Postives = 86/125 (68.80%), Query Frame = -2 Query: 466 LLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGN-WTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSI 837 LLKKA+E+SVLCDAEVAL++FST+G+L+EY+ +S + +ERY++ C ++ E N + E SKL+ ++ +Q +H +GE L L+ KEL+++E +++ G+ +RS+K+++++ I Sbjct: 43 LLKKAYELSVLCDAEVALVIFSTRGRLYEYANNS-VRGTIERYKKAC-SDAVNPPTITEANTQYYQQEASKLRRQIRDIQNLNRHILGESLGSLNFKELKNLESRLEKGISRVRSKKHEMLVAEI 165
BLAST of CX043567 vs. ExPASy Swiss-Prot
Match: MAD21_ORYSJ (MADS-box transcription factor 21 OS=Oryza sativa subsp. japonica GN=MADS21 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 3.005e-19 Identity = 47/126 (37.30%), Postives = 86/126 (68.25%), Query Frame = -2 Query: 466 LLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGN--WTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSI 837 LLKKA+E+++LCDAE+ALIVFS++G+L+E+S + +ERY++ A A I+ N + + E +K++ +++ LQ +H +GE + +++ KEL+S+E +++ G+ IRS+K++L+ I Sbjct: 28 LLKKAYELAILCDAEIALIVFSSRGRLYEFSNVNSTRSTIERYKK-ASASTSGSAPVIDVNSHQYFQQEAAKMRHQIQTLQNANRHLIGESIGNMTAKELKSLENRLEKGISRIRSKKHELLFSEI 152
BLAST of CX043567 vs. ExPASy Swiss-Prot
Match: MAD58_ORYSJ (MADS-box transcription factor 58 OS=Oryza sativa subsp. japonica GN=MADS58 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.948e-18 Identity = 52/125 (41.60%), Postives = 86/125 (68.80%), Query Frame = -2 Query: 466 LLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNG-NWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSI 837 LLKKA+E+SVLCDAEVAL+VFS++G+L+EYS +S E I ERY++ ++ + E N ++ E +KLK ++ LQ + + +G+++ ++ +EL+ +E ++D GL IR+RKN+L+ I Sbjct: 70 LLKKAYELSVLCDAEVALVVFSSRGRLYEYSNNSVKETI-ERYKK-ANSDTSNASTVAEINAQHYQQEAAKLKQQITNLQNSNRTLVGDNITTMNHRELKQLEGRLDKGLGKIRARKNELLCAEI 192
BLAST of CX043567 vs. ExPASy Swiss-Prot
Match: AG_BRANA (Floral homeotic protein AGAMOUS OS=Brassica napus GN=AG1 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.544e-18 Identity = 51/125 (40.80%), Postives = 85/125 (68.00%), Query Frame = -2 Query: 466 LLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGN-WTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSI 837 LLKKA+E+SVLCDAEVALIVFS++G+L+EYS +S ++ +ERY++ ++ + E N + E +KL+ ++ +Q + + MGE + +S KEL+++E ++D + IRS+KN+L+ I Sbjct: 44 LLKKAYELSVLCDAEVALIVFSSRGRLYEYSNNS-VKGTIERYKK-AISDNSNTGSVAEINAQYYQQESAKLRQQIISIQNSNRQLMGETIGSMSPKELRNLEGRLDRSVNRIRSKKNELLFAEI 166 The following BLAST results are available for this feature:
BLAST of CX043567 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 88
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX043567 ID=CX043567; Name=CX043567; organism=Citrus sinensis; type=EST; length=838bpback to top |