DC900270
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_BACST (Elongation factor Tu OS=Bacillus stearothermophilus GN=tuf PE=3 SV=2) HSP 1 Score: 199.519 bits (506), Expect = 2.086e-50 Identity = 99/158 (62.66%), Postives = 124/158 (78.48%), Query Frame = 3 Query: 6 VDLVGLK-ETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 V+++GL E + TVTGVEMF+K LD+A AGDN+G LLRGV + +++RG VLAKPG+ITPHTKF A VYVL KEEGGRH+PFF+ YRPQFY RTTDVTG ++ E +MVMPGD ++M VELI P+A E+G +F+IREGG+TVGAG + IIE Sbjct: 243 VEIIGLSDEPKATTVTGVEMFRKLLDQAEAGDNIGALLRGVSRDEVERGQVLAKPGSITPHTKFKAQVYVLTKEEGGRHTPFFSNYRPQFYFRTTDVTGIIT-----LPEGVEMVMPGDNVEMTVELIAPIAIEEGTKFSIREGGRTVGAGSVSEIIE 395
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_BACLD (Elongation factor Tu OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=tuf PE=3 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 2.086e-50 Identity = 102/158 (64.56%), Postives = 122/158 (77.22%), Query Frame = 3 Query: 6 VDLVGLKE-TRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 V+++GL+E + TVTGVEMF+K LD A AGDN+G LLRGV + +IQRG VLA+PGTITPH KF A VYVL KEEGGRH+PFF+ YRPQFY RTTDVTG + E +MVMPGD I+M VELI +A E G RF+IREGG+TVG+GV+ SIIE Sbjct: 244 VEIIGLQEENKKTTVTGVEMFRKLLDYAEAGDNIGALLRGVSREEIQRGQVLAQPGTITPHKKFKAEVYVLSKEEGGRHTPFFSNYRPQFYFRTTDVTGII-----QLPEGVEMVMPGDNIEMTVELISTIAIEDGTRFSIREGGRTVGSGVVSSIIE 396
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_BACHD (Elongation factor Tu OS=Bacillus halodurans GN=tuf PE=3 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 2.086e-50 Identity = 99/156 (63.46%), Postives = 122/156 (78.21%), Query Frame = 3 Query: 6 VDLVGLKE-TRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSI 470 V+++GL+E + TVTGVEMF+K LD A AGDN+G LLRGV + ++QRG VLAKPGTITPHT F A VYVL KEEGGRH+PFF+ YRPQFY RTTDVTG + + +MVMPGD ++M VELI P+A E+G +F+IREGG+TVGAGV+ SI Sbjct: 244 VEIIGLEEEAKKTTVTGVEMFRKLLDYAEAGDNIGALLRGVSREEVQRGQVLAKPGTITPHTNFKAEVYVLSKEEGGRHTPFFSNYRPQFYFRTTDVTGII-----QLPDGVEMVMPGDNVEMTVELIAPIAIEEGTKFSIREGGRTVGAGVVASI 394
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_BACA2 (Elongation factor Tu OS=Bacillus amyloliquefaciens (strain FZB42) GN=tuf PE=3 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 2.086e-50 Identity = 101/158 (63.92%), Postives = 124/158 (78.48%), Query Frame = 3 Query: 6 VDLVGLKETRN-FTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 V+++GL+E + TVTGVEMF+K LD A AGDN+G LLRGV + DIQRG VLAKPGTITPH+KF A VYVL KEEGGRH+PFF+ YRPQFY RTTDVTG + + E +MVMPGD +M+VELI +A E+G RF+IREGG+TVG+GV+ +I E Sbjct: 244 VEIIGLQEENSKTTVTGVEMFRKLLDYAEAGDNIGALLRGVAREDIQRGQVLAKPGTITPHSKFKAEVYVLSKEEGGRHTPFFSNYRPQFYFRTTDVTGII-----NLPEGVEMVMPGDNTEMIVELISTIAIEEGTRFSIREGGRTVGSGVVSTITE 396
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU2_WOLTR (Elongation factor Tu 2 OS=Wolbachia sp. subsp. Brugia malayi (strain TRS) GN=tuf2 PE=3 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 2.086e-50 Identity = 93/157 (59.24%), Postives = 125/157 (79.62%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 ++++GLK T+ T TGVEMF+K L++ AG NVG+LLRG ++ +++RG VLAKPGTITPH KF A VY+LKKEEGGRH+PFFA Y+PQFY+RTTDVTG + + E +MVMPGD + + VEL +P+A ++G+RFAIREGG+TVG+GV+ I+E Sbjct: 239 IEIIGLKATQKTTCTGVEMFKKLLEKGSAGLNVGILLRGTKREEVERGQVLAKPGTITPHRKFKAEVYILKKEEGGRHTPFFANYQPQFYLRTTDVTGSIKLL-----EGKEMVMPGDNVSIEVELQVPIAMDKGLRFAIREGGRTVGSGVVSEILE 390
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU2_RHOPS (Elongation factor Tu 2 OS=Rhodopseudomonas palustris (strain BisB5) GN=tuf2 PE=3 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 2.086e-50 Identity = 95/157 (60.51%), Postives = 121/157 (77.07%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 +++VG+++T+ T TGVEMF+K LD+ AGDN+G LLRG ++ D++RG VL KPG++ PHTKF A Y+L KEEGGRH+PFF YRPQFY RTTDVTG V E ++MVMPGD I M V LI+P+A E+ +RFAIREGG+TVGAGV+ SIIE Sbjct: 245 IEIVGIRDTQKTTCTGVEMFRKLLDQGQAGDNIGCLLRGTKREDVERGQVLCKPGSVKPHTKFKAEAYILTKEEGGRHTPFFTNYRPQFYFRTTDVTGVV-----HLPEGTEMVMPGDNIAMEVHLIVPIAMEEKLRFAIREGGRTVGAGVVASIIE 396
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU2_NITEC (Elongation factor Tu 2 OS=Nitrosomonas eutropha (strain C91) GN=tuf2 PE=3 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 2.086e-50 Identity = 96/157 (61.15%), Postives = 120/157 (76.43%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 +++VGL+ T T TGVEMF+K LD+ AGDNVG+LLRG ++ +++RG VLAKPG+I PHTKF A +YVL KEEGGRH+PFFAGYRPQFY RTTDVTG + + +MVMPGD I + V LI P+A G+RFAIREGG+TVGAGV+ +IE Sbjct: 245 IEIVGLRPTIKTTCTGVEMFRKLLDQGQAGDNVGILLRGTKREEVERGQVLAKPGSILPHTKFSAEIYVLSKEEGGRHTPFFAGYRPQFYFRTTDVTGSI-----ELPAGVEMVMPGDNISVNVNLIAPIAMSDGLRFAIREGGRTVGAGVVAKVIE 396
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU2_CAUSK (Elongation factor Tu 2 OS=Caulobacter sp. (strain K31) GN=tuf2 PE=3 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 2.086e-50 Identity = 94/157 (59.87%), Postives = 121/157 (77.07%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 V++VG++ + T TGVEMF+K LD+ AGDNVG+LLRG ++ D++RG VL KPG+ITPHTKF+A Y+L KEEGGRH+PFF YRPQFY RTTDVTG + E +M+MPGD ++ VELI P+A +QG+RFAIREGG+TVGAGV+ I+E Sbjct: 245 VEIVGIRAVQKTTCTGVEMFRKLLDQGQAGDNVGVLLRGTKREDVERGQVLCKPGSITPHTKFVAEAYILTKEEGGRHTPFFTNYRPQFYFRTTDVTGIIK-----LREGVEMIMPGDNAELDVELITPIAMDQGLRFAIREGGRTVGAGVVAKIVE 396
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU1_YERPN (Elongation factor Tu 1 OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=tuf1 PE=3 SV=2) HSP 1 Score: 199.519 bits (506), Expect = 2.086e-50 Identity = 96/157 (61.15%), Postives = 121/157 (77.07%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 V++VG+ +T T TGVEMF+K LDE AG+NVG+LLRG ++ D+QRG VLAKPG+I PHTKF + VY+L K+EGGRH+PFF GYRPQFY RT DVTG + + E +MVMPGD + MVV LI P+A + G+RFAIREGG+TVGAGV+ +IE Sbjct: 243 VEIVGIIDTIKTTCTGVEMFRKLLDEGRAGENVGVLLRGTKRDDVQRGQVLAKPGSIKPHTKFESEVYILSKDEGGRHTPFFKGYRPQFYFRTIDVTGTI-----ELPEGVEMVMPGDNVNMVVNLIAPIAMDDGLRFAIREGGRTVGAGVVAKVIE 394
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU1_WOLTR (Elongation factor Tu 1 OS=Wolbachia sp. subsp. Brugia malayi (strain TRS) GN=tuf1 PE=3 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 2.086e-50 Identity = 93/157 (59.24%), Postives = 125/157 (79.62%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 ++++GLK T+ T TGVEMF+K L++ AG NVG+LLRG ++ +++RG VLAKPGTITPH KF A VY+LKKEEGGRH+PFFA Y+PQFY+RTTDVTG + + E +MVMPGD + + VEL +P+A ++G+RFAIREGG+TVG+GV+ I+E Sbjct: 246 IEIIGLKATQKTTCTGVEMFKKLLEKGSAGLNVGILLRGTKREEVERGQVLAKPGTITPHRKFKAEVYILKKEEGGRHTPFFANYQPQFYLRTTDVTGSIKLL-----EGKEMVMPGDNVSIEVELQVPIAMDKGLRFAIREGGRTVGSGVVSEILE 397 The following BLAST results are available for this feature:
BLAST of DC900270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900270 ID=DC900270; Name=DC900270; organism=Citrus sinensis; type=EST; length=885bpback to top |