DC900270
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_AERHH (Elongation factor Tu OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=tuf1 PE=3 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 4.491e-53 Identity = 101/156 (64.74%), Postives = 123/156 (78.85%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 473 V++VG+K+T T TGVEMF+K LDE AG+N+G LLRGV++ D++RG VLAKPGTI PHTKF + VYVL KEEGGRH+PFF GYRPQFY RTTDVTG + + E +MVMPGD IKMVV LI P+A + G+RFAIREGG+TVGAGV+ +I Sbjct: 243 VEIVGIKDTTKTTCTGVEMFRKLLDEGRAGENIGALLRGVKREDVERGQVLAKPGTIKPHTKFESEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIKMVVTLIAPIAMDDGLRFAIREGGRTVGAGVVAKVI 393
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU2_ROSCS (Elongation factor Tu 2 OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=tuf2 PE=3 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 4.491e-53 Identity = 102/160 (63.75%), Postives = 129/160 (80.62%), Query Frame = 3 Query: 3 TVDLVGLKET--RNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 TV++VG+ + VTGVEMFQKTLDE +AGDNVG+LLRG+++ +++RG VLA PG+I PH KF A VYVLKKEEGGRH+PFF GYRPQFY+RTTDVTG +S +MVMPGD I+M+VELI+PVA E+G+RFAIREGG+TVGAGV+ +I++ Sbjct: 247 TVEIVGMSHEAPKKTVVTGVEMFQKTLDEGIAGDNVGVLLRGIERTEVERGQVLAAPGSIKPHAKFKANVYVLKKEEGGRHTPFFPGYRPQFYIRTTDVTGAIS-----LPAGVEMVMPGDNIEMLVELIVPVAIEEGLRFAIREGGRTVGAGVVSAIVD 401
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU1_ROSCS (Elongation factor Tu 1 OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=tuf1 PE=3 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 4.491e-53 Identity = 102/160 (63.75%), Postives = 129/160 (80.62%), Query Frame = 3 Query: 3 TVDLVGLKET--RNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 TV++VG+ + VTGVEMFQKTLDE +AGDNVG+LLRG+++ +++RG VLA PG+I PH KF A VYVLKKEEGGRH+PFF GYRPQFY+RTTDVTG +S +MVMPGD I+M+VELI+PVA E+G+RFAIREGG+TVGAGV+ +I++ Sbjct: 247 TVEIVGMSHEAPKKTVVTGVEMFQKTLDEGIAGDNVGVLLRGIERTEVERGQVLAAPGSIKPHAKFKANVYVLKKEEGGRHTPFFPGYRPQFYIRTTDVTGAIS-----LPAGVEMVMPGDNIEMLVELIVPVAIEEGLRFAIREGGRTVGAGVVSAIVD 401
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_NITOC (Elongation factor Tu OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=tuf1 PE=3 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 5.865e-53 Identity = 98/157 (62.42%), Postives = 124/157 (78.98%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 +++VG++ET+ TGVEMF+K LDE AGDNVG+LLRG ++ D++RG VLAKP +ITPHTKF A VYVL K+EGGRH+PFF GYRPQFY RTTDVTG + D + +MVMPGD I+M V LI P+A E+G+RFA+REGG+TVGAGV+ +IE Sbjct: 245 IEIVGMRETQKTICTGVEMFRKLLDEGRAGDNVGVLLRGTKREDVERGQVLAKPKSITPHTKFYAEVYVLSKDEGGRHTPFFTGYRPQFYFRTTDVTGAI-----DLPDGVEMVMPGDNIQMTVSLIAPIAMEEGLRFAVREGGRTVGAGVVSKVIE 396
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_CHRSD (Elongation factor Tu OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=tuf PE=3 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 5.865e-53 Identity = 101/157 (64.33%), Postives = 122/157 (77.71%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 V++VGLK+T TVTGVEMF+K LDE AG+N+G LLRG ++ D++RG VLAKPGTITPHT F A VYVL KEEGGRH+PFF GYRPQFY RTTDVTG + E +MVMPGD +KM V LI P+A E G+RFA+REGG+TVGAGV+ I++ Sbjct: 246 VEIVGLKDTAKTTVTGVEMFRKLLDEGRAGENIGALLRGTKRDDVERGQVLAKPGTITPHTVFEAEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGTC-----ELPEGVEMVMPGDNVKMTVTLIAPIAMEDGLRFAVREGGRTVGAGVVAKIVQ 397
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_CHLPB (Elongation factor Tu OS=Chlorobium phaeobacteroides (strain BS1) GN=tuf PE=3 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 5.865e-53 Identity = 102/157 (64.97%), Postives = 123/157 (78.34%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 V+LVG+K T+ VTG+EMFQK LD+ AGDN GLL RGV K +I+RGMV+AKPGTITPHTKF A VY+LKKEEGGRH+PFF YRPQFY RTTDVTG V+ E +MVMPGD + + VELI+P+A ++ +RFAIREGG+TVGAG + IIE Sbjct: 242 VELVGIKPTKKTVVTGIEMFQKILDQGQAGDNAGLLFRGVGKDEIERGMVVAKPGTITPHTKFKAEVYILKKEEGGRHTPFFNNYRPQFYFRTTDVTGAVT-----LPEGVEMVMPGDNLSIEVELIVPIAMDENLRFAIREGGRTVGAGTVTQIIE 393
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_NEIGO (Elongation factor Tu OS=Neisseria gonorrhoeae GN=tuf PE=3 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 7.660e-53 Identity = 100/156 (64.10%), Postives = 125/156 (80.13%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 473 +++VGLKET+ T TGVEMF+K LDE AGDNVG+LLRG ++ D++RG VLAK GTITPHTKF A VYVL KEEGG H+PFFA YRPQFY RTTDVTG ++ ++ +MVMPG+ + + VELI P+A E+G+RFAIREGG+TVGAGV+ S+I Sbjct: 243 IEIVGLKETQKTTCTGVEMFRKLLDEGQAGDNVGVLLRGTKREDVERGQVLAKRGTITPHTKFKAEVYVLSKEEGGPHTPFFANYRPQFYFRTTDVTGTIT-----LEKGVEMVMPGENVTITVELIAPIAMEEGLRFAIREGGRTVGAGVVSSVI 393
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_DEISP (Elongation factor Tu OS=Deinonema sp. GN=tuf PE=3 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 7.660e-53 Identity = 101/157 (64.33%), Postives = 124/157 (78.98%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 V+++GL++T+ TVTG+EM +K LD MAGDNVG+LLRGV + D++RG VLAKPG+I PHTKF A VYVL K+EGGRHS FF GYRPQFY RTTDVTG V + E +MVMPGD I VVELI P+A E+G+RFAIREGG+TVGAGV+ ++E Sbjct: 254 VEIIGLRDTKKTTVTGIEMHRKLLDSGMAGDNVGVLLRGVARDDVERGQVLAKPGSIKPHTKFEASVYVLSKDEGGRHSAFFGGYRPQFYFRTTDVTGVV-----ELPEGVEMVMPGDNITFVVELIKPIAMEEGLRFAIREGGRTVGAGVVAKVLE 405
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_CLONN (Elongation factor Tu OS=Clostridium novyi (strain NT) GN=tuf1 PE=3 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 7.660e-53 Identity = 105/158 (66.46%), Postives = 125/158 (79.11%), Query Frame = 3 Query: 6 VDLVGLKET-RNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 V +VG+KE T+TGVEMF+K LDEAMAGDN+G LLRGVQ+ +I+RG VLAKPG++TPH KF+ VYVLKKEEGGRH+PFF GYRPQFY RTTDVTG ++ E +MVMPGD I M VELI PVA E +RFAIREGG+TVG+GV+ SI+E Sbjct: 241 VQIVGMKEEIGKTTITGVEMFRKMLDEAMAGDNIGALLRGVQRDEIERGQVLAKPGSVTPHKKFVGQVYVLKKEEGGRHTPFFNGYRPQFYFRTTDVTGSIA-----LPEGVEMVMPGDHIDMNVELITPVAMENNLRFAIREGGRTVGSGVVTSIVE 393
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_CHLT3 (Elongation factor Tu OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) GN=tuf PE=3 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 7.660e-53 Identity = 100/157 (63.69%), Postives = 125/157 (79.62%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 V+LVG++ T+ VTG+EMF+K LD+ AGDN GLLLRGV K +++RGMV+AKPG+ITPHTKF A VY+LKKEEGGRH+PFF GYRPQFY RTTDVTG V + + +MVMPGD + + ELI P+A ++G+RFAIREGG+TVGAG + SIIE Sbjct: 242 VELVGIRPTKKSVVTGIEMFRKLLDQGEAGDNAGLLLRGVNKDELERGMVIAKPGSITPHTKFKAEVYILKKEEGGRHTPFFNGYRPQFYFRTTDVTGSV-----NLPDGVEMVMPGDNLSIEAELIAPIAMDEGLRFAIREGGRTVGAGTVTSIIE 393 The following BLAST results are available for this feature:
BLAST of DC900270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900270 ID=DC900270; Name=DC900270; organism=Citrus sinensis; type=EST; length=885bpback to top |