DC900270
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_PSEP1 (Elongation factor Tu OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=tuf PE=3 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 3.558e-50 Identity = 97/157 (61.78%), Postives = 119/157 (75.80%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 +++VGL++T T TGVEMF+K LDE AG+N G+LLRG ++ D++RG VL KPG++ PHTKF A VYVL KEEGGRH+PFF GYRPQFY RTTDVTG + E +MVMPGD I+M V LI +A E G+RFAIREGG+TVGAGV+ IIE Sbjct: 246 LEIVGLRDTTTTTCTGVEMFRKLLDEGRAGENCGVLLRGTKRDDVERGQVLVKPGSVKPHTKFTAEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGNC-----ELPEGVEMVMPGDNIQMTVTLIKTIAMEDGLRFAIREGGRTVGAGVVAKIIE 397
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_PSEE4 (Elongation factor Tu OS=Pseudomonas entomophila (strain L48) GN=tuf1 PE=3 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 3.558e-50 Identity = 97/157 (61.78%), Postives = 119/157 (75.80%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 +++VGL++T T TGVEMF+K LDE AG+N G+LLRG ++ D++RG VL KPG++ PHTKF A VYVL KEEGGRH+PFF GYRPQFY RTTDVTG + E +MVMPGD I+M V LI +A E G+RFAIREGG+TVGAGV+ IIE Sbjct: 246 LEIVGLRDTTTTTCTGVEMFRKLLDEGRAGENCGVLLRGTKRDDVERGQVLVKPGSVKPHTKFTAEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGNC-----ELPEGVEMVMPGDNIQMTVTLIKTIAMEDGLRFAIREGGRTVGAGVVAKIIE 397
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_LYSSC (Elongation factor Tu OS=Lysinibacillus sphaericus (strain C3-41) GN=tuf PE=3 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 3.558e-50 Identity = 100/156 (64.10%), Postives = 124/156 (79.49%), Query Frame = 3 Query: 6 VDLVGL-KETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSI 470 V+++G+ +E ++ TVTGVEMF+K LD A AGDN+G LLRGV + +IQRG VLAKPG+ITPHT F A VYVL KEEGGRH+PFF+ YRPQFY RTTDVTG + + E +MVMPGD I+M VELI P+A E+G +F+IREGG+TVGAGV+ SI Sbjct: 243 VEIIGIAEEAKSTTVTGVEMFRKLLDYAEAGDNIGALLRGVAREEIQRGQVLAKPGSITPHTNFKAEVYVLSKEEGGRHTPFFSNYRPQFYFRTTDVTG-----ICNLPEGVEMVMPGDNIEMTVELIAPIALEEGTKFSIREGGRTVGAGVVASI 393
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_LEPBP (Elongation factor Tu OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=tuf PE=3 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 3.558e-50 Identity = 94/157 (59.87%), Postives = 123/157 (78.34%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 +++VG+++T VTG+EMF+K LD+A AGDN+G LLRG +K DI+RG VLAKPGTITPH KF A VYVL K+EGGRH+PFF YRPQFY RTTD+TG V ++ + MVMPGD + M +ELI P+A +QG++FAIREGG+T+G+GV+ I+E Sbjct: 250 IEIVGIRDTTKSVVTGIEMFRKLLDQAEAGDNIGALLRGTKKEDIERGQVLAKPGTITPHRKFKAEVYVLTKDEGGRHTPFFNNYRPQFYFRTTDITG-VCNLPGGME----MVMPGDNVTMSIELIHPIAMDQGLKFAIREGGRTIGSGVVAEIVE 401
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_LEPBA (Elongation factor Tu OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=tuf PE=3 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 3.558e-50 Identity = 94/157 (59.87%), Postives = 123/157 (78.34%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 +++VG+++T VTG+EMF+K LD+A AGDN+G LLRG +K DI+RG VLAKPGTITPH KF A VYVL K+EGGRH+PFF YRPQFY RTTD+TG V ++ + MVMPGD + M +ELI P+A +QG++FAIREGG+T+G+GV+ I+E Sbjct: 250 IEIVGIRDTTKSVVTGIEMFRKLLDQAEAGDNIGALLRGTKKEDIERGQVLAKPGTITPHRKFKAEVYVLTKDEGGRHTPFFNNYRPQFYFRTTDITG-VCNLPGGME----MVMPGDNVTMSIELIHPIAMDQGLKFAIREGGRTIGSGVVAEIVE 401
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_AZOSE (Elongation factor Tu OS=Azoarcus sp. (strain EbN1) GN=tuf1 PE=3 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 3.558e-50 Identity = 95/157 (60.51%), Postives = 120/157 (76.43%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 V++VG+K T T TGVEMF+K LD+ AGDNVG+LLRG ++ D++RG VL KPG+I PHT F VYVL KEEGGRH+PFF YRPQFY RTTDVTG + + E ++MVMPGD + + V+L+ P+A E+G+RFAIREGG+TVGAGV+ IIE Sbjct: 245 VEIVGIKATVKTTCTGVEMFRKLLDQGQAGDNVGVLLRGTKREDVERGQVLCKPGSIKPHTHFTGEVYVLSKEEGGRHTPFFNNYRPQFYFRTTDVTGSI-----ELPEGTEMVMPGDNVSITVKLMAPIAMEEGLRFAIREGGRTVGAGVVAKIIE 396
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_AZOC5 (Elongation factor Tu OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=tuf1 PE=3 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 3.558e-50 Identity = 95/157 (60.51%), Postives = 123/157 (78.34%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 V++VG++ T TVTG+EMF+K LD+ AGDNVG+LLRG ++ D++RG V+ KPG++ PHTKF A Y+L KEEGGRH+PFF YRPQFY RTTDVTG V+ E ++MVMPGD I + V+LI+P+A E+ +RFAIREGG+TVGAGV+ SIIE Sbjct: 246 VEIVGIRPTVKTTVTGIEMFRKLLDQGQAGDNVGVLLRGTKREDVERGQVVCKPGSVKPHTKFKAEAYILTKEEGGRHTPFFTNYRPQFYFRTTDVTGVVT-----LPEGTEMVMPGDNISVDVQLIVPIAMEEKLRFAIREGGRTVGAGVVASIIE 397
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU2_PSEPK (Elongation factor Tu-B OS=Pseudomonas putida (strain KT2440) GN=tufB PE=3 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 3.558e-50 Identity = 97/157 (61.78%), Postives = 119/157 (75.80%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 +++VGL++T T TGVEMF+K LDE AG+N G+LLRG ++ D++RG VL KPG++ PHTKF A VYVL KEEGGRH+PFF GYRPQFY RTTDVTG + E +MVMPGD I+M V LI +A E G+RFAIREGG+TVGAGV+ IIE Sbjct: 246 LEIVGLRDTTTTTCTGVEMFRKLLDEGRAGENCGVLLRGTKRDDVERGQVLVKPGSVKPHTKFTAEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGNC-----ELPEGVEMVMPGDNIQMTVTLIKTIAMEDGLRFAIREGGRTVGAGVVAKIIE 397
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU1_SERP5 (Elongation factor Tu 1 OS=Serratia proteamaculans (strain 568) GN=tuf1 PE=3 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 3.558e-50 Identity = 95/156 (60.90%), Postives = 122/156 (78.21%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 473 V++VG+K+T T TGVEMF+K LDE AG+NVG+LLRG+++ DI+RG VLAKPG+I PHT+F + VY+L K+EGGRH+PFF GYRPQFY RTTDVTG + + E +MVMPGD + M V LI P+A + G+RFAIREGG+TVGAGV+ +I Sbjct: 243 VEIVGIKDTVKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREDIERGQVLAKPGSIKPHTQFDSEVYILSKDEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNVNMKVTLIHPIAMDDGLRFAIREGGRTVGAGVVAKVI 393
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU1_PSEPK (Elongation factor Tu-A OS=Pseudomonas putida (strain KT2440) GN=tufA PE=3 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 3.558e-50 Identity = 97/157 (61.78%), Postives = 119/157 (75.80%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 +++VGL++T T TGVEMF+K LDE AG+N G+LLRG ++ D++RG VL KPG++ PHTKF A VYVL KEEGGRH+PFF GYRPQFY RTTDVTG + E +MVMPGD I+M V LI +A E G+RFAIREGG+TVGAGV+ IIE Sbjct: 246 LEIVGLRDTTTTTCTGVEMFRKLLDEGRAGENCGVLLRGTKRDDVERGQVLVKPGSVKPHTKFTAEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGNC-----ELPEGVEMVMPGDNIQMTVTLIKTIAMEDGLRFAIREGGRTVGAGVVAKIIE 397 The following BLAST results are available for this feature:
BLAST of DC900270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900270 ID=DC900270; Name=DC900270; organism=Citrus sinensis; type=EST; length=885bpback to top |