DC900270
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_PSEA7 (Elongation factor Tu OS=Pseudomonas aeruginosa (strain PA7) GN=tuf1 PE=3 SV=2) HSP 1 Score: 209.149 bits (531), Expect = 2.633e-53 Identity = 104/157 (66.24%), Postives = 121/157 (77.07%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 V++VG+K T T TGVEMF+K LDE AG+NVG+LLRG ++ D++RG VLAKPGTI PHTKF VYVL KEEGGRH+PFF GYRPQFY RTTDVTG + E +MVMPGD IKMVV LI P+A E G+RFAIREGG+TVGAGV+ IIE Sbjct: 246 VEIVGIKATTKTTCTGVEMFRKLLDEGRAGENVGILLRGTKREDVERGQVLAKPGTIKPHTKFECEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGNC-----ELPEGVEMVMPGDNIKMVVTLIAPIAMEDGLRFAIREGGRTVGAGVVAKIIE 397
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_IDILO (Elongation factor Tu OS=Idiomarina loihiensis GN=tuf1 PE=3 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 2.633e-53 Identity = 100/156 (64.10%), Postives = 125/156 (80.13%), Query Frame = 3 Query: 9 DLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 ++VG+K+T TVTGVEMF+K LDE AG+N+G LLRG ++ D++RG VLAKPGTITPHTKF A VYVL K+EGGRH+PFF GYRPQFY RTTDVTG V + E +MVMPGD +K VV+LI P+A ++G+RFAIREGG+TVGAGV+ I++ Sbjct: 244 EIVGMKDTTKTTVTGVEMFRKLLDEGRAGENIGALLRGTKRDDVERGQVLAKPGTITPHTKFEAEVYVLSKDEGGRHTPFFKGYRPQFYFRTTDVTGAV-----ELPEGVEMVMPGDNLKFVVDLIAPIAMDEGLRFAIREGGRTVGAGVVSKIMD 394
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_HAEDU (Elongation factor Tu OS=Haemophilus ducreyi GN=tufA PE=3 SV=3) HSP 1 Score: 209.149 bits (531), Expect = 2.633e-53 Identity = 103/157 (65.61%), Postives = 124/157 (78.98%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 V++VG+KET TVTGVEMF+K LDE AG+NVG LLRG ++ +I+RG VLAKPGTITPHT F + VYVL KEEGGRH+PFF GYRPQFY RTTDVTG + + E +MVMPGD IKM V LI P+A ++G+RFAIREGG+TVGAGV+ II+ Sbjct: 243 VEIVGIKETTKTTVTGVEMFRKLLDEGRAGENVGALLRGTKREEIERGQVLAKPGTITPHTDFESEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIKMTVSLIHPIAMDEGLRFAIREGGRTVGAGVVAKIIK 394
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_GEOMG (Elongation factor Tu OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=tuf1 PE=3 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 2.633e-53 Identity = 102/157 (64.97%), Postives = 124/157 (78.98%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 V++VG+K T TVTGVEMF+K LDE AGDN+G LLRGV++ DI+RG VLA+PG+ITPHTKF A Y+L KEEGGRH+PFF GYRPQFY RTTDVTG V D ++MVMPGD + + V LI P+A ++G+RFAIREGG+TVGAGV+ SIIE Sbjct: 245 VEIVGIKTTTKTTVTGVEMFRKLLDEGRAGDNIGALLRGVKREDIERGQVLARPGSITPHTKFKAEAYILTKEEGGRHTPFFNGYRPQFYFRTTDVTGIV-----DLPAGTEMVMPGDNVAVTVNLITPIAMDEGLRFAIREGGRTVGAGVVSSIIE 396
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_COXBU (Elongation factor Tu OS=Coxiella burnetii GN=tufA PE=1 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 2.633e-53 Identity = 99/157 (63.06%), Postives = 126/157 (80.25%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 +++VG+K+T T TGVEMF+K LDE AGDNVG+LLRG ++ +++RG VLAKPG+ITPH KF A +YVL KEEGGRH+PF GYRPQFY RTTDVTG++ S+ E +MVMPGD +K+ VELI PVA ++G+RFA+REGG+TVGAGV+ IIE Sbjct: 245 IEIVGIKDTTKTTCTGVEMFRKLLDEGQAGDNVGILLRGTKREEVERGQVLAKPGSITPHKKFEAEIYVLSKEEGGRHTPFLQGYRPQFYFRTTDVTGQLLSL----PEGIEMVMPGDNVKVTVELIAPVAMDEGLRFAVREGGRTVGAGVVTKIIE 397
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_COXBR (Elongation factor Tu OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=tuf1 PE=3 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 2.633e-53 Identity = 99/157 (63.06%), Postives = 126/157 (80.25%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 +++VG+K+T T TGVEMF+K LDE AGDNVG+LLRG ++ +++RG VLAKPG+ITPH KF A +YVL KEEGGRH+PF GYRPQFY RTTDVTG++ S+ E +MVMPGD +K+ VELI PVA ++G+RFA+REGG+TVGAGV+ IIE Sbjct: 245 IEIVGIKDTTKTTCTGVEMFRKLLDEGQAGDNVGILLRGTKREEVERGQVLAKPGSITPHKKFEAEIYVLSKEEGGRHTPFLQGYRPQFYFRTTDVTGQLLSL----PEGIEMVMPGDNVKVTVELIAPVAMDEGLRFAVREGGRTVGAGVVTKIIE 397
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_COXBN (Elongation factor Tu OS=Coxiella burnetii (strain Dugway 5J108-111) GN=tuf1 PE=3 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 2.633e-53 Identity = 99/157 (63.06%), Postives = 126/157 (80.25%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 +++VG+K+T T TGVEMF+K LDE AGDNVG+LLRG ++ +++RG VLAKPG+ITPH KF A +YVL KEEGGRH+PF GYRPQFY RTTDVTG++ S+ E +MVMPGD +K+ VELI PVA ++G+RFA+REGG+TVGAGV+ IIE Sbjct: 245 IEIVGIKDTTKTTCTGVEMFRKLLDEGQAGDNVGILLRGTKREEVERGQVLAKPGSITPHKKFEAEIYVLSKEEGGRHTPFLQGYRPQFYFRTTDVTGQLLSL----PEGIEMVMPGDNVKVTVELIAPVAMDEGLRFAVREGGRTVGAGVVTKIIE 397
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_ACTPJ (Elongation factor Tu OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=tuf1 PE=3 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 2.633e-53 Identity = 103/157 (65.61%), Postives = 124/157 (78.98%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 V++VG+KET TVTGVEMF+K LDE AG+NVG LLRG ++ +I+RG VLAKPGTITPHT F + VYVL KEEGGRH+PFF GYRPQFY RTTDVTG + + E +MVMPGD IKM V LI P+A ++G+RFAIREGG+TVGAGV+ II+ Sbjct: 243 VEIVGIKETTKTTVTGVEMFRKLLDEGRAGENVGALLRGTKREEIERGQVLAKPGTITPHTDFESEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIKMTVSLIHPIAMDEGLRFAIREGGRTVGAGVVAKIIK 394
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_ACTP2 (Elongation factor Tu OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=tuf1 PE=3 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 2.633e-53 Identity = 103/157 (65.61%), Postives = 124/157 (78.98%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 V++VG+KET TVTGVEMF+K LDE AG+NVG LLRG ++ +I+RG VLAKPGTITPHT F + VYVL KEEGGRH+PFF GYRPQFY RTTDVTG + + E +MVMPGD IKM V LI P+A ++G+RFAIREGG+TVGAGV+ II+ Sbjct: 243 VEIVGIKETTKTTVTGVEMFRKLLDEGRAGENVGALLRGTKREEIERGQVLAKPGTITPHTDFESEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIKMTVSLIHPIAMDEGLRFAIREGGRTVGAGVVAKIIK 394
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_PELPD (Elongation factor Tu OS=Pelobacter propionicus (strain DSM 2379) GN=tuf1 PE=3 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 3.438e-53 Identity = 101/157 (64.33%), Postives = 124/157 (78.98%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 V++VG+K T TVTGVEMF+K LDE AGDN+G LLRG+++ +I+RG VLAKPG+ITPHTKF A Y+L KEEGGRH+PFF GYRPQFY RTTDVTG V D ++MVMPGD + + V LI P+A ++G+RFAIREGG+TVGAGV+ SIIE Sbjct: 245 VEIVGIKATAKTTVTGVEMFRKLLDEGRAGDNIGALLRGIKREEIERGQVLAKPGSITPHTKFKAEAYILNKEEGGRHTPFFNGYRPQFYFRTTDVTGIV-----DLPAGTEMVMPGDNVAVTVNLITPIAMDEGLRFAIREGGRTVGAGVVSSIIE 396 The following BLAST results are available for this feature:
BLAST of DC900270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900270 ID=DC900270; Name=DC900270; organism=Citrus sinensis; type=EST; length=885bpback to top |