CX043567
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX043567 vs. ExPASy Swiss-Prot
Match: AGL15_BRANA (Agamous-like MADS-box protein AGL15 OS=Brassica napus GN=AGL15 PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.323e-18 Identity = 56/124 (45.16%), Postives = 74/124 (59.68%), Query Frame = -2 Query: 466 LLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSI 837 LLKKAHE+SVLCDAEVA+IVFS GKLFE+S+ S M++ L RY Y + N N E LK + +LQ H G+ L LSLKELQ +E+Q++ L +R RK L+ + + Sbjct: 28 LLKKAHELSVLCDAEVAVIVFSKSGKLFEFSSTS-MKKTLLRYGNYQISSDVPGINCKTENQEECTEVDLLKDEISMLQEKHLHMQGKPLNLLSLKELQHLEKQLNFSLISVRERKELLLTKQL 150
BLAST of CX043567 vs. ExPASy Swiss-Prot
Match: AG_ARATH (Floral homeotic protein AGAMOUS OS=Arabidopsis thaliana GN=AG PE=1 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 5.668e-18 Identity = 50/125 (40.00%), Postives = 85/125 (68.00%), Query Frame = -2 Query: 466 LLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGN-WTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSI 837 LLKKA+E+SVLCDAEVALIVFS++G+L+EYS +S ++ +ERY++ ++ + E N + E +KL+ ++ +Q + + MGE + +S KEL+++E +++ + IRS+KN+L+ I Sbjct: 44 LLKKAYELSVLCDAEVALIVFSSRGRLYEYSNNS-VKGTIERYKK-AISDNSNTGSVAEINAQYYQQESAKLRQQIISIQNSNRQLMGETIGSMSPKELRNLEGRLERSITRIRSKKNELLFSEI 166
BLAST of CX043567 vs. ExPASy Swiss-Prot
Match: SOC1_ARATH (MADS-box protein SOC1 OS=Arabidopsis thaliana GN=SOC1 PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 9.668e-18 Identity = 48/124 (38.71%), Postives = 80/124 (64.52%), Query Frame = -2 Query: 466 LLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSI 837 LLKKA E+SVLCDAEV+LI+FS KGKL+E+++ S M+ ++RY R+ + E + E + + ++E L+ +++ +GE + S++ELQ +EQQ++ +K IR+RK Q+ + I Sbjct: 28 LLKKAFELSVLCDAEVSLIIFSPKGKLYEFAS-SNMQDTIDRYLRHTKDRVSTKPVSEENMQHLKYEAANMMKKIEQLEASKRKLLGEGIGTCSIEELQQIEQQLEKSVKCIRARKTQVFKEQI 150
BLAST of CX043567 vs. ExPASy Swiss-Prot
Match: M17_MAIZE (MADS-box protein ZMM17 OS=Zea mays GN=M17 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 9.668e-18 Identity = 47/124 (37.90%), Postives = 80/124 (64.52%), Query Frame = -2 Query: 466 LLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSI 837 LLKKA+E++VLCDA V +++FS+ GK+FEY + +C R E E+Y +A EI + LE +++K ME L+ + + G+DL+ L+L ++ +EQQ++ + +R+RK+QL+ Q + Sbjct: 28 LLKKANELAVLCDARVGVVIFSSTGKMFEYCSPACSLR--ELIEQYQHATNS-HFEEINHDQQILLEMTRMKNEMEKLETGIRRYTGDDLSSLTLDDVSDLEQQLEYSVSKVRARKHQLLNQQL 148
BLAST of CX043567 vs. ExPASy Swiss-Prot
Match: AP32_ASAEU (MADS-box protein AeAP3-2 (Fragment) OS=Asarum europaeum GN=AP3-2 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 9.668e-18 Identity = 47/127 (37.01%), Postives = 79/127 (62.20%), Query Frame = -2 Query: 466 LLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSC-MERILERYERYCYAERQLQAN--EIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSI 837 LLKKA E+++LCDA++ +I+FS+ GK+FE+S+ M I++RY++ L N + N E +++K ++ LQ +HF GEDL L++ E+ +EQQ++ + +RSRK QL+ Q + Sbjct: 3 LLKKARELAILCDAQLGVIIFSSSGKMFEFSSPPISMREIIDRYQK-------LSGNCAPVYDNQQVYCEITRMKNEIDKLQATMRHFAGEDLTSLTMNEMLQLEQQLEISVNKVRSRKEQLLQQQL 122
BLAST of CX043567 vs. ExPASy Swiss-Prot
Match: MADS3_ORYSJ (MADS-box transcription factor 3 OS=Oryza sativa subsp. japonica GN=MADS3 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.649e-17 Identity = 50/126 (39.68%), Postives = 86/126 (68.25%), Query Frame = -2 Query: 466 LLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNG-NWTLEYSKLKARMEVLQR-NQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSI 837 LLKKA+E+SVLCDAEVALIVFS++G+L+EY+ +S ++ +ERY++ ++ E N ++ E SKL+ ++ LQ N + +G+ + +SL++L+ VE +++ G+ IR+RKN+L+ + Sbjct: 28 LLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS-VKSTVERYKK-ANSDTSNSGTVAEVNAQHYQQESSKLRQQISSLQNANSRTIVGDSINTMSLRDLKQVENRLEKGIAKIRARKNELLYAEV 151
BLAST of CX043567 vs. ExPASy Swiss-Prot
Match: MAD57_ORYSJ (MADS-box transcription factor 57 OS=Oryza sativa subsp. japonica GN=MADS57 PE=2 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 1.649e-17 Identity = 48/124 (38.71%), Postives = 78/124 (62.90%), Query Frame = -2 Query: 466 LLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSI 837 LLKKA E+S+LCDAEV L+VFS+ G+L+E+S+ + M+ +++RY E L N W E + L+ ++ LQ + K MGE+L+ L +++LQ +E +++ L+ IR RK+ L+ I Sbjct: 28 LLKKAKELSILCDAEVGLVVFSSTGRLYEFSSTN-MKTVIDRYTN--AKEELLGGNATSEIKIWQREAASLRQQLHNLQESHKQLMGEELSGLGVRDLQGLENRLEISLRNIRMRKDNLLKSEI 148
BLAST of CX043567 vs. ExPASy Swiss-Prot
Match: MAD56_ORYSJ (MADS-box transcription factor 56 OS=Oryza sativa subsp. japonica GN=MADS56 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.069e-16 Identity = 46/127 (36.22%), Postives = 83/127 (65.35%), Query Frame = -2 Query: 463 LLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYC--YAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSIS 837 LLKKA E+SVLCDAEVALIVFS +G+L+E+++ +++ ++RY+ Y + + +I+ + TL +K ++E L +++ +GE+L S++EL+ +E +++ L IR +K +L+ Q I+ Sbjct: 28 LLKKAFELSVLCDAEVALIVFSPRGRLYEFASAPSLQKTIDRYKAYTKDHVNNKTIQQDIQQVKDDTLGLAK---KLEALDESRRKILGENLEGFSIEELRGLEMKLEKSLHKIRLKKTELLEQQIA 151
BLAST of CX043567 vs. ExPASy Swiss-Prot
Match: MAD25_ORYSJ (MADS-box transcription factor 25 OS=Oryza sativa subsp. japonica GN=MADS25 PE=2 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 1.069e-16 Identity = 43/124 (34.68%), Postives = 81/124 (65.32%), Query Frame = -2 Query: 466 LLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSI 837 L+KKA E+++LCDA+V LIVFS G+L+++S+ S M+ I+ERY+ E N + W E + L+ +++ L N + +GE++++ ++++LQ ++ Q++ L IR++K+QL+ + I Sbjct: 28 LMKKARELAILCDADVGLIVFSCTGRLYDFSSSS-MKSIIERYQE-AGEEHCRLLNPMSEAKFWQREVTTLRQQVQNLHHNNRQLLGEEISNFTVRDLQLLQNQVEMSLHSIRNKKDQLLAEEI 149
BLAST of CX043567 vs. ExPASy Swiss-Prot
Match: MAD29_ORYSJ (MADS-box transcription factor 29 OS=Oryza sativa subsp. japonica GN=MADS29 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.396e-16 Identity = 43/125 (34.40%), Postives = 79/125 (63.20%), Query Frame = -2 Query: 466 LLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSC-MERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSI 837 LLKKA+E++VLCDA V +++FS+ GK+FEY + +C + ++E Y+ EI + +E ++++ ME L + F G+DL++L+L ++ +EQQ++ + +R+RK+QL+ Q + Sbjct: 28 LLKKANELAVLCDARVGVVIFSSTGKMFEYCSPTCSLRELIEHYQ----TVTNTHFEEINHDQQIFVEMTRMRNEMEKLDGGIRRFTGDDLSNLTLADINDLEQQLEFSVTKVRARKHQLLNQQL 148 The following BLAST results are available for this feature:
BLAST of CX043567 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 88
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043567 ID=CX043567; Name=CX043567; organism=Citrus sinensis; type=EST; length=838bpback to top |