DC900270
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU1_YERP3 (Elongation factor Tu 1 OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=tuf1 PE=3 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 4.203e-51 Identity = 97/157 (61.78%), Postives = 122/157 (77.71%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 V++VG+ +T T TGVEMF+K LDE AG+NVG+LLRG ++ D+QRG VLAKPG+I PHTKF + VY+L K+EGGRH+PFF GYRPQFY RTTDVTG + + E +MVMPGD + MVV LI P+A + G+RFAIREGG+TVGAGV+ +IE Sbjct: 243 VEIVGIIDTIKTTCTGVEMFRKLLDEGRAGENVGVLLRGTKRDDVQRGQVLAKPGSIKPHTKFESEVYILSKDEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNVNMVVNLIAPIAMDDGLRFAIREGGRTVGAGVVAKVIE 394
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_THICR (Elongation factor Tu OS=Thiomicrospira crunogena (strain XCL-2) GN=tuf1 PE=3 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 5.489e-51 Identity = 97/157 (61.78%), Postives = 122/157 (77.71%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 +++VG++ T TVTGVEMF+K LD+ AGDNVG+LLRG ++ DI+RG VLA GT+TPHTKF A VYVL K+EGGRH+PFF GYRPQFY RTTDVTG + ++MVMPGD ++M VELI P+A +G+RFAIREGG+TVGAGV+ II+ Sbjct: 245 IEIVGIRPTTTTTVTGVEMFRKLLDQGEAGDNVGILLRGTKREDIERGQVLAHKGTVTPHTKFEAEVYVLSKDEGGRHTPFFQGYRPQFYFRTTDVTGAC-----ELPAGTEMVMPGDNVQMTVELINPIAMNEGLRFAIREGGRTVGAGVVAKIID 396
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_THELT (Elongation factor Tu OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=tuf PE=3 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 5.489e-51 Identity = 100/158 (63.29%), Postives = 124/158 (78.48%), Query Frame = 3 Query: 6 VDLVGLK-ETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 V++VGL ETR VT VEMF+K LDE +AGDNVG LLRG+ K +I+RG VLA PG+ITPHT F A VYVLKKEEGGRH+PF GYRPQF++RT DVTG ++ + N+ ++MVMPGD + ++LI PVA E+GMRFAIREGG+TVGAGV+ I+E Sbjct: 246 VEIVGLSYETRKTVVTSVEMFRKELDEGLAGDNVGCLLRGIDKDEIERGQVLAAPGSITPHTTFKANVYVLKKEEGGRHTPFMKGYRPQFFIRTADVTGEITELGNN----AEMVMPGDNAILTIKLIYPVAIEKGMRFAIREGGRTVGAGVVAEIVE 399
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_STAAW (Elongation factor Tu OS=Staphylococcus aureus (strain MW2) GN=tuf PE=3 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 5.489e-51 Identity = 99/157 (63.06%), Postives = 122/157 (77.71%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 V+++GL +T TVTGVEMF+K LD A AGDN+G LLRGV + D+QRG VLA PG+ITPHT+F A VYVL K+EGGRH+PFF+ YRPQFY RTTDVTG V E ++MVMPGD ++M VELI P+A E G RF+IREGG+TVG+GV+ II+ Sbjct: 243 VEIIGLHDTSKTTVTGVEMFRKLLDYAEAGDNIGALLRGVAREDVQRGQVLAAPGSITPHTEFKAEVYVLSKDEGGRHTPFFSNYRPQFYFRTTDVTGVV-----HLPEGTEMVMPGDNVEMTVELIAPIAIEDGTRFSIREGGRTVGSGVVTEIIK 394
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_STAAT (Elongation factor Tu OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=tuf PE=3 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 5.489e-51 Identity = 99/157 (63.06%), Postives = 122/157 (77.71%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 V+++GL +T TVTGVEMF+K LD A AGDN+G LLRGV + D+QRG VLA PG+ITPHT+F A VYVL K+EGGRH+PFF+ YRPQFY RTTDVTG V E ++MVMPGD ++M VELI P+A E G RF+IREGG+TVG+GV+ II+ Sbjct: 243 VEIIGLHDTSKTTVTGVEMFRKLLDYAEAGDNIGALLRGVAREDVQRGQVLAAPGSITPHTEFKAEVYVLSKDEGGRHTPFFSNYRPQFYFRTTDVTGVV-----HLPEGTEMVMPGDNVEMTVELIAPIAIEDGTRFSIREGGRTVGSGVVTEIIK 394
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_STAAS (Elongation factor Tu OS=Staphylococcus aureus (strain MSSA476) GN=tuf PE=3 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 5.489e-51 Identity = 99/157 (63.06%), Postives = 122/157 (77.71%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 V+++GL +T TVTGVEMF+K LD A AGDN+G LLRGV + D+QRG VLA PG+ITPHT+F A VYVL K+EGGRH+PFF+ YRPQFY RTTDVTG V E ++MVMPGD ++M VELI P+A E G RF+IREGG+TVG+GV+ II+ Sbjct: 243 VEIIGLHDTSKTTVTGVEMFRKLLDYAEAGDNIGALLRGVAREDVQRGQVLAAPGSITPHTEFKAEVYVLSKDEGGRHTPFFSNYRPQFYFRTTDVTGVV-----HLPEGTEMVMPGDNVEMTVELIAPIAIEDGTRFSIREGGRTVGSGVVTEIIK 394
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_STAAR (Elongation factor Tu OS=Staphylococcus aureus (strain MRSA252) GN=tuf PE=3 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 5.489e-51 Identity = 99/157 (63.06%), Postives = 122/157 (77.71%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 V+++GL +T TVTGVEMF+K LD A AGDN+G LLRGV + D+QRG VLA PG+ITPHT+F A VYVL K+EGGRH+PFF+ YRPQFY RTTDVTG V E ++MVMPGD ++M VELI P+A E G RF+IREGG+TVG+GV+ II+ Sbjct: 243 VEIIGLHDTSKTTVTGVEMFRKLLDYAEAGDNIGALLRGVAREDVQRGQVLAAPGSITPHTEFKAEVYVLSKDEGGRHTPFFSNYRPQFYFRTTDVTGVV-----HLPEGTEMVMPGDNVEMTVELIAPIAIEDGTRFSIREGGRTVGSGVVTEIIK 394
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_STAAN (Elongation factor Tu OS=Staphylococcus aureus (strain N315) GN=tuf PE=1 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 5.489e-51 Identity = 99/157 (63.06%), Postives = 122/157 (77.71%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 V+++GL +T TVTGVEMF+K LD A AGDN+G LLRGV + D+QRG VLA PG+ITPHT+F A VYVL K+EGGRH+PFF+ YRPQFY RTTDVTG V E ++MVMPGD ++M VELI P+A E G RF+IREGG+TVG+GV+ II+ Sbjct: 243 VEIIGLHDTSKTTVTGVEMFRKLLDYAEAGDNIGALLRGVAREDVQRGQVLAAPGSITPHTEFKAEVYVLSKDEGGRHTPFFSNYRPQFYFRTTDVTGVV-----HLPEGTEMVMPGDNVEMTVELIAPIAIEDGTRFSIREGGRTVGSGVVTEIIK 394
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_STAAM (Elongation factor Tu OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=tuf PE=1 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 5.489e-51 Identity = 99/157 (63.06%), Postives = 122/157 (77.71%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 V+++GL +T TVTGVEMF+K LD A AGDN+G LLRGV + D+QRG VLA PG+ITPHT+F A VYVL K+EGGRH+PFF+ YRPQFY RTTDVTG V E ++MVMPGD ++M VELI P+A E G RF+IREGG+TVG+GV+ II+ Sbjct: 243 VEIIGLHDTSKTTVTGVEMFRKLLDYAEAGDNIGALLRGVAREDVQRGQVLAAPGSITPHTEFKAEVYVLSKDEGGRHTPFFSNYRPQFYFRTTDVTGVV-----HLPEGTEMVMPGDNVEMTVELIAPIAIEDGTRFSIREGGRTVGSGVVTEIIK 394
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_STAAE (Elongation factor Tu OS=Staphylococcus aureus (strain Newman) GN=tuf PE=3 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 5.489e-51 Identity = 99/157 (63.06%), Postives = 122/157 (77.71%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 V+++GL +T TVTGVEMF+K LD A AGDN+G LLRGV + D+QRG VLA PG+ITPHT+F A VYVL K+EGGRH+PFF+ YRPQFY RTTDVTG V E ++MVMPGD ++M VELI P+A E G RF+IREGG+TVG+GV+ II+ Sbjct: 243 VEIIGLHDTSKTTVTGVEMFRKLLDYAEAGDNIGALLRGVAREDVQRGQVLAAPGSITPHTEFKAEVYVLSKDEGGRHTPFFSNYRPQFYFRTTDVTGVV-----HLPEGTEMVMPGDNVEMTVELIAPIAIEDGTRFSIREGGRTVGSGVVTEIIK 394 The following BLAST results are available for this feature:
BLAST of DC900270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900270 ID=DC900270; Name=DC900270; organism=Citrus sinensis; type=EST; length=885bpback to top |