DC900270
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_CLOAB (Elongation factor Tu OS=Clostridium acetobutylicum GN=tuf PE=3 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 5.489e-51 Identity = 103/158 (65.19%), Postives = 121/158 (76.58%), Query Frame = 3 Query: 6 VDLVGLK-ETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 V++VG+K E VTGVEMF+K LD A+AGDN+G LLRGVQ+ DI+RG VLAKPG+ITPH KF+ VYVLKKEEGGRH+PFF GYRPQFY RTTDVTG + + +MVMPGD I M VELI VA +RFAIREGG+TVG+GV+ SIIE Sbjct: 245 VEIVGMKDEITKVVVTGVEMFRKILDSALAGDNIGALLRGVQREDIERGQVLAKPGSITPHNKFVGQVYVLKKEEGGRHTPFFNGYRPQFYFRTTDVTGSI-----QLPDGVEMVMPGDHIDMTVELITKVAMGDNLRFAIREGGRTVGSGVVTSIIE 397
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU2_PHOPR (Elongation factor Tu 2 OS=Photobacterium profundum GN=tuf2 PE=3 SV=2) HSP 1 Score: 201.445 bits (511), Expect = 5.489e-51 Identity = 97/157 (61.78%), Postives = 122/157 (77.71%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 V ++G+KET T TGVEMF+K LDE AG+NVG+LLRG ++ D++RG VLAKPG+ITPHT F + +YVL K+EGGRH+PFF GYRPQFY RTTDVTG + + E +MVMPGD I+M V LI P+A ++G+RFAIREGG+TVGAGV+ I E Sbjct: 243 VAIIGIKETTTTTCTGVEMFRKLLDEGRAGENVGVLLRGTKRDDVERGQVLAKPGSITPHTTFESEIYVLSKDEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIQMKVTLIAPIAMDEGLRFAIREGGRTVGAGVVAKIFE 394
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_TERTT (Elongation factor Tu OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=tuf PE=3 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 7.169e-51 Identity = 98/157 (62.42%), Postives = 121/157 (77.07%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 +++VG+ T T TGVEMF+K LDE AG+NVG+LLRG ++ +++RG VLAKPGTITPHT F + VYVL K+EGGRH+PFF GYRPQFY RTTDVTG + E +MVMPGD I+M V LI P+A E+G+RFAIREGG+TVGAGV+ IIE Sbjct: 256 IEIVGINATTKTTCTGVEMFRKLLDEGRAGENVGVLLRGTKRDEVERGQVLAKPGTITPHTVFQSEVYVLSKDEGGRHTPFFKGYRPQFYFRTTDVTGAC-----ELPEGVEMVMPGDNIQMTVTLIAPIAMEEGLRFAIREGGRTVGAGVVAKIIE 407
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_SULDN (Elongation factor Tu OS=Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) GN=tuf PE=3 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 7.169e-51 Identity = 92/156 (58.97%), Postives = 123/156 (78.85%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 473 +++VG+++T+ TVTG+EMF+K +D+ +AGDN G+L+RG+ K D++RG VL KPGTI PHTKF A +YVL KEEGGRH+PFF YRPQFY+RTTDVTG + E ++MVMPGD + + VELI P+A E+G +FAIREGG+TVGAGV+ I+ Sbjct: 248 IEIVGIRDTQKTTVTGIEMFRKEMDQGLAGDNCGVLVRGIGKDDVERGQVLCKPGTINPHTKFTAEIYVLSKEEGGRHTPFFTNYRPQFYVRTTDVTGAIY-----LPEGTEMVMPGDNVSITVELIHPIAMEKGTKFAIREGGRTVGAGVVAEIL 398
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_SHEPU (Elongation factor Tu OS=Shewanella putrefaciens GN=tuf PE=3 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 7.169e-51 Identity = 98/156 (62.82%), Postives = 121/156 (77.56%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 473 V++VG++ T T TGVEMF+K LDE AG+N G+LLRG ++ D++RG VLAKPG+I PHT F + VYVL KEEGGRH+PFF GYRPQFY RTTDVTG + + E +MVMPGD IKMVV LI P+A ++G+RFAIREGG+TVGAGV+ II Sbjct: 243 VEIVGVRATTKTTCTGVEMFRKLLDEGRAGENCGILLRGTKRDDVERGQVLAKPGSINPHTTFESEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIKMVVTLICPIAMDEGLRFAIREGGRTVGAGVVAKII 393
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_SHEPC (Elongation factor Tu OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=tuf1 PE=3 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 7.169e-51 Identity = 98/156 (62.82%), Postives = 121/156 (77.56%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 473 V++VG++ T T TGVEMF+K LDE AG+N G+LLRG ++ D++RG VLAKPG+I PHT F + VYVL KEEGGRH+PFF GYRPQFY RTTDVTG + + E +MVMPGD IKMVV LI P+A ++G+RFAIREGG+TVGAGV+ II Sbjct: 243 VEIVGVRATTKTTCTGVEMFRKLLDEGRAGENCGILLRGTKRDDVERGQVLAKPGSINPHTTFESEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIKMVVTLICPIAMDEGLRFAIREGGRTVGAGVVAKII 393
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_METPP (Elongation factor Tu OS=Methylibium petroleiphilum (strain PM1) GN=tuf1 PE=3 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 7.169e-51 Identity = 94/157 (59.87%), Postives = 121/157 (77.07%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 +++VG+ T+ T TGVEMF+K LD+ AGDNVG+LLRG ++ D+QRG VL KPG++ PHT F A +YVL KEEGGRH+PFF YRPQFY RTTDVTG V + ++ +MVMPGD + + V+LI P+A E+G+RFAIREGG+TVGAGV+ IIE Sbjct: 245 IEIVGISATQKTTCTGVEMFRKLLDQGQAGDNVGILLRGTKREDVQRGQVLCKPGSVKPHTHFTAEIYVLSKEEGGRHTPFFNNYRPQFYFRTTDVTGAV-----ELPKDKEMVMPGDNVSITVKLINPIAMEEGLRFAIREGGRTVGAGVVAKIIE 396
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_MAGSA (Elongation factor Tu OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=tuf1 PE=3 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 7.169e-51 Identity = 97/157 (61.78%), Postives = 121/157 (77.07%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 V++VG+K T T TGVEMF+K LD+ AGDN+G LLRG ++ D++RG VLA PG+ITPHT F A Y+L KEEGGRH+PFF YRPQFY RTTDVTG V+ E ++MVMPGD +KM+V LI P+A +QG+RFAIREGG+TVGAGV+ II+ Sbjct: 245 VEIVGIKNTVKTTCTGVEMFRKLLDQGEAGDNIGALLRGTKREDVERGQVLAAPGSITPHTDFEAEAYILNKEEGGRHTPFFTNYRPQFYFRTTDVTGVVA-----LPEGTEMVMPGDNVKMIVTLIAPIAMDQGLRFAIREGGRTVGAGVVAKIIK 396
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_FRAAA (Elongation factor Tu OS=Frankia alni (strain ACN14a) GN=tuf PE=3 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 7.169e-51 Identity = 99/159 (62.26%), Postives = 124/159 (77.99%), Query Frame = 3 Query: 3 TVDLVGLK-ETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 TV++VG+K ET TVTGVEMF+K LDE AGDNVGLLLRG+++ D++RG V+ KP TITPHT F A VY+L K+EGGRH+PFF YRPQFY RTTDVTG V+ E ++MVMPGD +M VELI P+A E+G+RFAIREGG+TVGAG + +++ Sbjct: 244 TVEIVGIKPETTTTTVTGVEMFRKLLDEGRAGDNVGLLLRGIKREDVERGQVIVKPKTITPHTVFEARVYILNKDEGGRHTPFFKNYRPQFYFRTTDVTGVVT-----LPEGTEMVMPGDNTEMTVELIQPIAMEEGLRFAIREGGRTVGAGQVTKVLK 397
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU2_YERE8 (Elongation factor Tu 2 OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=tuf2 PE=3 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 7.169e-51 Identity = 97/156 (62.18%), Postives = 122/156 (78.21%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 473 V++VG+K+T T TGVEMF+K LDE AG+NVG+LLRG+++ DI+RG VLAKPG+I PHT F + VY+L K+EGGRH+PFF GYRPQFY RTTDVTG + + E +MVMPGD I MVV LI P+A + G+RFAIREGG+TVGAGV+ +I Sbjct: 243 VEIVGIKDTVKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREDIERGQVLAKPGSIKPHTTFESEVYILSKDEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNINMVVTLIHPIAMDDGLRFAIREGGRTVGAGVVAKVI 393 The following BLAST results are available for this feature:
BLAST of DC900270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900270 ID=DC900270; Name=DC900270; organism=Citrus sinensis; type=EST; length=885bpback to top |