DC900270
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU1_ECOK1 (Elongation factor Tu 1 OS=Escherichia coli O1:K1 / APEC GN=tuf1 PE=3 SV=2) HSP 1 Score: 207.223 bits (526), Expect = 1.000e-52 Identity = 99/156 (63.46%), Postives = 125/156 (80.13%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 473 V++VG+KET+ T TGVEMF+K LDE AG+NVG+LLRG+++ +I+RG VLAKPGTI PHTKF + VY+L K+EGGRH+PFF GYRPQFY RTTDVTG + + E +MVMPGD IKMVV LI P+A + G+RFAIREGG+TVGAGV+ ++ Sbjct: 243 VEIVGIKETQKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVLAKPGTIKPHTKFESEVYILSKDEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIKMVVTLIHPIAMDDGLRFAIREGGRTVGAGVVAKVL 393
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU1_ECOHS (Elongation factor Tu 1 OS=Escherichia coli O9:H4 (strain HS) GN=tuf1 PE=3 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 1.000e-52 Identity = 99/156 (63.46%), Postives = 125/156 (80.13%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 473 V++VG+KET+ T TGVEMF+K LDE AG+NVG+LLRG+++ +I+RG VLAKPGTI PHTKF + VY+L K+EGGRH+PFF GYRPQFY RTTDVTG + + E +MVMPGD IKMVV LI P+A + G+RFAIREGG+TVGAGV+ ++ Sbjct: 243 VEIVGIKETQKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVLAKPGTIKPHTKFESEVYILSKDEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIKMVVTLIHPIAMDDGLRFAIREGGRTVGAGVVAKVL 393
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU1_ECO24 (Elongation factor Tu 1 OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=tuf1 PE=3 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 1.000e-52 Identity = 99/156 (63.46%), Postives = 125/156 (80.13%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 473 V++VG+KET+ T TGVEMF+K LDE AG+NVG+LLRG+++ +I+RG VLAKPGTI PHTKF + VY+L K+EGGRH+PFF GYRPQFY RTTDVTG + + E +MVMPGD IKMVV LI P+A + G+RFAIREGG+TVGAGV+ ++ Sbjct: 243 VEIVGIKETQKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVLAKPGTIKPHTKFESEVYILSKDEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIKMVVTLIHPIAMDDGLRFAIREGGRTVGAGVVAKVL 393
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_KLEP7 (Elongation factor Tu OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=tufA PE=3 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 1.307e-52 Identity = 99/156 (63.46%), Postives = 124/156 (79.49%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 473 V++VG+KET T TGVEMF+K LDE AG+NVG+LLRG+++ +I+RG VLAKPGTI PHTKF + VY+L K+EGGRH+PFF GYRPQFY RTTDVTG + + E +MVMPGD IKMVV LI P+A + G+RFAIREGG+TVGAGV+ ++ Sbjct: 243 VEIVGIKETAKTTCTGVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVLAKPGTINPHTKFESEVYILSKDEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIKMVVTLIHPIAMDDGLRFAIREGGRTVGAGVVAKVL 393
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_FLESI (Elongation factor Tu OS=Flexistipes sinusarabici GN=tuf PE=3 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 1.307e-52 Identity = 100/157 (63.69%), Postives = 123/157 (78.34%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 +++VGL +TR VTGVEMF+K LDE AGDNVG+LLRG++K D++RG VLAKPG+ITPH KF Y+L KEEGGRH+PFF+GYRPQFY RTTDVTG ++ E +MVMPGD I V+LI P+A EQG+RFAIREGG+TVGAGV+ I+E Sbjct: 245 IEIVGLTDTRKTVVTGVEMFRKILDEGEAGDNVGVLLRGIKKDDVERGQVLAKPGSITPHRKFKCEAYILTKEEGGRHTPFFSGYRPQFYFRTTDVTGVITLA-----EGVEMVMPGDNISCDVDLIQPIAMEQGLRFAIREGGRTVGAGVVTEIVE 396
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_DEIRA (Elongation factor Tu OS=Deinococcus radiodurans GN=tufA PE=3 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 1.307e-52 Identity = 101/157 (64.33%), Postives = 122/157 (77.71%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 V++VGL +TR TVTG+EM +K LD MAGDNVG+LLRGV + D++RG VLAKPG+I PHTKF A VYVL K+EGGRHS FF GYRPQFY RTTDVTG V + E +MVMPGD + VELI P+A E+G+RFAIREGG+TVGAGV+ ++E Sbjct: 254 VEIVGLTDTRKTTVTGIEMHRKLLDSGMAGDNVGVLLRGVARDDVERGQVLAKPGSIKPHTKFEASVYVLSKDEGGRHSAFFGGYRPQFYFRTTDVTGVV-----ELQEGVEMVMPGDNVTFTVELIKPIAMEEGLRFAIREGGRTVGAGVVSKVLE 405
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_ARCB4 (Elongation factor Tu OS=Arcobacter butzleri (strain RM4018) GN=tuf PE=3 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 1.307e-52 Identity = 96/156 (61.54%), Postives = 124/156 (79.49%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 473 +++VG +TR TVTGVEMF+K +D+ AGDN G+LLRG++K D++RG VL KPGTITPHTKF VY+L KEEGGRH+PFF+GYRPQFY+RTTDVTG + E ++MVMPGD ++M VEL+ P+A ++G +FAIREGG+TVGAGV+ II Sbjct: 251 IEIVGFGDTRKTTVTGVEMFRKEMDQGQAGDNCGILLRGIKKEDVERGQVLVKPGTITPHTKFRCEVYILSKEEGGRHTPFFSGYRPQFYVRTTDVTGSCT-----LPEGTEMVMPGDNVEMTVELVAPIALDKGTKFAIREGGRTVGAGVVAEII 401
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU1_YERE8 (Elongation factor Tu 1 OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=tuf1 PE=3 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 1.307e-52 Identity = 99/157 (63.06%), Postives = 125/157 (79.62%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 V++VGLK+T T TGVEMF+K LDE AG+NVG+LLRG+++ DI+RG VLAKPG+I PHTKF + VY+L K+EGGRH+PFF GYRPQFY RTTDVTG + + E +MVMPGD I+M+V LI P+A + G+RFAIREGG+TVGAGV+ +IE Sbjct: 243 VEIVGLKDTVKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREDIERGQVLAKPGSIKPHTKFESEVYILSKDEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIQMIVNLIAPIAMDDGLRFAIREGGRTVGAGVVAKVIE 394
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_NITMU (Elongation factor Tu OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=tuf1 PE=3 SV=1) HSP 1 Score: 206.453 bits (524), Expect = 1.706e-52 Identity = 98/157 (62.42%), Postives = 122/157 (77.71%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 +++VGLK T TGVEMF+K LD+ AGDNVG+LLRG ++ +++RG VLAKPGTITPHTKF A +YVL KEEGGRH+PFF GYRPQFY RTTDVTG + + ++MVMPGD + + V LI P+A E+G+RFAIREGG+TVGAGV+ IIE Sbjct: 245 IEIVGLKPTTKTVCTGVEMFRKLLDQGQAGDNVGVLLRGTKREEVERGQVLAKPGTITPHTKFTAEIYVLSKEEGGRHTPFFQGYRPQFYFRTTDVTGAI-----ELPAGTEMVMPGDNVSVTVNLIAPIAMEEGLRFAIREGGRTVGAGVVAKIIE 396
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU2_PASMU (Elongation factor Tu-B OS=Pasteurella multocida GN=tufB PE=3 SV=1) HSP 1 Score: 206.453 bits (524), Expect = 1.706e-52 Identity = 102/157 (64.97%), Postives = 123/157 (78.34%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 V++VG+K T TVTGVEMF+K LDE AG+NVG LLRG ++ +I+RG VLAKPG+ITPHT F + VYVL KEEGGRH+PFF GYRPQFY RTTDVTG + + E +MVMPGD IKM V LI P+A +QG+RFAIREGG+TVGAGV+ II+ Sbjct: 243 VEIVGIKATTKTTVTGVEMFRKLLDEGRAGENVGALLRGTKREEIERGQVLAKPGSITPHTDFESEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIKMTVSLIHPIAMDQGLRFAIREGGRTVGAGVVAKIIK 394 The following BLAST results are available for this feature:
BLAST of DC900270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900270 ID=DC900270; Name=DC900270; organism=Citrus sinensis; type=EST; length=885bpback to top |