DC900270
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU2_SHEB9 (Elongation factor Tu 2 OS=Shewanella baltica (strain OS195) GN=tuf2 PE=3 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 9.363e-51 Identity = 98/156 (62.82%), Postives = 121/156 (77.56%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 473 V++VG++ T T TGVEMF+K LDE AG+N G+LLRG ++ D++RG VLAKPG+I PHT F + VYVL KEEGGRH+PFF GYRPQFY RTTDVTG + + E +MVMPGD IKMVV LI P+A ++G+RFAIREGG+TVGAGV+ II Sbjct: 243 VEIVGVRTTTKTTCTGVEMFRKLLDEGRAGENCGVLLRGTKRDDVERGQVLAKPGSINPHTTFESEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIKMVVTLICPIAMDEGLRFAIREGGRTVGAGVVAKII 393
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU2_SHEB5 (Elongation factor Tu 2 OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=tuf2 PE=3 SV=2) HSP 1 Score: 200.675 bits (509), Expect = 9.363e-51 Identity = 98/156 (62.82%), Postives = 121/156 (77.56%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 473 V++VG++ T T TGVEMF+K LDE AG+N G+LLRG ++ D++RG VLAKPG+I PHT F + VYVL KEEGGRH+PFF GYRPQFY RTTDVTG + + E +MVMPGD IKMVV LI P+A ++G+RFAIREGG+TVGAGV+ II Sbjct: 243 VEIVGVRTTTKTTCTGVEMFRKLLDEGRAGENCGVLLRGTKRDDVERGQVLAKPGSINPHTTFESEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIKMVVTLICPIAMDEGLRFAIREGGRTVGAGVVAKII 393
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU2_CARHZ (Elongation factor Tu 2 OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=tuf2 PE=3 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 9.363e-51 Identity = 101/158 (63.92%), Postives = 123/158 (77.85%), Query Frame = 3 Query: 6 VDLVGLKET-RNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 V++VGL + R VTG+EMF+K LDEA+AGDN+G LLRGV + +I+RG VLAKPGTI PH KF A VYVL KEEGGRH+PFF GYRPQFY RTTDVTG + E +MVMPGD +K+ +ELI P+A E+G+RFAIREGG+TVGAGV+ +I E Sbjct: 248 VEIVGLMDAPRKTVVTGLEMFRKVLDEAVAGDNIGALLRGVDRKEIERGQVLAKPGTIKPHRKFFAEVYVLTKEEGGRHTPFFNGYRPQFYFRTTDVTGVI-----HLPEGVEMVMPGDNVKIHIELITPIAIEEGLRFAIREGGRTVGAGVVTAIEE 400
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU1_YERPP (Elongation factor Tu 1 OS=Yersinia pestis (strain Pestoides F) GN=tuf1 PE=3 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 9.363e-51 Identity = 96/156 (61.54%), Postives = 122/156 (78.21%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 473 V++VG+K+T T TGVEMF+K LDE AG+NVG+LLRG+++ DI+RG VLAKPG+I PHT F + VY+L K+EGGRH+PFF GYRPQFY RTTDVTG + + E +MVMPGD I M+V LI P+A + G+RFAIREGG+TVGAGV+ +I Sbjct: 243 VEIVGIKDTVKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREDIERGQVLAKPGSIKPHTTFESEVYILSKDEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNINMIVTLIHPIAMDDGLRFAIREGGRTVGAGVVAKVI 393
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU1_YERPE (Elongation factor Tu-A OS=Yersinia pestis GN=tufA PE=3 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 9.363e-51 Identity = 96/156 (61.54%), Postives = 122/156 (78.21%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 473 V++VG+K+T T TGVEMF+K LDE AG+NVG+LLRG+++ DI+RG VLAKPG+I PHT F + VY+L K+EGGRH+PFF GYRPQFY RTTDVTG + + E +MVMPGD I M+V LI P+A + G+RFAIREGG+TVGAGV+ +I Sbjct: 243 VEIVGIKDTVKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREDIERGQVLAKPGSIKPHTTFESEVYILSKDEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNINMIVTLIHPIAMDDGLRFAIREGGRTVGAGVVAKVI 393
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU1_YERPA (Elongation factor Tu 1 OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=tuf1 PE=3 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 9.363e-51 Identity = 96/156 (61.54%), Postives = 122/156 (78.21%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 473 V++VG+K+T T TGVEMF+K LDE AG+NVG+LLRG+++ DI+RG VLAKPG+I PHT F + VY+L K+EGGRH+PFF GYRPQFY RTTDVTG + + E +MVMPGD I M+V LI P+A + G+RFAIREGG+TVGAGV+ +I Sbjct: 243 VEIVGIKDTVKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREDIERGQVLAKPGSIKPHTTFESEVYILSKDEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNINMIVTLIHPIAMDDGLRFAIREGGRTVGAGVVAKVI 393
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU1_SHEB9 (Elongation factor Tu 1 OS=Shewanella baltica (strain OS195) GN=tuf1 PE=3 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 9.363e-51 Identity = 98/156 (62.82%), Postives = 121/156 (77.56%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 473 V++VG++ T T TGVEMF+K LDE AG+N G+LLRG ++ D++RG VLAKPG+I PHT F + VYVL KEEGGRH+PFF GYRPQFY RTTDVTG + + E +MVMPGD IKMVV LI P+A ++G+RFAIREGG+TVGAGV+ II Sbjct: 243 VEIVGVRTTTKTTCTGVEMFRKLLDEGRAGENCGVLLRGTKRDDVERGQVLAKPGSINPHTTFESEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIKMVVTLICPIAMDEGLRFAIREGGRTVGAGVVAKII 393
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU1_SHEB5 (Elongation factor Tu 1 OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=tuf1 PE=3 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 9.363e-51 Identity = 98/156 (62.82%), Postives = 121/156 (77.56%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 473 V++VG++ T T TGVEMF+K LDE AG+N G+LLRG ++ D++RG VLAKPG+I PHT F + VYVL KEEGGRH+PFF GYRPQFY RTTDVTG + + E +MVMPGD IKMVV LI P+A ++G+RFAIREGG+TVGAGV+ II Sbjct: 243 VEIVGVRTTTKTTCTGVEMFRKLLDEGRAGENCGVLLRGTKRDDVERGQVLAKPGSINPHTTFESEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIKMVVTLICPIAMDEGLRFAIREGGRTVGAGVVAKII 393
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU1_CARHZ (Elongation factor Tu 1 OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=tuf1 PE=3 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 9.363e-51 Identity = 101/158 (63.92%), Postives = 123/158 (77.85%), Query Frame = 3 Query: 6 VDLVGLKET-RNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 V++VGL + R VTG+EMF+K LDEA+AGDN+G LLRGV + +I+RG VLAKPGTI PH KF A VYVL KEEGGRH+PFF GYRPQFY RTTDVTG + E +MVMPGD +K+ +ELI P+A E+G+RFAIREGG+TVGAGV+ +I E Sbjct: 248 VEIVGLMDAPRKTVVTGLEMFRKVLDEAVAGDNIGALLRGVDRKEIERGQVLAKPGTIKPHRKFFAEVYVLTKEEGGRHTPFFNGYRPQFYFRTTDVTGVI-----HLPEGVEMVMPGDNVKIHIELITPIAIEEGLRFAIREGGRTVGAGVVTAIEE 400
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_SILST (Elongation factor Tu OS=Silicibacter sp. (strain TM1040) GN=tuf1 PE=3 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 1.223e-50 Identity = 95/156 (60.90%), Postives = 119/156 (76.28%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 473 +++VG+K+T T TGVEMF+K LD AGDN+G LLRG+ + ++RG VL KPG++TPHTKF A Y+L KEEGGRH+PFFA YRPQFY RTTDVTG V+ E ++MVMPGD +K VELI P+A E G+RFAIREGG+TVGAGV+ I+ Sbjct: 240 IEIVGIKDTTTTTCTGVEMFRKLLDRGEAGDNIGALLRGIDREAVERGQVLCKPGSVTPHTKFEAEAYILTKEEGGRHTPFFANYRPQFYFRTTDVTGTVT-----LPEGTEMVMPGDNLKFEVELIAPIAMEDGLRFAIREGGRTVGAGVVSKIL 390 The following BLAST results are available for this feature:
BLAST of DC900270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900270 ID=DC900270; Name=DC900270; organism=Citrus sinensis; type=EST; length=885bpback to top |