CX043562

Overview
NameCX043562
Unique NameCX043562
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length868
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043562 vs. ExPASy Swiss-Prot
Match: S47A1_HUMAN (Multidrug and toxin extrusion protein 1 OS=Homo sapiens GN=SLC47A1 PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.239e-23
Identity = 68/219 (31.05%), Postives = 108/219 (49.32%), Query Frame = 2
Query:  188 EEAKNQVVFSLPMILANVFYYAIPLVSVMSAGHLGQLELAGATLANSWATVTGFAFMIGLSGALETLCGQGFGAKHYRMLGIYLQAXXXXXXXXXXXXXXXXXYTEPILILLHQDPSISKQAALYMKYLIPGLVAYGVTQNILRFLQTQSIVIPLIFFSALPMAIHFGIAYAFVYLTSLGFKGASLAASVSLWISMLMLVTYVLCAKKFEHTWEGFSFE 844
            EE +  +V + P  L  +  + I  +S +  GHLG+LEL   TLA +   VTG +   GLS A +TL  Q +G+++ + +G+ LQ                   T+ IL+L  QDP +S+    Y+   IP L A  +    +++L  Q IV+P I        ++    Y F++   LG  G++LA  +S +   L+L  Y+L  K  + TW G+S E
Sbjct:   33 EELRALLVLAGPAFLVQLMVFLISFISSVFCGHLGKLELDAVTLAIAVINVTGVSVGFGLSSACDTLISQTYGSQNLKHVGVILQRSALVLLLCCFPCWALFLNTQHILLLFRQDPDVSRLTQTYVTIFIPALPATFLYMLQVKYLLNQGIVLPQIVTGVAANLVNALANYLFLHQLHLGVIGSALANLISQYTLALLLFLYILGKKLHQATWGGWSLE 251          
BLAST of CX043562 vs. ExPASy Swiss-Prot
Match: YAO6_SCHPO (Uncharacterized transporter C11D3.06 OS=Schizosaccharomyces pombe GN=SPAC11D3.06 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.618e-23
Identity = 68/218 (31.19%), Postives = 108/218 (49.54%), Query Frame = 2
Query:  185 LEEAKNQVVFSLPMILANVFYYAIPLVSVMSAGHLGQLELAGATLANSWATVTGFAFMIGLSGALETLCGQGFGAKHYRMLGIYLQAXXXXXXXXXXXXXXXXXYTEPILILLHQDPSISKQAALYMKYLIPGLVAYGVTQNILRFLQTQSIVIPLIFFSALPMAIHFGIAYAFVYLTSLGFKGASLAASVSLWISMLMLVTYVLCAKKFEHTWEGFS 838
            L E K  ++ S P+IL      ++   SV+  G LG  EL+ A  A  +A  TG+   +G + A +TL    +GA   + LGI LQ                  Y++PILI LHQ P +++ +  +++YLIPG + Y   + + +FLQTQ I     +   +   ++  + +  V+   LG KGA LA  +S W+S ++L  Y    K  E  W G++
Sbjct:    5 LTEVKYLLINSAPVILGYALQNSLQTSSVIVTGRLGPSELSVAAFAYMFAMSTGWLIALGGTTAFDTLGSNLWGAGKKQELGILLQTGFIVLSILYLPICLVWWYSKPILIFLHQTPELAEASQKFLRYLIPGGLGYVCFELLKKFLQTQEITRAGSYILLVTSPLNVALNFLLVHYYGLGLKGAPLATGLSYWLSFILLTQYAKYVKGAE-AWNGWN 221          
BLAST of CX043562 vs. ExPASy Swiss-Prot
Match: S47A1_PONAB (Multidrug and toxin extrusion protein 1 OS=Pongo abelii GN=SLC47A1 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.113e-23
Identity = 68/219 (31.05%), Postives = 108/219 (49.32%), Query Frame = 2
Query:  188 EEAKNQVVFSLPMILANVFYYAIPLVSVMSAGHLGQLELAGATLANSWATVTGFAFMIGLSGALETLCGQGFGAKHYRMLGIYLQAXXXXXXXXXXXXXXXXXYTEPILILLHQDPSISKQAALYMKYLIPGLVAYGVTQNILRFLQTQSIVIPLIFFSALPMAIHFGIAYAFVYLTSLGFKGASLAASVSLWISMLMLVTYVLCAKKFEHTWEGFSFE 844
            EE +  +V + P  L  +  + I  +S +  GHLG+LEL   TLA +   VTG +   GLS A +TL  Q +G+++ + +G+ LQ                   T+ IL+L  QDP +S+    Y+   IP L A  +    +++L  Q IV+P I        ++    Y F++   LG  G++LA  +S +   L+L  Y+L  K  + TW G+S E
Sbjct:   33 EELRALLVLAGPAFLVQLMVFLISFISSVFCGHLGKLELDAVTLAIAVINVTGVSVGFGLSSACDTLISQTYGSQNLKHVGVILQRSALILLLCCFPCWALFLNTQHILLLFRQDPDVSRLTQTYVTIFIPALPATFLYMLQVKYLLNQGIVLPQIVTGVAANLVNALANYLFLHQLHLGAIGSALANLISQYTLALLLFFYILGKKLHQATWGGWSLE 251          
BLAST of CX043562 vs. ExPASy Swiss-Prot
Match: YD338_YEAST (Uncharacterized transporter YDR338C OS=Saccharomyces cerevisiae GN=YDR338C PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.282e-20
Identity = 61/223 (27.35%), Postives = 112/223 (50.22%), Query Frame = 2
Query:  191 EAKNQVVFSLPMILANVFYYAIPLVSVMSAGHLGQLELAGATLANSWATVTGFAFMIGLSGALETLCGQGFGAKHYRMLGIYLQAXXXXXXXXXXXXXXXXXYTEPILILLHQDPSISKQAALYMKYLIPGLVAYGVTQNILRFLQTQSIVIPLIFFSALPMAIHFGIAYAFVY--LTSLGFKGASLAASVSLWISMLMLVTYVLCAKKFEHTWEGFSFESFS 853
            EA+    +S P+I   +     P+V  ++ GHLG+ ELA  +LA+  + +T  A   G++ +L+TLC Q +G+  +  +G++LQ                  Y+EP+L  +  +  +    + +++ LI G  AY   +N+ RFLQ Q I    I+   +   ++  ++Y  V+     +GF GA++A  ++ W+   +L+ Y L        W GFS ++F+
Sbjct:  228 EARVLASYSFPLIFTFLLEQIFPMVCSLTVGHLGKNELAAVSLASMTSNIT-LAIFEGIATSLDTLCPQAYGSGRFYSVGVHLQRCIAFSLVIYIPFAVMWWYSEPLLSYIIPEKELINLTSRFLRVLILGAPAYIFFENLKRFLQAQGIFDAGIYVLTICAPLNVLVSYTLVWNKYIGVGFIGAAIAVVLNFWLMFFLLLFYALYIDG-RKCWGGFSRKAFT 448          
BLAST of CX043562 vs. ExPASy Swiss-Prot
Match: YL47_SCHPO (Uncharacterized transporter C323.07c OS=Schizosaccharomyces pombe GN=SPAC323.07c PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.361e-20
Identity = 59/208 (28.37%), Postives = 96/208 (46.15%), Query Frame = 2
Query:  221 PMILANVFYYAIPLVSVMSAGHLGQLELAGATLANSWATVTGFAFMIGLSGALETLCGQGFGAKHYRMLGIYLQAXXXXXXXXXXXXXXXXXYTEPILILLHQDPSISKQAALYMKYLIPGLVAYGVTQNILRFLQTQSIVIPLIFFSALPMAIHFGIAYAFVYLTSL--GFKGASLAASVSLWISMLMLVTYVLCAKKFEHTWEGFS 838
            P ++A +   +    +V + GHLG+  LA ++L+   A ++ F+   G+  +L+TL  Q FGA     + IYLQ                    E ILI LHQDP ++     YM+  I     Y V + + R+LQ Q I  P+ +       ++  + Y  V+  ++  GF GA +A + + W   + L+ Y+ C       W GFS
Sbjct:  100 PTVIAYLLQSSEQFSTVFTLGHLGKEYLAASSLSTMTAAISAFSIFQGVISSLDTLATQAFGANKPYNVAIYLQRCLLILAVLHIPVALIWLNLEHILIFLHQDPMVAHLCGRYMRVFILAAPGYAVFEALKRYLQAQGIFTPITYVLCFAAPLNILLNYLLVWHPTIGFGFLGAPVAVATTFWFQSICLILYI-CFSSTPIPWPGFS 306          
BLAST of CX043562 vs. ExPASy Swiss-Prot
Match: S47A2_HUMAN (Multidrug and toxin extrusion protein 2 OS=Homo sapiens GN=SLC47A2 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.490e-18
Identity = 63/242 (26.03%), Postives = 104/242 (42.98%), Query Frame = 2
Query:  221 PMILANVFYYAIPLVSVMSAGHLGQLELAGATLANSWATVTGFAFMIGLSGALETLCGQGFGAKHYRMLGIYLQAXXXXXXXXXXXXXXXXXYTEPILILLHQDPSISKQAALYMKYLIPGLVAYGVTQNILRFLQT------------------------------------QSIVIPLIFFSALPMAIHFGIAYAFVYLTSLGFKGASLAASVSLWISMLMLVTYVLCAKKFEHTWEGFS 838
            P+ L  V  + I +VS +  GHLG++ELA  TLA ++  V G +  +GLS A +TL  Q FG+ + + +G+ LQ                   T+ IL+L  QDP +S+    Y+   IPGL    +   + ++LQ                                     Q I  P +    +   ++    YA V + +LG +G++ A  +S +   + L+ Y++  K    TW G+S
Sbjct:   40 PLFLFQVLTFMIYIVSTVFCGHLGKVELASVTLAVAFVNVCGVSVGVGLSSACDTLMSQSFGSPNKKHVGVILQRGALVLLLCCLPCWALFLNTQHILLLFRQDPDVSRLTQDYVMIFIPGLPVIFLYNLLAKYLQNQGWLKGQEEESPFQTPGLSILHPSHSHLSRASFHLFQKITWPQVLSGVVGNCVNGVANYALVSVLNLGVRGSAYANIISQFAQTVFLLLYIVLKKLHLETWAGWS 281          
BLAST of CX043562 vs. ExPASy Swiss-Prot
Match: YHJ2_YEAST (Uncharacterized transporter YHR032W OS=Saccharomyces cerevisiae GN=YHR032W PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.016e-17
Identity = 59/212 (27.83%), Postives = 98/212 (46.23%), Query Frame = 2
Query:  215 SLPMILANVFYYAIPLVSVMSAGHLGQLELAGATLANSWATVTGFAFMIGLSGALETLCGQGFGAKHYRMLGIYLQ-AXXXXXXXXXXXXXXXXXYTEPILILLHQDPSISKQAALYMKYLIPGLVAYGVTQNILRFLQTQSI--VIPLIFFSALPMAIHFGIAYAFVYLTSLGFKGASLAASVSLWISMLMLVTYVLCAKKFEH---TWEG 832
            +LP+I   +   ++ L S+ S  HLG  EL G TL +  A +TG A + GL   L+TLC Q +GAK+Y ++G+ +Q                   ++E IL L+  +  +   AA Y++    G+  + + +   RFLQ Q I     ++ F   P+         +     +G+ GA L+  ++ W+  L L+ Y +  K  E     W G
Sbjct:  172 ALPLIFTFILQNSLSLASIFSVSHLGTKELGGVTLGSMTANITGLAAIQGLCTCLDTLCAQAYGAKNYHLVGVLVQRCAVITILAFLPMMYVWFVWSEKILALMIPERELCALAANYLRVTAFGVPGFILFECGKRFLQCQGIFHASTIVLFVCAPLNALMNYLLVWNDKIGIGYLGAPLSVVINYWLMTLGLLIYAMTTKHKERPLKCWNG 383          
The following BLAST results are available for this feature:
BLAST of CX043562 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
S47A1_HUMAN1.239e-2331.05Multidrug and toxin extrusion protein 1 OS=Homo sa... [more]
YAO6_SCHPO1.618e-2331.19Uncharacterized transporter C11D3.06 OS=Schizosacc... [more]
S47A1_PONAB2.113e-2331.05Multidrug and toxin extrusion protein 1 OS=Pongo a... [more]
YD338_YEAST1.282e-2027.35Uncharacterized transporter YDR338C OS=Saccharomyc... [more]
YL47_SCHPO6.361e-2028.37Uncharacterized transporter C323.07c OS=Schizosacc... [more]
S47A2_HUMAN3.490e-1826.03Multidrug and toxin extrusion protein 2 OS=Homo sa... [more]
YHJ2_YEAST1.016e-1727.83Uncharacterized transporter YHR032W OS=Saccharomyc... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_11H09_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-11H09-O17-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043562 ID=CX043562; Name=CX043562; organism=Citrus sinensis; type=EST; length=868bp
TTTCGCCATCAAAGAATAACAACACACGAGAGTTTGACTCTTCTAAGCAT
TTGGCTAAACGATGTCGGCAAACACCGATTTAGACAATACGACGTCGCCT
TTGTTAGAGGCTGGTGGTGATGATGATCACGGAGAAGAAGAAGCAACCAG
CAGCAGGAGGCGGTGGTGGAAACGAGTTTTGGACTTGGAAGAGGCCAAGA
ATCAAGTGGTGTTTTCGCTCCCCATGATTCTTGCTAATGTTTTTTATTAT
GCAATTCCTTTGGTTTCTGTCATGTCTGCTGGCCACCTTGGCCAGCTTGA
GCTTGCTGGTGCCACACTTGCCAACTCTTGGGCCACCGTCACAGGATTCG
CTTTCATGATAGGATTAAGTGGAGCACTTGAAACACTTTGCGGTCAAGGA
TTTGGTGCAAAACATTACAGGATGTTGGGAATATATCTGCAAGCATCTTG
GATTACATCATTATTTTTCTCAATCATCATATCTTTCTTGTGGATCTACA
CAGAACCAATACTTATTTTACTTCATCAAGATCCCAGCATATCAAAACAA
GCAGCTCTCTACATGAAGTATCTTATTCCCGGTCTAGTTGCATACGGGGT
TACACAGAACATCCTAAGGTTTCTTCAGACACAATCCATAGTCATTCCAT
TGATCTTCTTCTCAGCTCTCCCAATGGCAATTCATTTTGGCATTGCATAT
GCTTTTGTATATTTGACATCCCTTGGTTTTAAGGGAGCTTCACTAGCAGC
TTCAGTTTCGTTATGGATATCGATGCTTATGCTGGTAACTTATGTCCTTT
GTGCAAAGAAGTTTGAGCATACGTGGGAAGGATTTTCTTTTGAATCATTC
AGTTTCATCCTCACCATC
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