DC900270
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_CHLAT (Elongation factor Tu, chloroplastic OS=Chlorokybus atmophyticus GN=tufA PE=3 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 7.153e-59 Identity = 109/158 (68.99%), Postives = 134/158 (84.81%), Query Frame = 3 Query: 6 VDLVGLKETR-NFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 +++VGL+E VTG+EMFQKTL+E++AGDNVG+LLRG+QK DI+RGMVLAKPGTI PH F A VY+L KEEGGRH+PFF GYRPQFY+RTTDVTG++ S D E++MVMPGDRIKMVV+LI P+A E+GMRFAIREGG+TVGAGV+ +I+E Sbjct: 253 IEIVGLREAPVTSIVTGLEMFQKTLEESVAGDNVGILLRGIQKKDIERGMVLAKPGTIKPHKSFEAQVYILNKEEGGRHTPFFQGYRPQFYVRTTDVTGKIESFQADDGSETQMVMPGDRIKMVVQLIQPIAIEKGMRFAIREGGRTVGAGVVFNILE 410
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_PROWI (Elongation factor Tu, plastid OS=Prototheca wickerhamii GN=tufA PE=3 SV=1) HSP 1 Score: 226.868 bits (577), Expect = 1.220e-58 Identity = 110/158 (69.62%), Postives = 132/158 (83.54%), Query Frame = 3 Query: 3 TVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 +V++VGL T+ TVTG+EMFQKTLDE++AGDNVG+LLRG+QK +IQRGMVLAKP +ITPHT F A VYVL KEEGGR +PFF+GYRPQFY+RTTDVTG++ S D E KMV+PGDRIKM ELI P+A E+ MRFAIREGGKTVGAGV+ I++ Sbjct: 252 SVEIVGLGATKITTVTGLEMFQKTLDESIAGDNVGILLRGIQKTEIQRGMVLAKPKSITPHTNFEAQVYVLNKEEGGRDTPFFSGYRPQFYVRTTDVTGKIESFCTDAGEPIKMVLPGDRIKMKAELIQPIAIERNMRFAIREGGKTVGAGVVGKILK 409
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_CYAP7 (Elongation factor Tu OS=Cyanothece sp. (strain PCC 7424) GN=tuf PE=3 SV=1) HSP 1 Score: 226.483 bits (576), Expect = 1.593e-58 Identity = 111/159 (69.81%), Postives = 132/159 (83.02%), Query Frame = 3 Query: 3 TVDLVGLKE-TRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 TV++VG+KE T++ TVTGVEMFQKTL+E +AGDNVGLLLRGVQK +I+RGMV+AKPG+I PHT+F VYVL KEEGGRH+PFF YRPQFY+RTTDVTG + D +MVMPGDRIKM VELI P+A EQGMRFAIREGG+T+GAGV+ II+ Sbjct: 252 TVEIVGIKEKTKSTTVTGVEMFQKTLEEGLAGDNVGLLLRGVQKEEIERGMVIAKPGSIKPHTQFEGEVYVLTKEEGGRHTPFFKNYRPQFYVRTTDVTGTIVDYTADDGSAVEMVMPGDRIKMTVELINPIAIEQGMRFAIREGGRTIGAGVVSKIIQ 410
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_NOSP7 (Elongation factor Tu OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=tuf PE=3 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 4.636e-58 Identity = 105/158 (66.46%), Postives = 135/158 (85.44%), Query Frame = 3 Query: 3 TVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 TV+L+GLK+TR VTG+EMF+K+L+E +AGDN G+LLRG++K DI+RGMV+AKPG+ITPHT+F VYVL ++EGGR +PFFAGYRPQFY+RTTDVTG + + +D+ +E +MVMPGDRIKM VELI +A EQGMRFAIREGG+T+GAGV+ II+ Sbjct: 252 TVELIGLKDTRTTAVTGIEMFKKSLEEGLAGDNAGVLLRGLKKEDIERGMVIAKPGSITPHTQFEGEVYVLTEKEGGRKTPFFAGYRPQFYVRTTDVTGTIKAYTSDEGKEVEMVMPGDRIKMTVELINAIAIEQGMRFAIREGGRTIGAGVVSKIIK 409
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_ODOSI (Elongation factor Tu, chloroplastic OS=Odontella sinensis GN=tufA PE=3 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 1.349e-57 Identity = 105/158 (66.46%), Postives = 129/158 (81.65%), Query Frame = 3 Query: 3 TVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 TV++VG+ +T+ T+TG+EMFQKTLDE AGDNVG+LLRGV + DI+ GMVL++PGTITPHT F + VYVL K+EGGRH+PFF GYRPQFY+RTTDVTG ++ D +MVMPGDRIKM ELI PVA E+GMRFAIREGG+T+GAGV+ II+ Sbjct: 252 TVEIVGVGDTQTTTITGIEMFQKTLDEGFAGDNVGILLRGVTREDIEAGMVLSEPGTITPHTNFESEVYVLTKDEGGRHTPFFTGYRPQFYVRTTDVTGAITQFTADDGSIVEMVMPGDRIKMTAELIYPVAIEEGMRFAIREGGRTIGAGVVSKIIQ 409
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_MESVI (Elongation factor Tu, chloroplastic OS=Mesostigma viride GN=tufA PE=3 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 1.349e-57 Identity = 106/158 (67.09%), Postives = 132/158 (83.54%), Query Frame = 3 Query: 6 VDLVGLKET-RNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 VD+VGL +N TVTG+EMFQKTL+E++AGDNVG+LLRG+QK ++RGMVLAKP TI PH +F + VYVL KEEGGRH+PFF GYRPQFY+RTTDVTG++ S D +++MVMPGDR+KMVV LI P+A E+GMRFAIREGG+TVGAG++ I+E Sbjct: 253 VDIVGLANIPQNTTVTGLEMFQKTLEESVAGDNVGVLLRGIQKDQVERGMVLAKPNTIKPHIRFESEVYVLAKEEGGRHTPFFPGYRPQFYVRTTDVTGKIDSFKADDGSDTQMVMPGDRVKMVVSLIQPIAIEKGMRFAIREGGRTVGAGIVSEILE 410
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_SCEOB (Elongation factor Tu, chloroplastic OS=Scenedesmus obliquus GN=tufA PE=3 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 1.762e-57 Identity = 108/166 (65.06%), Postives = 136/166 (81.93%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMN---------DKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 V+L+GLK+T+ VTG+EMF+KTLDE MAGDNVG+LLRG+QK D++RGMVLAKPG+ITPHTKF A VYVL KEEGGRHSPF GY+PQF++RTTDVTG++ S + ++ +KM MPGDRI++ V+LI PVA E+GMRFAIREGG+TVGAGV+ +I+E Sbjct: 253 VELIGLKDTKATVVTGLEMFKKTLDETMAGDNVGVLLRGIQKKDVERGMVLAKPGSITPHTKFEAQVYVLTKEEGGRHSPFLVGYQPQFFIRTTDVTGKIVSFTHIQMKNPSSVAEEHSNKMAMPGDRIEVTVQLIYPVAVEKGMRFAIREGGRTVGAGVVTNILE 418
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_THAPS (Elongation factor Tu, chloroplastic OS=Thalassiosira pseudonana GN=tufA PE=3 SV=1) HSP 1 Score: 221.476 bits (563), Expect = 5.126e-57 Identity = 104/157 (66.24%), Postives = 128/157 (81.53%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 V++VG+ +T+ T+TG+EMFQKTL+E AGDNVG+LLRGV + +I+RGMVL+KPGTITPHT F + VYVL KEEGGRH+PFF GYRPQFY+RTTDVTG + D +MVMPGDRIKM ELI PVA E+GMRFAIREGG+T+GAGV+ I++ Sbjct: 253 VEIVGVGDTQTTTITGIEMFQKTLEEGFAGDNVGILLRGVTRENIERGMVLSKPGTITPHTNFESEVYVLTKEEGGRHTPFFTGYRPQFYVRTTDVTGSIEQFTADDGTIVEMVMPGDRIKMTAELIYPVAIEEGMRFAIREGGRTIGAGVVSKIVK 409
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_PHATR (Elongation factor Tu, chloroplastic OS=Phaeodactylum tricornutum GN=tufA PE=3 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 1.142e-56 Identity = 103/157 (65.61%), Postives = 127/157 (80.89%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 V++VG+ +T+ T+TG+EMFQKTL+E AGDNVG+LLRGV + +I+RGMVLAKPGTITPHT F + VYVL K+EGGRH+PFF GYRPQFY+RTTDVTG ++ D +MVMPGDRIKM E I PVA E GMRFAIREGG+T+GAGV+ I++ Sbjct: 253 VEIVGVTDTQTTTITGIEMFQKTLEEGFAGDNVGILLRGVTRENIERGMVLAKPGTITPHTSFESEVYVLTKDEGGRHTPFFTGYRPQFYVRTTDVTGSITQFTADDGSVVEMVMPGDRIKMTAEFIYPVAIEAGMRFAIREGGRTIGAGVVSKIVK 409
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_CHLRE (Elongation factor Tu, chloroplastic OS=Chlamydomonas reinhardtii GN=tufA PE=3 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 4.339e-56 Identity = 108/166 (65.06%), Postives = 132/166 (79.52%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMN---------DKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 V++VGL+ T+ VTG+EMF+KTLDE +AGDNVG+LLRGVQK DI+RGMV+AKPGTITPHTKF A VYVL KEEGGRHS F GY+PQFY+RTTDVTG+V + ++ +KM MPGDRI M VELI P+A E+GMRFAIREGG+TVGAGV+ +I++ Sbjct: 253 VEIVGLRPTQTAVVTGLEMFKKTLDETLAGDNVGVLLRGVQKKDIERGMVIAKPGTITPHTKFEAQVYVLTKEEGGRHSAFMIGYQPQFYVRTTDVTGKVVGFNHIQMRNPSSVAEEHSNKMAMPGDRISMTVELINPIAIEKGMRFAIREGGRTVGAGVVTNIVQ 418 The following BLAST results are available for this feature:
BLAST of DC900270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900270 ID=DC900270; Name=DC900270; organism=Citrus sinensis; type=EST; length=885bpback to top |