CX043563
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043563 vs. ExPASy Swiss-Prot
Match: NORM_RHILO (Probable multidrug resistance protein norM OS=Rhizobium loti GN=norM PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.737e-11 Identity = 54/209 (25.84%), Postives = 86/209 (41.15%), Query Frame = -2 Query: 127 ILKLALPSAAMVCLEYWAFEILVFLAGLMPNSELTTSLIAMCVNTESVAYMITYGLSAAASTRVSNELGAGNPDQAKNAMXXXXXXXXXXXXXXXXXLGFGHNIWAGFFSN-----SPEIIKEFASLTPLLALSITLDSVQGVLSGVARGCGWQHLAVWANLATFYFIGMPIAAILGFKLSLYVKGLWIGLICGLFCQASSLLLITLRR 738 +L+L LP A ++ E F L GL+ L IA + S+++M+ GL+ A + RV GAGNP+ A + ++ F + + +I S AL D Q V +G+ RG + + ++ +G+P+ +L F + G+WIGL GL A+ LL LRR Sbjct: 250 LLRLGLPIAGILAFEVTIFNAAALLMGLIDADSLAAHAIA--IQIASISFMVPLGLNQAVTVRVGLAHGAGNPEGVSRAGWTAFVIGVSFMALMGLVMVLWPHLLISAFIDLANPANARVIALAVSFLVFAALFQVFDGAQAVAAGMLRGLHDTKVPMIYAAIGYWGVGLPLGVLLAFHFGFHGVGIWIGLSSGLAVVAALLLTRWLRR 456
BLAST of CX043563 vs. ExPASy Swiss-Prot
Match: NORM_VIBF1 (Multidrug resistance protein norM OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=norM PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.668e-11 Identity = 61/226 (26.99%), Postives = 100/226 (44.25%), Query Frame = -2 Query: 106 ILTILKLALPSAAMVCLEYWAFEILVFLAGLMPNSELTTSLIA---MCVNTESVAYMITYGLSAAASTRVSNELGAGNPDQAKNAMXXXXXXXXXXXXXXXXXLGFGHNIWAGFFSNSPEIIKEFASLTPLLALSITLDSVQGVLSGVARGCGWQHLAVWANLATFYFIGMPIAAILG----FKLSLYVKGLWIGLICGLFCQASSLLLITLRRKW-----TKVDM 747 I + KL LP A + FE+ +F A + S L ++++A + +N S+ +MI ++ A S RV ++LG + D AK A A +S++ E+I SL L A+ D+VQ V +G RG + +++ +G+P +LG + + V G W G I GL +S +L+T R W T++DM Sbjct: 234 IYRLFKLGLPVALSIF-----FEVTLFAAVALLVSPLGSTVVAAHQVAINFSSLIFMIPMSIAVAVSIRVGHKLGEKDLDGAKVASYCGLAFGLLMACCTAILTLIFREQIAYLYSDNQEVITLAVSLMLLAAIYQCTDAVQVVAAGALRGYKDMNAIFKCTFVSYWIVGLPSGYVLGMTDWIREPMGVYGFWFGFIGGL---TTSAILLTCRLLWLQRNPTRIDM 451 The following BLAST results are available for this feature:
BLAST of CX043563 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX043563 ID=CX043563; Name=CX043563; organism=Citrus sinensis; type=EST; length=793bpback to top |