DC900270
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_DESVV (Elongation factor Tu OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=tuf PE=3 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 1.597e-50 Identity = 97/157 (61.78%), Postives = 121/157 (77.07%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 V++VG+K+T T TGVEMF+K LD+ AGDN+G LLRGV++ D++RG VLA P +ITPH KF A VYVL KEEGGRH+PFF+GYRPQFY RTTD+TG ++ +E +MVMPGD VELI P+A E G+RFAIREGG+TVGAGV+ I+E Sbjct: 246 VEIVGIKDTTKSTCTGVEMFRKLLDQGQAGDNIGALLRGVKRDDVERGQVLAAPKSITPHRKFKAEVYVLSKEEGGRHTPFFSGYRPQFYFRTTDITGVIT-----LEEGVEMVMPGDNATFNVELIAPIAMELGLRFAIREGGRTVGAGVVSEIVE 397
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_DESVH (Elongation factor Tu OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=tuf PE=3 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 1.597e-50 Identity = 97/157 (61.78%), Postives = 121/157 (77.07%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 V++VG+K+T T TGVEMF+K LD+ AGDN+G LLRGV++ D++RG VLA P +ITPH KF A VYVL KEEGGRH+PFF+GYRPQFY RTTD+TG ++ +E +MVMPGD VELI P+A E G+RFAIREGG+TVGAGV+ I+E Sbjct: 246 VEIVGIKDTTKSTCTGVEMFRKLLDQGQAGDNIGALLRGVKRDDVERGQVLAAPKSITPHRKFKAEVYVLSKEEGGRHTPFFSGYRPQFYFRTTDITGVIT-----LEEGVEMVMPGDNATFNVELIAPIAMELGLRFAIREGGRTVGAGVVSEIVE 397
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_BACP2 (Elongation factor Tu OS=Bacillus pumilus (strain SAFR-032) GN=tuf PE=3 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 1.597e-50 Identity = 103/158 (65.19%), Postives = 123/158 (77.85%), Query Frame = 3 Query: 6 VDLVGLKETRN-FTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 V+++GL+E TVTGVEMF+K LD A AGDN+G LLRGV + DIQRG VLAKPGTITPH++F A VYVL KEEGGRH+PFFA YRPQFY RTTDVTG V E ++MVMPGD +M VELI +A E+G RF+IREGG+TVG+GV+ SII+ Sbjct: 244 VEIIGLQEENGKTTVTGVEMFRKLLDYAEAGDNIGALLRGVSREDIQRGQVLAKPGTITPHSRFKAEVYVLSKEEGGRHTPFFANYRPQFYFRTTDVTGIV-----HLPEGTEMVMPGDNTEMEVELISTIAIEEGTRFSIREGGRTVGSGVVSSIIK 396
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU1_DESPS (Elongation factor Tu 1 OS=Desulfotalea psychrophila GN=tuf1 PE=3 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 1.597e-50 Identity = 100/156 (64.10%), Postives = 120/156 (76.92%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 473 V +VG+++T T TGVEMF+K LDE AGDN+G LLRGV++ DI+RG VLAKPGTITPHTKF A Y+L K+EGGRH+PFF GYRPQFY RTTDVTG V+ E +MVMPGD + + ELI P+A + G+RFAIREGG+TVGAGVI II Sbjct: 245 VAIVGVRDTVKTTCTGVEMFRKLLDEGRAGDNIGALLRGVKREDIERGQVLAKPGTITPHTKFKAECYILGKDEGGRHTPFFNGYRPQFYFRTTDVTGIVT-----LPEGIEMVMPGDNVAVEAELITPIAMDAGLRFAIREGGRTVGAGVISEII 395
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_TREDE (Elongation factor Tu OS=Treponema denticola GN=tuf PE=3 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 2.086e-50 Identity = 95/157 (60.51%), Postives = 122/157 (77.71%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 V++VG+K T+ VTG+EMF K LDE AGDNVGLLLRG++K +++RG VLAKPG+I PHTKF A +YVL KEEGGRHSPFF+GYRPQFY RTTD+TG V + E + MV PGD K++ ELI P+A +QG++ AIREGG+T+ +G + +IIE Sbjct: 244 VEIVGIKPTKKTVVTGIEMFNKLLDEGEAGDNVGLLLRGIEKKEVERGQVLAKPGSIHPHTKFEAQIYVLSKEEGGRHSPFFSGYRPQFYFRTTDITGTV-----NLPEGTDMVKPGDNTKIIGELIHPIAMDQGLKLAIREGGRTIASGQVTNIIE 395
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_THICU (Elongation factor Tu OS=Thiobacillus cuprinus GN=tuf PE=3 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 2.086e-50 Identity = 94/157 (59.87%), Postives = 121/157 (77.07%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 +++VGLK T T TGVEMF+K LD+ AGDNVG+LLRG ++ +++RG VL KPG+I PHT F A VYVL K+EGGRH+PFF YRPQFY RTTDVTG + + ++ +MVMPGD + + V+LI P+A E+G+RFAIREGG+TVGAGV+ IIE Sbjct: 245 IEIVGLKPTLKTTCTGVEMFRKLLDQGQAGDNVGILLRGTKREEVERGQVLCKPGSIKPHTHFTAEVYVLSKDEGGRHTPFFNNYRPQFYFRTTDVTGAI-----ELPKDKEMVMPGDNVSITVKLIAPIAMEEGLRFAIREGGRTVGAGVVAKIIE 396
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_SPHAL (Elongation factor Tu OS=Sphingopyxis alaskensis GN=tuf PE=3 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 2.086e-50 Identity = 93/155 (60.00%), Postives = 124/155 (80.00%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSI 470 V++VG+K+T+ VTGVEMF+K LD+ AGDN+G L+RGV + +++RG VLAKPG+ITPHT+F + VYVL K+EGGRH+PFFA YRPQFY RTTDVTG V E ++MVMPGD +++ V+LI P+A + G+RFAIREGG+TVGAGV+ ++ Sbjct: 246 VEIVGIKDTKKTVVTGVEMFRKLLDQGQAGDNIGALIRGVGREEVERGQVLAKPGSITPHTEFTSEVYVLSKDEGGRHTPFFANYRPQFYFRTTDVTGEVI-----LPEGTEMVMPGDNVQLSVKLIAPIAMDPGLRFAIREGGRTVGAGVVATV 395
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_RUBXD (Elongation factor Tu OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=tuf1 PE=3 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 2.086e-50 Identity = 95/157 (60.51%), Postives = 123/157 (78.34%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 V++VG++ TR VTG+EMF K++ EA AGDN+G+LLRG+++ +I+RG VLA PG+ITPHT+F A VYVL KEEGGRH+PFF+ YRPQFY RTTDVTG + +E +MVMPGD M V+LI P+A ++G+ FAIREGG+TVGAGV+ IIE Sbjct: 249 VEIVGIRPTRKTVVTGIEMFNKSMQEAQAGDNIGVLLRGIKRDEIERGQVLAAPGSITPHTRFKAEVYVLSKEEGGRHTPFFSHYRPQFYFRTTDVTGEIF-----LEEGVEMVMPGDNTVMEVQLISPIAMDEGLNFAIREGGRTVGAGVVTQIIE 400
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_RHOP2 (Elongation factor Tu OS=Rhodopseudomonas palustris (strain HaA2) GN=tuf1 PE=3 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 2.086e-50 Identity = 95/157 (60.51%), Postives = 121/157 (77.07%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 +++VG+++T+ T TGVEMF+K LD+ AGDN+G LLRG ++ D++RG VL KPG++ PHTKF A Y+L KEEGGRH+PFF YRPQFY RTTDVTG V E ++MVMPGD I M V LI+P+A E+ +RFAIREGG+TVGAGV+ SIIE Sbjct: 245 IEIVGIRDTQKTTCTGVEMFRKLLDQGQAGDNIGCLLRGTKREDVERGQVLCKPGSVKPHTKFKAEAYILTKEEGGRHTPFFTNYRPQFYFRTTDVTGVV-----HLPEGTEMVMPGDNIAMEVHLIVPIAMEEKLRFAIREGGRTVGAGVVASIIE 396
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_ERYLH (Elongation factor Tu OS=Erythrobacter litoralis (strain HTCC2594) GN=tuf PE=3 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 2.086e-50 Identity = 95/155 (61.29%), Postives = 122/155 (78.71%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSI 470 V++VG+K+T TVTGVEMF+K LD AGDN+G L+RGV + D++RG VLAKPG++TPHT+F A VYVL K+EGGRH+PFFA YRPQFY RTTDVTG V E ++MVMPGD + + V+LI P+A ++G+RFAIREGG+TVG+GV+ I Sbjct: 245 VEIVGIKDTTKTTVTGVEMFRKLLDRGEAGDNIGALIRGVGREDVERGQVLAKPGSVTPHTEFSAEVYVLSKDEGGRHTPFFANYRPQFYFRTTDVTGEVI-----LPEGTEMVMPGDNVTINVKLIAPIAMDEGLRFAIREGGRTVGSGVVSKI 394 The following BLAST results are available for this feature:
BLAST of DC900270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900270 ID=DC900270; Name=DC900270; organism=Citrus sinensis; type=EST; length=885bpback to top |